Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
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Accession | NC_010084 |
Length | 3,448,466 |
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The map label for this gene is yfiH [H]
Identifier: 161524655
GI number: 161524655
Start: 1632648
End: 1633487
Strand: Direct
Name: yfiH [H]
Synonym: Bmul_1482
Alternate gene names: 161524655
Gene position: 1632648-1633487 (Clockwise)
Preceding gene: 161524654
Following gene: 161524656
Centisome position: 47.34
GC content: 73.93
Gene sequence:
>840_bases ATGACGAACCCCACGCCGCTGAGCTGGCGGGATTGCGTGCTGCCGGACTGGCAGGTGTCGCCGCGCGTGCGCGCGTTGAT CACGACGCGCGACGGCGGCGTCAGCGAAGGGCCGTACGGCCGCTGGCAGGACGGCGCCGCGCTGCCGGGCGGCATGAATC TCGGCCTGCATACGGGCGACGATCCCGCGCATGTCGCACAGAACCGCGCGCGACTGCTCGCGCTGACCGGGCAGCCGCGC GCCGCGTGGCTCGAGCAGGTGCACGGCGCGCAGATCGTGCGCGCGGACGAAGTGATCGCGTCGGCCGGCGACGGCGCGAC GCCGGTGCAGGCCGACGCGAGCGTCACCGATCGCGCGGGCGCCGTGTGCGTCGTGATGGTGGCCGACTGCCTGCCCGTGT TGCTGTGCGATGCGCAGGGCCGCGCGGTGGGCGCCGCCCATGCGGGCTGGCGCGGGCTCGCGGCCGGCATCGTCGAGCAG ACGGCCGCGCGCGTCGCGGCGCTGGCCGGCGGCGCGGCGGCCGACGTCCATGCGTTTCTCGGCCCGGCGATCGGGCCGCG CGCGTTCGAAGTCGGTGCGGACGTGCGCGACGCGTTTCTCGACACGGCCACGCAGTCGGAGCATGATGAAACCCGTCGTG CGTTCGTCGCGATCGACGGCGCGCCGGGCAAGTATCTGGCCGATCTGTATGCGCTTGCGCGCGTGCGTGTCGCGCGGGCC GGCGTCGTGCACGTGAGCGGCGGCGATGCATGCACGCTCACCGAGCGCGCGCGTTTCTATTCGTATCGCCGCGACCGCGT GACGGGCAGGATGGCCGCGGCGATCTGGCTGGCCGATTGA
Upstream 100 bases:
>100_bases ACGACGAGGAATTCGACGACGACGGCATCGACGACGACGATTTCGGCGGCGATTATCACGACGATGCGTCCTATCCGGAC GACGAGAGGGAGTAAGGCCG
Downstream 100 bases:
>100_bases CCGATGCGTGCGCAGCTGGTTTGCTGCGCCGCGCAATCGATTTATCTCGATATTGATGCGGCAATGGTGGGCAGTATGCT TGACCGATTGAAAAATCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTNPTPLSWRDCVLPDWQVSPRVRALITTRDGGVSEGPYGRWQDGAALPGGMNLGLHTGDDPAHVAQNRARLLALTGQPR AAWLEQVHGAQIVRADEVIASAGDGATPVQADASVTDRAGAVCVVMVADCLPVLLCDAQGRAVGAAHAGWRGLAAGIVEQ TAARVAALAGGAAADVHAFLGPAIGPRAFEVGADVRDAFLDTATQSEHDETRRAFVAIDGAPGKYLADLYALARVRVARA GVVHVSGGDACTLTERARFYSYRRDRVTGRMAAAIWLAD
Sequences:
>Translated_279_residues MTNPTPLSWRDCVLPDWQVSPRVRALITTRDGGVSEGPYGRWQDGAALPGGMNLGLHTGDDPAHVAQNRARLLALTGQPR AAWLEQVHGAQIVRADEVIASAGDGATPVQADASVTDRAGAVCVVMVADCLPVLLCDAQGRAVGAAHAGWRGLAAGIVEQ TAARVAALAGGAAADVHAFLGPAIGPRAFEVGADVRDAFLDTATQSEHDETRRAFVAIDGAPGKYLADLYALARVRVARA GVVHVSGGDACTLTERARFYSYRRDRVTGRMAAAIWLAD >Mature_278_residues TNPTPLSWRDCVLPDWQVSPRVRALITTRDGGVSEGPYGRWQDGAALPGGMNLGLHTGDDPAHVAQNRARLLALTGQPRA AWLEQVHGAQIVRADEVIASAGDGATPVQADASVTDRAGAVCVVMVADCLPVLLCDAQGRAVGAAHAGWRGLAAGIVEQT AARVAALAGGAAADVHAFLGPAIGPRAFEVGADVRDAFLDTATQSEHDETRRAFVAIDGAPGKYLADLYALARVRVARAG VVHVSGGDACTLTERARFYSYRRDRVTGRMAAAIWLAD
Specific function: Unknown
COG id: COG1496
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0124 family [H]
Homologues:
Organism=Homo sapiens, GI190194374, Length=164, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI190194372, Length=164, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1788945, Length=266, Percent_Identity=46.2406015037594, Blast_Score=217, Evalue=6e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003730 - InterPro: IPR011324 [H]
Pfam domain/function: PF02578 Cu-oxidase_4 [H]
EC number: NA
Molecular weight: Translated: 29148; Mature: 29017
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPTPLSWRDCVLPDWQVSPRVRALITTRDGGVSEGPYGRWQDGAALPGGMNLGLHTGD CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECEECCC DPAHVAQNRARLLALTGQPRAAWLEQVHGAQIVRADEVIASAGDGATPVQADASVTDRAG CHHHHHHCCEEEEEECCCCHHHHHHHHCCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCCC AVCVVMVADCLPVLLCDAQGRAVGAAHAGWRGLAAGIVEQTAARVAALAGGAAADVHAFL CEEEHHHHHHHHEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GPAIGPRAFEVGADVRDAFLDTATQSEHDETRRAFVAIDGAPGKYLADLYALARVRVARA CCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC GVVHVSGGDACTLTERARFYSYRRDRVTGRMAAAIWLAD CEEEECCCCEEEHHHHHHHHHHHHHHHHCEEEEEEEECC >Mature Secondary Structure TNPTPLSWRDCVLPDWQVSPRVRALITTRDGGVSEGPYGRWQDGAALPGGMNLGLHTGD CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECEECCC DPAHVAQNRARLLALTGQPRAAWLEQVHGAQIVRADEVIASAGDGATPVQADASVTDRAG CHHHHHHCCEEEEEECCCCHHHHHHHHCCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCCC AVCVVMVADCLPVLLCDAQGRAVGAAHAGWRGLAAGIVEQTAARVAALAGGAAADVHAFL CEEEHHHHHHHHEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GPAIGPRAFEVGADVRDAFLDTATQSEHDETRRAFVAIDGAPGKYLADLYALARVRVARA CCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC GVVHVSGGDACTLTERARFYSYRRDRVTGRMAAAIWLAD CEEEECCCCEEEHHHHHHHHHHHHHHHHCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1906060; 9205837; 9278503; 2066329 [H]