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The map label for this gene is yebA [H]

Identifier: 161524791

GI number: 161524791

Start: 1789775

End: 1791013

Strand: Direct

Name: yebA [H]

Synonym: Bmul_1618

Alternate gene names: 161524791

Gene position: 1789775-1791013 (Clockwise)

Preceding gene: 161524790

Following gene: 161524810

Centisome position: 51.9

GC content: 71.11

Gene sequence:

>1239_bases
TTGGTCAAGTTAGCCGCAACTCGTGATGCCTCCGCGCCGGGCCGCGCGCAGCGCTTCGTGCGCGCGCTGGTGCCCGCCGC
GGTGCTCGGCGCGCTCGCCGCGCTCGGGCTGGCCGCCGCGCTGCCGGCCGTCTCGCAACGGCCCGGCCCCGTCGACGCCG
ACACGGTCGTGCTGCCGCAGCGCGTGCTGTCCGACACGCCGTTTCCCACCGCACAACATTTCGTGACGAGCGAACTCGCC
CGCACGATCGGCGAGCGCAACGCGCAGCCCGGCCTGTTCGCGCCGCTCAGCGCGCACCGCAACGACATGCTGGGCTACGC
GAACCTGTTTACGCTCGCGCCGCCCGAGCCGCTGCACGGCATGCGCGCGGGCACGATCGAGCTCTCGCTCGCCGACACGC
TGAACCGCATCGACGTGCCGCCCGAAGTCCGGATCCAGCTCGGCGATCTCGTCAGCGGCAAGGTCGCGATGCACGCGAGC
GCGAAGCGCGGCGACTATTACCGCGTCGCGTTCGATACGCGCGGCGAAGCGCCGCGGCTCACCGCGCTCGAGCTGCGCGT
CGCGGGCCGCACGTTCGGCGCGATCTGGTTCCGCGCGCCGGGCGCCGAGCACGGCGCGTACTACACGCTCGACGGCGCGC
CGCTCGAAGCGGCCGCGTTCACGATGCCGGTGAAGTGGACGCGCATCAGCTCGTTCTTCGGCGAGCGCATTCATCCGCTG
TCGCAGGCGATGGCGTTCCATACGGGCGTCGACCTCGCCGCGCCGTCCGGCACGCCGGTCGCGGCCGCCGCCGACGGCGT
CGTGTCGTTCGTCGGCACCGATCCGGGCGGCTACGGTCATTACGTGATCGTCGATCATGCCGACGGCTATTCGACGTACT
ACGCGCACCTGTCCGCGTTCGCGCGCGGGCTCAAGGTCGGCGAAGTCGTCAAGCAGGGCCAGCGCATCGGCTCGGTCGGC
ATGACCGGCGCGGCGACAGGTCCGCACCTGCATTTCGAGGTGCGCGTCGCGAACGAGCCGGTCGATCCGCTCGTCACGCT
CGCGAGCGCGCAGACGGCGCTATCGGACATGCAGCTGACCGCGTTCCGGCAGGAAGCCGCCGAATGGCGTTTCCGTCTCG
CATCGATCAGCACCGCGCCGTTCGCGTTCGTGCAGAACGACGGCCCGCTGTGGGGCGACTTCGCGATCGACAAATCGACG
CTGCGCGCCGTGTTCGACACGCACTACGCGGCGTCCTGA

Upstream 100 bases:

>100_bases
TTTTGTTGCACGCCCGCCGCCCGCCCCGTCGCCGTTCGACGGATGAGCCGCCGGCGGTCCCGCCCACACCCCCGTGAACC
GCTTTTCTGGATGTGGACCC

Downstream 100 bases:

>100_bases
TCGGCCGCGATACGCGGCGCGCGCGGCGTGCACGCCGCGGTGTCGCATGCGCGGCGCCGCTCGCGCGGGCCGCGTGACAG
CAACCAGCGCGCGGCGCCGT

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MVKLAATRDASAPGRAQRFVRALVPAAVLGALAALGLAAALPAVSQRPGPVDADTVVLPQRVLSDTPFPTAQHFVTSELA
RTIGERNAQPGLFAPLSAHRNDMLGYANLFTLAPPEPLHGMRAGTIELSLADTLNRIDVPPEVRIQLGDLVSGKVAMHAS
AKRGDYYRVAFDTRGEAPRLTALELRVAGRTFGAIWFRAPGAEHGAYYTLDGAPLEAAAFTMPVKWTRISSFFGERIHPL
SQAMAFHTGVDLAAPSGTPVAAAADGVVSFVGTDPGGYGHYVIVDHADGYSTYYAHLSAFARGLKVGEVVKQGQRIGSVG
MTGAATGPHLHFEVRVANEPVDPLVTLASAQTALSDMQLTAFRQEAAEWRFRLASISTAPFAFVQNDGPLWGDFAIDKST
LRAVFDTHYAAS

Sequences:

