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The map label for this gene is 161869837

Identifier: 161869837

GI number: 161869837

Start: 870462

End: 871151

Strand: Reverse

Name: 161869837

Synonym: NMCC_0868

Alternate gene names: NA

Gene position: 871151-870462 (Counterclockwise)

Preceding gene: 161869840

Following gene: 161869835

Centisome position: 40.45

GC content: 49.42

Gene sequence:

>690_bases
GTGCAGGCGGATTTAGCTTATGCCGCCGAACGCATTACCCACGATTATCCGAAACCAACCGGTACAGACAAAGACAAAAT
AAGCACGGTAAGCGATTATTTCAGAAACATCCGTGCGCATTCCATCCACCCTCGTGTGTCGGTCGGCTACGATTTCGGCG
GCTGGAGGATAGCGGCAGATTATGCCAGTTACAGAAAATGGAACAACAATAAATATTCCGTCAACACAAAAAATGTGCAA
AAAAACGACAATGGCAACAGGCAAGACCTGAAGACGGAAAATCAGGAAAACGGTACATTCCACGCCGTTTCTTCTCTCGG
CTTATCCGCCATTTACGATTTCAAACTCAACGATAAATTCGATAAATTCAAACCCTATATCGGTGTGCGCGTCGCCTACG
GACACGTCAGACACAGCATCGATTCGACCAAAAAAACAACAAATGTTGTTACCGTCGCCGGTGCTGCTAACACAGCACCT
ACGATTTATTATGCACCAGAGACGCAAAACGCCTATCACGAAAGCCACAGCATCCGCCGCTTGGGTCTTGGTGTCATCGC
CGGTGTCGGTTTCGACATCACGCCCAAGCTGACCCTGGACACCGGATACCGTTACCACAACTGGGGACGCTTGGAAAACA
CCCGCTTCAAAACCCACGAAGTCTCATTGGGCGTGCGCTACCGCTTCTGA

Upstream 100 bases:

>100_bases
CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCCGCAGCGCAGGCGGCAAGTGAAGACG
GCAGCCGCAGCCCGTATTAT

Downstream 100 bases:

>100_bases
TTCCCCGACACCGATGCCGTCTGAACCTTCAGACGGCATTTTTGATGCACCTGCCGTTGACAGGCGCGGGGCGGGCGTAG
GGAAATGCCCGAACCGTCAT

Product: opacity protein

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MQADLAYAAERITHDYPKPTGTDKDKISTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAADYASYRKWNNNKYSVNTKNVQ
KNDNGNRQDLKTENQENGTFHAVSSLGLSAIYDFKLNDKFDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAP
TIYYAPETQNAYHESHSIRRLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGVRYRF

Sequences:

>Translated_229_residues
MQADLAYAAERITHDYPKPTGTDKDKISTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAADYASYRKWNNNKYSVNTKNVQ
KNDNGNRQDLKTENQENGTFHAVSSLGLSAIYDFKLNDKFDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAP
TIYYAPETQNAYHESHSIRRLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGVRYRF
>Mature_229_residues
MQADLAYAAERITHDYPKPTGTDKDKISTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAADYASYRKWNNNKYSVNTKNVQ
KNDNGNRQDLKTENQENGTFHAVSSLGLSAIYDFKLNDKFDKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAP
TIYYAPETQNAYHESHSIRRLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGVRYRF

Specific function: Implicated in a number of adherence functions. OPA proteins are implicated in pathogenesis and are subject to phase variation [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opacity porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR003394 [H]

Pfam domain/function: PF02462 Opacity [H]

EC number: NA

Molecular weight: Translated: 26033; Mature: 26033

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQADLAYAAERITHDYPKPTGTDKDKISTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAAD
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEC
YASYRKWNNNKYSVNTKNVQKNDNGNRQDLKTENQENGTFHAVSSLGLSAIYDFKLNDKF
HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCEEEEEEEECCCH
DKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIRR
HHHCCEEEEEEEEHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHH
LGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGVRYRF
HHHHEEECCCCCCCCEEEECCCCEECCCCCCCCCEEEEEEEEEEEEECC
>Mature Secondary Structure
MQADLAYAAERITHDYPKPTGTDKDKISTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAAD
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEC
YASYRKWNNNKYSVNTKNVQKNDNGNRQDLKTENQENGTFHAVSSLGLSAIYDFKLNDKF
HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCEEEEEEEECCCH
DKFKPYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIRR
HHHCCEEEEEEEEHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHH
LGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGVRYRF
HHHHEEECCCCCCCCEEEECCCCEECCCCCCCCCEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3093085 [H]