| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is ndvB [H]
Identifier: 160902417
GI number: 160902417
Start: 1011206
End: 1013566
Strand: Direct
Name: ndvB [H]
Synonym: Pmob_0953
Alternate gene names: 160902417
Gene position: 1011206-1013566 (Clockwise)
Preceding gene: 160902416
Following gene: 160902418
Centisome position: 46.61
GC content: 35.66
Gene sequence:
>2361_bases ATGTTCGAGACAAAATACGGGTATTTCACAGATGATGGAAAAGAATTCGTTATAACTACACCTAAAACTCCTAAACCTTG GATAAACGTTATTTCTAATGGAGATTATGGAATGATTATATCTCAAAGTGGTTCTGGTTATAGTTGGAGAACACATGCAA GTTTAAATAGAATTACACGGTGGGAACAAGATCTCATAAAGGATGAATGGGGCAAATATATATACATAAAAGATGAGACA AGAGGAGATTTTTGGTCTCCAAGTTGGAAGCCCACTTGTAAAGAACCACAAGAGTATGAAGCAAGACATGGCCAAGGTTA TTCAATATTTGAAACAAAATACTTCGATATAAAAACAAATTTAACTATGTTTGTATCTAAGGATGATCCAGTTGAAATAT GGAAGTTAACTATAAAAAATACTTCTGAAAAAGAACGAAAATTGTCTGTTTACACCTACTTAGAATGGAATTTAGGGGCT GCTCCCGACTGGCACAGAGAGTTTCACAAAACTTTTATAGAAACAGATTTTTTAAATGATTTAAACTGTATAACAGCTGA AAAAAGAATGTGGGAGATTCCAAATGAAAAAGGTCAACATTGGAACAGGAACTGGGAATATACCGCTTTTCATTCAGTTA ACGAGAAAGTGAACGAATTTGAAGGGTCAAAGGAAAAATTTTTAGGACAGTATGGAAGTATTTCTAATCCAAATGCTCTT ATTACAGGAGAAATTTCAAACACTTATGGAAAGTGGGAAGATTCCATTGCCAGCTTAAAAAATGAAATAATTTTAAAACC AGGAGAAGAAAAAACGTTGATTTATCTACTTGGGGCTGTTTCCAAAAAAAATACAAACGAAAGCGTGAGTTCACTTGTTA AAAAATATCAGACGGTAGAAAAGGTAGACGAAGAATTCGAAAAAGTAAAAGATATGTGGAGAGAAATGCTTTCAAAGTTT ATTGTTGAAACCCCCGATAAAGCCTTGAATTTTATGCTGAATAACTGGTTAAAGTACCAAGCTATTTCAGGGAGGTTATG GGGAAGGTCTGCTTATTATCAAACTGGTGGAGCGTACGGCTTTAGAGATCAACTTCAAGATAGTCAGATATTTTTGTATG TGGATCCTGAACAAACCAAAAATCAAATAAAACTTCACGCAGCTCACCAATTCAAAGATGGAAGTGTTTACCATTGGTGG CATCCGATTTCTGAACTCGGTTACAAGAATAATATATCGGATAACAGATTATGGTTGCCTTTTGTTGTCTTAAGGTTTTT AAAAGAAACTAATGATTTAGAATTTTTGAGAGAAAATATAAAGTTCCTGGATGGTGGGGAATCTTCTTTATACGACCATT GTATTAGAGCAATTCACTACAATTTAAATCATATGAGCCAAAGAGGACTTCCTTTAATAGGTGATGGAGACTGGAATGAT GGTATGAACGCTGTTGGCACCCAGGGTAAAGGGGAAAGTGTTTGGCTTGGACATTTCTTGTACGGTATTTTAAAAGATTT CTCTGTTGTCTGTAAGAAAATGGGAGATTTAGCAAATACGCAAAGGTTTATGGACGAAGCTGAAAAGCTTAAAGAAAACA TCAACAAATACGCCTGGGATGGAGAATGGTACGTAAGGGCATTCAAAGACAACGGGGAACCAATTGGAAGCAAACAAAAT AGTGAAGGTAAGATATTTTTAAATGCACAAACTTGGGCAATAATCAACGGTACTGCAACACAAACACGAAGTGAATCAGC TTATCAATCAGCAAAAAAGTACCTGTTTAAAGATTATGGTCCACTTCTTTTTCAACCGGCATTTGCAAAACCTGATCCAG AAATTGGATATCTAAGCAGATACGCCGCGGGAGTTAGAGAAAATGGTGGGTTATACACTCACGCAGGTACTTGGGCGATA