| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is phbC [H]
Identifier: 161524656
GI number: 161524656
Start: 1633845
End: 1635710
Strand: Direct
Name: phbC [H]
Synonym: Bmul_1483
Alternate gene names: 161524656
Gene position: 1633845-1635710 (Clockwise)
Preceding gene: 161524655
Following gene: 161524657
Centisome position: 47.38
GC content: 65.59
Gene sequence:
>1866_bases ATGACAGCATCGAAAAATTCGTCGACGTCCGCTGCGGCGGGCACTTCCGCGGGCAATACGGGATTCGGTTCCGCCGCGCA GCCGATGCAGCAGATGTTCGAAGCTTGGCTGAATGCATGGCGCGATTTTGCCGATCCGGCGCGTGCCGCGACTGCGTCGC CCGCCGTCAATCCGTTCGCTTCGTTCCAGTTTCCGAAGTCGTTCCCGTTCCAGATGCCGTCGATGCCCGATTTCGGCGCG ATGGCGTCGCCGTTCGCGGGGCTCACGCTGCCGGTCGCGGCGATTCCGCCCGAGCGCCTGCAGAAGCTGCAGGCCGACTA TGCGCGCGACTGCGTCGCGCTGATGCAGCAGGCGGCCGCAGCGAAGCTCGAGGCTCCCGAGCTGAAGGATCGGCGCTTCA GCGGCGACGCATGGAAGGCATCGCCGGCCCATGCATTCGCGGCCGCGTGGTATCTGCTCAATGCACGTTATCTGCAGGAA CTCGCCGACGCGCTCGAGACCGATCCGAAAACGCGCGAGCGCATCCGTTTCGCCGTGCAGCAGTGGACGGCCGCCGCCGC GCCGAGCAACTTCCTCGCGCTGAATCCCGATGCGCAGAAGTCGATTCTCGAAACGCAGGGCGAAAGCCTGCGGCAGGGGA TGATGAACCTGCTGGGCGATCTGCAGCGCGGCAAGATTTCGCAGACCGACGAATCGCAGTTCGTCGTCGGCAAGAACCTC GGGTGCACGGAAGGCGCGGTCGTCTACGAGAACGACCTGATCCAGCTGATCCAGTACACGCCGAAGACCGCGAAGGTGTT CGAGCGGCCGCTGCTGATCGTGCCGCCGTGTATCAACAAGTTCTACATCCTCGATCTGCAGCCCGAGAACTCGCTCGTCG CGCACGCGGTATCGAGCGGCCATCAGGTGTTTCTCGTGTCGTGGCGCAATGCCGATGCGTCGGTCGCGCACAAGACGTGG GACGACTACATGAACGAAGGGCTGCTCGCCGCGATCGACGCCGTGCAGCAGGTGAGCGGGCGCGAACAGATCAATACGCT CGGCTTCTGCGTCGGCGGCACGATGCTCGCGACCGCGCTCGCGGTGCTCGCCGCGCGCGGCGAACATCCGGCCGCGTCGA TGACGCTGCTTACCGCGATGCTCGACTTCTCCGATACGGGCGTGCTCGACGTGTTCGTCGACGAGGCGCACGTGCAGATG CGCGAGCAGACGATCGGCGGCAAGAACGGGACGCCGCCCGGGTTGATGCGCGGCGTCGAGTTCGCGAACACGTTCTCGTT CCTGCGCCCGAACGATCTCGTCTGGAACTACGTCGTCGACAACTACCTGAAGGGCCGCACGCCCGCGCCGTTCGACCTGC TGTACTGGAACAGCGATTCGACGAGCCTGCCGGGGCCGATGTACGCGTGGTACCTGCGCAATACGTATCTCGAGAACAAG CTGCGCGAGCCGGGCGCGCTGACCGTCTGCGGCGAGCCGGTCGATCTGTCGCGCATCGACGTGCCGACCTTCATCTACGG GTCGCGCGAGGATCACATCGTGCCGTGGCAGACGGCCTATGCGTCGACATCGATCCTGACGGGCCCGCTGAAGTTCGTGC TCGGCGCCTCGGGCCACATCGCCGGCGTGATCAATCCACCCGCGAAGAAAAAGCGCAGCTACTGGGTCAACGACGACGAC CTGCCGAGCGCCGCCGACGACTGGTTCGCCGGCGCGACCGAGCATCCGGGCAGCTGGTGGACGACCTGGATCGAATGGCT CGACCAGTACGGCGGCCGCAAGGTGGCGGCGCCAGCCGAGCTCGGCTCCGCGCAATTCCCGGTGATCGAACCGGCACCCG GCCGTTACGTATTGCAGCGCGATTGA
Upstream 100 bases:
>100_bases AGACGCCTCTCCAGGGCATGACGGCCCGGCTCGCAGCCGGCATGCCGCGCGCGAGCAGGATTTCGCGATTGACGCTCACG AATCACCGGTAAGGCAGGTA
Downstream 100 bases:
>100_bases CGAAAGCCGGACAGCGGCGCACGCTGTCCGACTGCACCGCAGTTTTTTTAACAGGGTCGGCAGCGACGCGCCGTGTCGCG CGGGCTCGGAGGAATGGAAA
Product: poly(R)-hydroxyalkanoic acid synthase, class I
Products: NA