>Translated_412_residues
MVKLAATRDASAPGRAQRFVRALVPAAVLGALAALGLAAALPAVSQRPGPVDADTVVLPQRVLSDTPFPTAQHFVTSELA
RTIGERNAQPGLFAPLSAHRNDMLGYANLFTLAPPEPLHGMRAGTIELSLADTLNRIDVPPEVRIQLGDLVSGKVAMHAS
AKRGDYYRVAFDTRGEAPRLTALELRVAGRTFGAIWFRAPGAEHGAYYTLDGAPLEAAAFTMPVKWTRISSFFGERIHPL
SQAMAFHTGVDLAAPSGTPVAAAADGVVSFVGTDPGGYGHYVIVDHADGYSTYYAHLSAFARGLKVGEVVKQGQRIGSVG
MTGAATGPHLHFEVRVANEPVDPLVTLASAQTALSDMQLTAFRQEAAEWRFRLASISTAPFAFVQNDGPLWGDFAIDKST
LRAVFDTHYAAS
>Mature_412_residues
MVKLAATRDASAPGRAQRFVRALVPAAVLGALAALGLAAALPAVSQRPGPVDADTVVLPQRVLSDTPFPTAQHFVTSELA
RTIGERNAQPGLFAPLSAHRNDMLGYANLFTLAPPEPLHGMRAGTIELSLADTLNRIDVPPEVRIQLGDLVSGKVAMHAS
AKRGDYYRVAFDTRGEAPRLTALELRVAGRTFGAIWFRAPGAEHGAYYTLDGAPLEAAAFTMPVKWTRISSFFGERIHPL
SQAMAFHTGVDLAAPSGTPVAAAADGVVSFVGTDPGGYGHYVIVDHADGYSTYYAHLSAFARGLKVGEVVKQGQRIGSVG
MTGAATGPHLHFEVRVANEPVDPLVTLASAQTALSDMQLTAFRQEAAEWRFRLASISTAPFAFVQNDGPLWGDFAIDKST
LRAVFDTHYAAS

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=190, Percent_Identity=38.4210526315789, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI87082174, Length=111, Percent_Identity=39.6396396396396, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1789099, Length=111, Percent_Identity=34.2342342342342, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 43738; Mature: 43738

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLAATRDASAPGRAQRFVRALVPAAVLGALAALGLAAALPAVSQRPGPVDADTVVLPQ
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEECCH
RVLSDTPFPTAQHFVTSELARTIGERNAQPGLFAPLSAHRNDMLGYANLFTLAPPEPLHG
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCHHHCCCCCCCHHEEEECCCCCCCCC
MRAGTIELSLADTLNRIDVPPEVRIQLGDLVSGKVAMHASAKRGDYYRVAFDTRGEAPRL
CCCCEEEEEHHHHHHHCCCCCHHEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCCCCE
TALELRVAGRTFGAIWFRAPGAEHGAYYTLDGAPLEAAAFTMPVKWTRISSFFGERIHPL
EEEEEEECCCEEEEEEEECCCCCCCCEEEECCCCCCHHEEEECEEHHHHHHHHHHHHHHH
SQAMAFHTGVDLAAPSGTPVAAAADGVVSFVGTDPGGYGHYVIVDHADGYSTYYAHLSAF
HHHHHHHCCCCEECCCCCCCEEECCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHH
ARGLKVGEVVKQGQRIGSVGMTGAATGPHLHFEVRVANEPVDPLVTLASAQTALSDMQLT
HHCCHHHHHHHHCHHCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
AFRQEAAEWRFRLASISTAPFAFVQNDGPLWGDFAIDKSTLRAVFDTHYAAS
HHHHHHHHHHEEHEECCCCCEEEEECCCCEECCEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKLAATRDASAPGRAQRFVRALVPAAVLGALAALGLAAALPAVSQRPGPVDADTVVLPQ
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEECCH
RVLSDTPFPTAQHFVTSELARTIGERNAQPGLFAPLSAHRNDMLGYANLFTLAPPEPLHG
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCHHHCCCCCCCHHEEEECCCCCCCCC
MRAGTIELSLADTLNRIDVPPEVRIQLGDLVSGKVAMHASAKRGDYYRVAFDTRGEAPRL
CCCCEEEEEHHHHHHHCCCCCHHEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCCCCE
TALELRVAGRTFGAIWFRAPGAEHGAYYTLDGAPLEAAAFTMPVKWTRISSFFGERIHPL
EEEEEEECCCEEEEEEEECCCCCCCCEEEECCCCCCHHEEEECEEHHHHHHHHHHHHHHH
SQAMAFHTGVDLAAPSGTPVAAAADGVVSFVGTDPGGYGHYVIVDHADGYSTYYAHLSAF
HHHHHHHCCCCEECCCCCCCEEECCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHH
ARGLKVGEVVKQGQRIGSVGMTGAATGPHLHFEVRVANEPVDPLVTLASAQTALSDMQLT
HHCCHHHHHHHHCHHCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
AFRQEAAEWRFRLASISTAPFAFVQNDGPLWGDFAIDKSTLRAVFDTHYAAS
HHHHHHHHHHEEHEECCCCCEEEEECCCCEECCEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]