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The map label for this gene is rmpM

Identifier: 161870687

GI number: 161870687

Start: 1811500

End: 1812228

Strand: Reverse

Name: rmpM

Synonym: NMCC_1759

Alternate gene names: 161870687

Gene position: 1812228-1811500 (Counterclockwise)

Preceding gene: 161870689

Following gene: 161870686

Centisome position: 84.16

GC content: 52.54

Gene sequence:

>729_bases
ATGACCAAACAGCTGAAATTAAGCGCATTATTCGTTGCATTGCTCGCTTCCGGCACTGCTGTTGCGGGCGAGGCGTCCGT
TCAGGGTTACACCGTAAGCGGCCAGTCGAACGAAATCGTACGCAACAACTATGGCGAATGCTGGAAAAACGCCTACTTTG
ATAAAGCAAGCCAAGGTCGCGTAGAATGCGGCGATGCGGTTGCTGCCCCCGAACCCGAGCCAGAACCCGAACCCGCACCC
GCGCCTGTCGTCGTTGTGGAGCAGGCTCCGCAATATGTTGATGAAACCATTTCCCTGTCTGCCAAAACCCTGTTCGGTTT
CGATAAGGATTCATTGCGCGCCGAAGCTCAAGACAACCTGAAAGTATTGGCGCAACGCCTGGGTCAAACCAATATCCAAT
CTGTCCGCGTCGAAGGCCATACCGACTTTATGGGTTCTGACAAATACAATCAGGCCCTGTCCGAACGCCGCGCATACGTA
GTGGCAAACAACCTGGTCAGCAACGGCGTACCTGTTTCTAGAATTTCTGCTGTTGGCTTGGGCGAATCTCAAGCGCAAAT
GACTCAAGTTTGTGAAGCCGAAGTTGCCAAACTGGGTGCGAAAGTCTCTAAAGCCAAAAAACGTGAGGCTCTGATTGCAT
GTATCGAACCTGACCGCCGTGTGGATGTGAAAATCCGCAGCATCGTAACCCGTCAGGTTGTGCCGGCACACAATCATCAC
CAACACTAA

Upstream 100 bases:

>100_bases
TGAAATATCCGATTTGCCGCCATGTTTCTACAGCGGCCTGTATGTTGGCAATTCAGCAGTTGCTTCTGTATCTGCTGTAC
AAATTTAATGAGGGAATAAA

Downstream 100 bases:

>100_bases
GGCTAGGCAATATCTTGCCGATGCATGAGGTTAGCGGATTTTGTACCGGGTACTGTTGCAATATTCGTGAAACGTCGGTC
GGCATCGATGATGTGAAACA

Product: outer membrane protein class 4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNYGECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAP
APVVVVEQAPQYVDETISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYV
VANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRRVDVKIRSIVTRQVVPAHNHH
QH

Sequences:

>Translated_242_residues
MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNYGECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAP
APVVVVEQAPQYVDETISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYV
VANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRRVDVKIRSIVTRQVVPAHNHH
QH
>Mature_241_residues
TKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNYGECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAPA
PVVVVEQAPQYVDETISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYVV
ANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRRVDVKIRSIVTRQVVPAHNHHQ
H

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain

Homologues:

Organism=Escherichia coli, GI1787191, Length=134, Percent_Identity=40.2985074626866, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788957, Length=90, Percent_Identity=36.6666666666667, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): OMP4_NEIMA (P0A0V2)

Other databases:

- EMBL:   AL157959
- PIR:   A81782
- RefSeq:   YP_002343357.1
- PDB:   1R1M
- PDBsum:   1R1M
- ProteinModelPortal:   P0A0V2
- SMR:   P0A0V2
- EnsemblBacteria:   EBNEIT00000000352
- GeneID:   907339
- GenomeReviews:   AL157959_GR
- KEGG:   nma:NMA2105
- GeneTree:   EBGT00050000021679
- HOGENOM:   HBG751251
- OMA:   KGVEANR
- ProtClustDB:   CLSK877527
- BioCyc:   NMEN122587:NMA2105-MONOMER
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- Gene3D:   G3DSA:3.30.1330.60
- PRINTS:   PR01021

Pfam domain/function: PF00691 OmpA; SSF103088 OmpA/MotB_C

EC number: NA

Molecular weight: Translated: 26141; Mature: 26010

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS01068 OMPA_1; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNYGECWKNAYFDKASQGR
CCCCHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCHHHCCHHHHHHHHHCCCCCCCC
VECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAKTLFGFDKDSLRAEAQDNL
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHH
KVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSRISAVGL
HHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEEHHHHHCCCCHHHHHCCCC
GESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRRVDVKIRSIVTRQVVPAHNHH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
QH
CC
>Mature Secondary Structure 
TKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNYGECWKNAYFDKASQGR
CCCHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCHHHCCHHHHHHHHHCCCCCCCC
VECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAKTLFGFDKDSLRAEAQDNL
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHH
KVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSRISAVGL
HHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEEHHHHHCCCCHHHHHCCCC
GESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRRVDVKIRSIVTRQVVPAHNHH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
QH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919