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The map label for this gene is ydfM [H]

Identifier: 160902489

GI number: 160902489

Start: 1092827

End: 1093798

Strand: Direct

Name: ydfM [H]

Synonym: Pmob_1026

Alternate gene names: 160902489

Gene position: 1092827-1093798 (Clockwise)

Preceding gene: 160902486

Following gene: 160902490

Centisome position: 50.37

GC content: 32.3

Gene sequence:

>972_bases
TTGAAGAAAACACTAAATGAAGAAAATTTTCAGATTAATTCAACAAGAGAAAAATTAGCCGCAAATGCCTCCTGGATGGG
AATAATAATAAACGGTGCTCTTGCTTTTTTTAAATTAGTTATCTCTTTCATTACGGGGAGCATGGCGATTTTAGCTGATG
GAATAGATACTACAACGGATATAATAACTTCCATACTAACTTTAATTGCATCGAAAATTTCAAGTAAACCCGCAGATGAT
AGCCATCCTTTTGGCCATGAACGAGCTGAAACGATAGTTACTAAGGTTTTATCTTTAGTGATTATTTACGCCGGTTTTCA
AGTTCTCATAGGTGCCATTCAAAGTATAATAACCCATAGTTTTTCAATTTATAGGCCTTATTTAGTGCTATGGATTTCTT
TGATTTCGATATTTACCAAATATTTTTTATACAAATATAAATTCTCCGTCGGAAATAAAATAAGAAACTCTTCTATAGTG
GCGGATGCTTTAAATATGAGAAATGACATTTTAACTTCTTTGTCTGTATTAATTGGCATTATATTTTACCTTACGTTAAA
CATAATGTGGGTGGATTCGCTGGTGGCGATTATTGTATCCGCGTTCATATTCAGAGTTGGAATAAAGATGTTTCTAGAAA
CCTCAGATGAGTTTATGGGTAGTTCAAAAGAATTAGGAGAAATTTATTACAATACTTTAGAAGCCGTTGAAAAAGTTAGC
AAAGCCAATAATCCTCATAAAATCAGGGTGAGAAAAGCAGGATATGTTTATTTTGTCGAACTTCATATCGAAGTCGAAGA
AGAAATGAGCGTAAAAGAAGCTAATGAAACAGCGTCGCAAGTTGAAAAGGAATTAAAGAAAATAAATCCTTACATAAAAG
ATGTGATGATCCACGTAGAACCTTTAGGGAACAACGAGGAAGAAGAATTTGGATTCGATAAAAATTCTATTAAAAGAATT
TTTGATAAATAA

Upstream 100 bases:

>100_bases
TTCAAAGAATATTACTTGTGGTATAATAAGCAATGCACATAGGTGTATTGAATTTCAATTTTAGCTGACATTCACTGAAG
TCAACAAAGGAGAATACTAT

Downstream 100 bases:

>100_bases
GTGGAGGTGTAACGTTTTGATCGGTGATTTTGTAGATGAGGTGAACATCAAAGTGATTGCTGGAAAAGGAGGCGATGGAG
CTGTAAGCTTTAGAAGAGAA

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKKTLNEENFQINSTREKLAANASWMGIIINGALAFFKLVISFITGSMAILADGIDTTTDIITSILTLIASKISSKPADD
SHPFGHERAETIVTKVLSLVIIYAGFQVLIGAIQSIITHSFSIYRPYLVLWISLISIFTKYFLYKYKFSVGNKIRNSSIV
ADALNMRNDILTSLSVLIGIIFYLTLNIMWVDSLVAIIVSAFIFRVGIKMFLETSDEFMGSSKELGEIYYNTLEAVEKVS
KANNPHKIRVRKAGYVYFVELHIEVEEEMSVKEANETASQVEKELKKINPYIKDVMIHVEPLGNNEEEEFGFDKNSIKRI
FDK

Sequences:

>Translated_323_residues
MKKTLNEENFQINSTREKLAANASWMGIIINGALAFFKLVISFITGSMAILADGIDTTTDIITSILTLIASKISSKPADD
SHPFGHERAETIVTKVLSLVIIYAGFQVLIGAIQSIITHSFSIYRPYLVLWISLISIFTKYFLYKYKFSVGNKIRNSSIV
ADALNMRNDILTSLSVLIGIIFYLTLNIMWVDSLVAIIVSAFIFRVGIKMFLETSDEFMGSSKELGEIYYNTLEAVEKVS
KANNPHKIRVRKAGYVYFVELHIEVEEEMSVKEANETASQVEKELKKINPYIKDVMIHVEPLGNNEEEEFGFDKNSIKRI
FDK
>Mature_323_residues
MKKTLNEENFQINSTREKLAANASWMGIIINGALAFFKLVISFITGSMAILADGIDTTTDIITSILTLIASKISSKPADD
SHPFGHERAETIVTKVLSLVIIYAGFQVLIGAIQSIITHSFSIYRPYLVLWISLISIFTKYFLYKYKFSVGNKIRNSSIV
ADALNMRNDILTSLSVLIGIIFYLTLNIMWVDSLVAIIVSAFIFRVGIKMFLETSDEFMGSSKELGEIYYNTLEAVEKVS
KANNPHKIRVRKAGYVYFVELHIEVEEEMSVKEANETASQVEKELKKINPYIKDVMIHVEPLGNNEEEEFGFDKNSIKRI
FDK

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=276, Percent_Identity=25, Blast_Score=105, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI115533506, Length=303, Percent_Identity=22.4422442244224, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115533508, Length=303, Percent_Identity=22.4422442244224, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17508155, Length=269, Percent_Identity=23.7918215613383, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6325032, Length=240, Percent_Identity=25, Blast_Score=79, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6323831, Length=214, Percent_Identity=22.4299065420561, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 36497; Mature: 36497

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLNEENFQINSTREKLAANASWMGIIINGALAFFKLVISFITGSMAILADGIDTTTD
CCCCCCCCCCEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHH
IITSILTLIASKISSKPADDSHPFGHERAETIVTKVLSLVIIYAGFQVLIGAIQSIITHS
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSIYRPYLVLWISLISIFTKYFLYKYKFSVGNKIRNSSIVADALNMRNDILTSLSVLIGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH
IFYLTLNIMWVDSLVAIIVSAFIFRVGIKMFLETSDEFMGSSKELGEIYYNTLEAVEKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHH
KANNPHKIRVRKAGYVYFVELHIEVEEEMSVKEANETASQVEKELKKINPYIKDVMIHVE
HCCCCCEEEEEECCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEEE
PLGNNEEEEFGFDKNSIKRIFDK
ECCCCCHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MKKTLNEENFQINSTREKLAANASWMGIIINGALAFFKLVISFITGSMAILADGIDTTTD
CCCCCCCCCCEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHH
IITSILTLIASKISSKPADDSHPFGHERAETIVTKVLSLVIIYAGFQVLIGAIQSIITHS
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSIYRPYLVLWISLISIFTKYFLYKYKFSVGNKIRNSSIVADALNMRNDILTSLSVLIGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH
IFYLTLNIMWVDSLVAIIVSAFIFRVGIKMFLETSDEFMGSSKELGEIYYNTLEAVEKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHH
KANNPHKIRVRKAGYVYFVELHIEVEEEMSVKEANETASQVEKELKKINPYIKDVMIHVE
HCCCCCEEEEEECCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEEE
PLGNNEEEEFGFDKNSIKRIFDK
ECCCCCHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]