Alternate protein names: PHA synthase; PHB synthase; Poly(3-hydroxyalkanoate) polymerase; PHA polymerase; Poly(3-hydroxybutyrate) polymerase; PHB polymerase; Polyhydroxyalkanoic acid synthase [H]
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MTASKNSSTSAAAGTSAGNTGFGSAAQPMQQMFEAWLNAWRDFADPARAATASPAVNPFASFQFPKSFPFQMPSMPDFGA MASPFAGLTLPVAAIPPERLQKLQADYARDCVALMQQAAAAKLEAPELKDRRFSGDAWKASPAHAFAAAWYLLNARYLQE LADALETDPKTRERIRFAVQQWTAAAAPSNFLALNPDAQKSILETQGESLRQGMMNLLGDLQRGKISQTDESQFVVGKNL GCTEGAVVYENDLIQLIQYTPKTAKVFERPLLIVPPCINKFYILDLQPENSLVAHAVSSGHQVFLVSWRNADASVAHKTW DDYMNEGLLAAIDAVQQVSGREQINTLGFCVGGTMLATALAVLAARGEHPAASMTLLTAMLDFSDTGVLDVFVDEAHVQM REQTIGGKNGTPPGLMRGVEFANTFSFLRPNDLVWNYVVDNYLKGRTPAPFDLLYWNSDSTSLPGPMYAWYLRNTYLENK LREPGALTVCGEPVDLSRIDVPTFIYGSREDHIVPWQTAYASTSILTGPLKFVLGASGHIAGVINPPAKKKRSYWVNDDD LPSAADDWFAGATEHPGSWWTTWIEWLDQYGGRKVAAPAELGSAQFPVIEPAPGRYVLQRD
Sequences:
>Translated_621_residues MTASKNSSTSAAAGTSAGNTGFGSAAQPMQQMFEAWLNAWRDFADPARAATASPAVNPFASFQFPKSFPFQMPSMPDFGA MASPFAGLTLPVAAIPPERLQKLQADYARDCVALMQQAAAAKLEAPELKDRRFSGDAWKASPAHAFAAAWYLLNARYLQE LADALETDPKTRERIRFAVQQWTAAAAPSNFLALNPDAQKSILETQGESLRQGMMNLLGDLQRGKISQTDESQFVVGKNL GCTEGAVVYENDLIQLIQYTPKTAKVFERPLLIVPPCINKFYILDLQPENSLVAHAVSSGHQVFLVSWRNADASVAHKTW DDYMNEGLLAAIDAVQQVSGREQINTLGFCVGGTMLATALAVLAARGEHPAASMTLLTAMLDFSDTGVLDVFVDEAHVQM REQTIGGKNGTPPGLMRGVEFANTFSFLRPNDLVWNYVVDNYLKGRTPAPFDLLYWNSDSTSLPGPMYAWYLRNTYLENK LREPGALTVCGEPVDLSRIDVPTFIYGSREDHIVPWQTAYASTSILTGPLKFVLGASGHIAGVINPPAKKKRSYWVNDDD LPSAADDWFAGATEHPGSWWTTWIEWLDQYGGRKVAAPAELGSAQFPVIEPAPGRYVLQRD >Mature_620_residues TASKNSSTSAAAGTSAGNTGFGSAAQPMQQMFEAWLNAWRDFADPARAATASPAVNPFASFQFPKSFPFQMPSMPDFGAM ASPFAGLTLPVAAIPPERLQKLQADYARDCVALMQQAAAAKLEAPELKDRRFSGDAWKASPAHAFAAAWYLLNARYLQEL ADALETDPKTRERIRFAVQQWTAAAAPSNFLALNPDAQKSILETQGESLRQGMMNLLGDLQRGKISQTDESQFVVGKNLG CTEGAVVYENDLIQLIQYTPKTAKVFERPLLIVPPCINKFYILDLQPENSLVAHAVSSGHQVFLVSWRNADASVAHKTWD DYMNEGLLAAIDAVQQVSGREQINTLGFCVGGTMLATALAVLAARGEHPAASMTLLTAMLDFSDTGVLDVFVDEAHVQMR EQTIGGKNGTPPGLMRGVEFANTFSFLRPNDLVWNYVVDNYLKGRTPAPFDLLYWNSDSTSLPGPMYAWYLRNTYLENKL REPGALTVCGEPVDLSRIDVPTFIYGSREDHIVPWQTAYASTSILTGPLKFVLGASGHIAGVINPPAKKKRSYWVNDDDL PSAADDWFAGATEHPGSWWTTWIEWLDQYGGRKVAAPAELGSAQFPVIEPAPGRYVLQRD
Specific function: Polymerizes d(-)-3-hydroxybutyryl-CoA to create PHB which consists of thousands of hydroxybutyrate molecules linked end to end. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation [H]
COG id: COG3243
COG function: function code I; Poly(3-hydroxyalkanoate) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PHA/PHB synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR010963 - InterPro: IPR010941 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF07167 PhaC_N [H]
EC number: NA
Molecular weight: Translated: 67915; Mature: 67784
