Definition | Neisseria meningitidis 053442, complete genome. |
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Accession | NC_010120 |
Length | 2,153,416 |
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The map label for this gene is 161869840
Identifier: 161869840
GI number: 161869840
Start: 873456
End: 874583
Strand: Reverse
Name: 161869840
Synonym: NMCC_0871
Alternate gene names: NA
Gene position: 874583-873456 (Counterclockwise)
Preceding gene: 161869841
Following gene: 161869837
Centisome position: 40.61
GC content: 58.07
Gene sequence:
>1128_bases ATGACCCATATCAAACCCGTCATTGCCGCGCTCGCACTCATCGGGCTTGCCGCCTGCTCCGGCAGCAAAACCGAACAGCC CAAGCTCGACTACCAAAGCCGGTCGCACCGCCTGATCAAACTCGAAGTCCCACCTGATTTGAACAACCCCGACCAAGGCA ACCTCTACCGCCTGCCTGCCGGTTCGGGAGCCGTCCGCGCCAGCGATTTGGAAAAACGCCGCACACCCGCCGTCCAACAG CCTGCCGATGCCGAAGTATTGAAAAGCGTCAAAGGTGTCCGCCTCGAGCGCGACGGCAGCCAACGTTGGCTTGTCGTTGA CGGCAAATCCCCTGCCGAAATCTGGCCGCTTCTGAAAGCCTTTTGGCAGGAAAACGGCTTCGACATCAAATCCGAAGAAC CCGCCATCGGACAAATGGAAACCGAGTGGGCGGAAAACCGTGCCAAAATCCCCCAAGACAGCTTGCGCCGCCTATTCGAC ACAGTCGGTTTGGGCGGCATCTACTCCACCGGCGAGCGCGACAAATTCATCGTCCGTATCGAACAGGGCAAAAACGGCGT TTCCGACATCTTCTTCGCCCACAAAGCCATGAAAGAAGTGTACGGCGGCAAAGACAAAGACACGACCGTATGGCAGCCCT CCCCGTCCGATCCCAACCTCGAAGCCGCTTTCCTGACGCGCTTTATGCAATATTTGGGCGTTGACGGACAGCAGGCGGAA AACGCATCGGCAAAAAACCCGACCCTGCCCGCCGCCAACGAAATGGCGCGTATCGAAGGCAAAAGCCTGATTGTCTTTGG CGACTACGGCAGAAACTGGCGGCGCACCGCGCTCGCCCTCGACCGCATCGGGCTGACCGTCGTCGGTCAAAACACCGAAC GCCACGCTTTCCTGGTTCAAAAAGCCCCGAACGAAAGCAATGCAGTTACCGAACAAAAACCCGGCCTGTTCAAACGCCTG CTGGGCAAAGGCAAAGCGGAGAAACCTGCCGAACAGCCGGAACTGATTGTCTATGCCGAGCCTGTCGCCAACGGCTCGCG CATCGTCCTGCTCAACAAAGACGGCAGCGCATATGCCGGCAAAGACGCATCCGCATTATTGGGCAAACTCCATTCCGAAC TGCGTTAA
Upstream 100 bases:
>100_bases TGAAAGCCTCAGGACAACTTTAAATATAGCCATGCCGTCTGAAGCGTTCAGACGGCATAACGCAACAAACACTTTAATAT CCATCACACAGGATGACACG
Downstream 100 bases:
>100_bases ACCATTCAAAACAAAAGCAGCTTCCAAACAGAAGCTGCTTTTTTATGCGGAACTTTTTACAACAAACGGGGCAAAATATC CTCAACCGCCTGAACCAGCG
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MTHIKPVIAALALIGLAACSGSKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQQ PADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKAFWQENGFDIKSEEPAIGQMETEWAENRAKIPQDSLRRLFD TVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHKAMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAE NASAKNPTLPAANEMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQKAPNESNAVTEQKPGLFKRL LGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGKLHSELR
Sequences:
>Translated_375_residues MTHIKPVIAALALIGLAACSGSKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQQ PADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKAFWQENGFDIKSEEPAIGQMETEWAENRAKIPQDSLRRLFD TVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHKAMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAE NASAKNPTLPAANEMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQKAPNESNAVTEQKPGLFKRL LGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGKLHSELR >Mature_374_residues THIKPVIAALALIGLAACSGSKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQQP ADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKAFWQENGFDIKSEEPAIGQMETEWAENRAKIPQDSLRRLFDT VGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHKAMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAEN ASAKNPTLPAANEMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQKAPNESNAVTEQKPGLFKRLL GKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGKLHSELR
Specific function: Unknown
COG id: COG3317
COG function: function code M; Uncharacterized lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41218; Mature: 41087
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHIKPVIAALALIGLAACSGSKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECC GSGAVRASDLEKRRTPAVQQPADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKA CCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHCCEEECCCCCEEEEEECCCCHHHHHHHHH FWQENGFDIKSEEPAIGQMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRI HHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEE EQGKNGVSDIFFAHKAMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAE ECCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCC NASAKNPTLPAANEMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQ CCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCEEEEEE KAPNESNAVTEQKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAG ECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCC KDASALLGKLHSELR CCHHHHHHHHHHHCC >Mature Secondary Structure THIKPVIAALALIGLAACSGSKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECC GSGAVRASDLEKRRTPAVQQPADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKA CCCCEEHHHHHHHCCCCCCCCCCHHHHHHHHCCEEECCCCCEEEEEECCCCHHHHHHHHH FWQENGFDIKSEEPAIGQMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRI HHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEE EQGKNGVSDIFFAHKAMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAE ECCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCC NASAKNPTLPAANEMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQ CCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCEEEEEE KAPNESNAVTEQKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAG ECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCC KDASALLGKLHSELR CCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]