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASKNSSTSAAAGTSAGNTGFGSAAQPMQQMFEAWLNAWRDFADPARAATASPAVNPFA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHH SFQFPKSFPFQMPSMPDFGAMASPFAGLTLPVAAIPPERLQKLQADYARDCVALMQQAAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH AKLEAPELKDRRFSGDAWKASPAHAFAAAWYLLNARYLQELADALETDPKTRERIRFAVQ HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QWTAAAAPSNFLALNPDAQKSILETQGESLRQGMMNLLGDLQRGKISQTDESQFVVGKNL HHHHHCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC GCTEGAVVYENDLIQLIQYTPKTAKVFERPLLIVPPCINKFYILDLQPENSLVAHAVSSG CCCCCCEEEHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCEEEEEECCCCCHHHHHHCCC HQVFLVSWRNADASVAHKTWDDYMNEGLLAAIDAVQQVSGREQINTLGFCVGGTMLATAL CEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AVLAARGEHPAASMTLLTAMLDFSDTGVLDVFVDEAHVQMREQTIGGKNGTPPGLMRGVE HHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHH FANTFSFLRPNDLVWNYVVDNYLKGRTPAPFDLLYWNSDSTSLPGPMYAWYLRNTYLENK HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH LREPGALTVCGEPVDLSRIDVPTFIYGSREDHIVPWQTAYASTSILTGPLKFVLGASGHI CCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCE AGVINPPAKKKRSYWVNDDDLPSAADDWFAGATEHPGSWWTTWIEWLDQYGGRKVAAPAE EEEECCCHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCEEECCCHH LGSAQFPVIEPAPGRYVLQRD CCCCCCCEECCCCCCEEEECC >Mature Secondary Structure TASKNSSTSAAAGTSAGNTGFGSAAQPMQQMFEAWLNAWRDFADPARAATASPAVNPFA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHH SFQFPKSFPFQMPSMPDFGAMASPFAGLTLPVAAIPPERLQKLQADYARDCVALMQQAAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH AKLEAPELKDRRFSGDAWKASPAHAFAAAWYLLNARYLQELADALETDPKTRERIRFAVQ HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH QWTAAAAPSNFLALNPDAQKSILETQGESLRQGMMNLLGDLQRGKISQTDESQFVVGKNL HHHHHCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC GCTEGAVVYENDLIQLIQYTPKTAKVFERPLLIVPPCINKFYILDLQPENSLVAHAVSSG CCCCCCEEEHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCEEEEEECCCCCHHHHHHCCC HQVFLVSWRNADASVAHKTWDDYMNEGLLAAIDAVQQVSGREQINTLGFCVGGTMLATAL CEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AVLAARGEHPAASMTLLTAMLDFSDTGVLDVFVDEAHVQMREQTIGGKNGTPPGLMRGVE HHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHH FANTFSFLRPNDLVWNYVVDNYLKGRTPAPFDLLYWNSDSTSLPGPMYAWYLRNTYLENK HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHH LREPGALTVCGEPVDLSRIDVPTFIYGSREDHIVPWQTAYASTSILTGPLKFVLGASGHI CCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCE AGVINPPAKKKRSYWVNDDDLPSAADDWFAGATEHPGSWWTTWIEWLDQYGGRKVAAPAE EEEECCCHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCEEECCCHH LGSAQFPVIEPAPGRYVLQRD CCCCCCCEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2670936; 1987116 [H]