TTAGCAGCTGCAAAGATGAAAGATCCTGATACATATAAAATCTACAAAAGTTTCATGCCCATTTATAGGGGTTTGGAACC TGATAAATACTTAGCTGAACCATATGTTACTCCAGGTAACGTTGATGGACCAGATTCTCCCTATTTTGGAAGAGGAGGGT GGACTTGGTATACAGGATCGGCAGCTTGGTATTTCATAGTAGCAGTTGAGGGAATTTTTGGACTAAAAGCCGAATGGGAA GGATTAAAAATAGAACCCTTGTTCCCAGAAGATTGGAAAGAAGTAAAAGTAAAGAGAATGTACAGGGGAAAACAATTGAA CATAACTTACAAAAAAAGTGATGAGAAAAAAATCATAGTTAACGGTGTGAAAATCGATGGAAACATTATTAAGCCAGAAT TATTTGAAGAAAGTTTTTTGGAAGTTGAGGTACTTTTTTAG
Upstream 100 bases:
>100_bases AAGTTTTATTTTCCTTATGGGTGGGGAGCGGGGCAAAGGGGCGCTGAAATCAGTTTTAATAGACTTTATAACAGTAATTT TAAAAATCAGGAGGGAATAT
Downstream 100 bases:
>100_bases AAAAATATCAAAATTTAGAAATTTAAGAAATAAAGGGATTATGGGTTGGGAAGGAATAAAGATAAACAAGTTTTAGAGTT TTAAAAAAACAGTAAAATTA
Product: glycosyltransferase 36
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 786; Mature: 786
Protein sequence:
>786_residues MFETKYGYFTDDGKEFVITTPKTPKPWINVISNGDYGMIISQSGSGYSWRTHASLNRITRWEQDLIKDEWGKYIYIKDET RGDFWSPSWKPTCKEPQEYEARHGQGYSIFETKYFDIKTNLTMFVSKDDPVEIWKLTIKNTSEKERKLSVYTYLEWNLGA APDWHREFHKTFIETDFLNDLNCITAEKRMWEIPNEKGQHWNRNWEYTAFHSVNEKVNEFEGSKEKFLGQYGSISNPNAL ITGEISNTYGKWEDSIASLKNEIILKPGEEKTLIYLLGAVSKKNTNESVSSLVKKYQTVEKVDEEFEKVKDMWREMLSKF IVETPDKALNFMLNNWLKYQAISGRLWGRSAYYQTGGAYGFRDQLQDSQIFLYVDPEQTKNQIKLHAAHQFKDGSVYHWW HPISELGYKNNISDNRLWLPFVVLRFLKETNDLEFLRENIKFLDGGESSLYDHCIRAIHYNLNHMSQRGLPLIGDGDWND GMNAVGTQGKGESVWLGHFLYGILKDFSVVCKKMGDLANTQRFMDEAEKLKENINKYAWDGEWYVRAFKDNGEPIGSKQN SEGKIFLNAQTWAIINGTATQTRSESAYQSAKKYLFKDYGPLLFQPAFAKPDPEIGYLSRYAAGVRENGGLYTHAGTWAI LAAAKMKDPDTYKIYKSFMPIYRGLEPDKYLAEPYVTPGNVDGPDSPYFGRGGWTWYTGSAAWYFIVAVEGIFGLKAEWE GLKIEPLFPEDWKEVKVKRMYRGKQLNITYKKSDEKKIIVNGVKIDGNIIKPELFEESFLEVEVLF
Sequences:
>Translated_786_residues MFETKYGYFTDDGKEFVITTPKTPKPWINVISNGDYGMIISQSGSGYSWRTHASLNRITRWEQDLIKDEWGKYIYIKDET RGDFWSPSWKPTCKEPQEYEARHGQGYSIFETKYFDIKTNLTMFVSKDDPVEIWKLTIKNTSEKERKLSVYTYLEWNLGA APDWHREFHKTFIETDFLNDLNCITAEKRMWEIPNEKGQHWNRNWEYTAFHSVNEKVNEFEGSKEKFLGQYGSISNPNAL ITGEISNTYGKWEDSIASLKNEIILKPGEEKTLIYLLGAVSKKNTNESVSSLVKKYQTVEKVDEEFEKVKDMWREMLSKF IVETPDKALNFMLNNWLKYQAISGRLWGRSAYYQTGGAYGFRDQLQDSQIFLYVDPEQTKNQIKLHAAHQFKDGSVYHWW HPISELGYKNNISDNRLWLPFVVLRFLKETNDLEFLRENIKFLDGGESSLYDHCIRAIHYNLNHMSQRGLPLIGDGDWND GMNAVGTQGKGESVWLGHFLYGILKDFSVVCKKMGDLANTQRFMDEAEKLKENINKYAWDGEWYVRAFKDNGEPIGSKQN SEGKIFLNAQTWAIINGTATQTRSESAYQSAKKYLFKDYGPLLFQPAFAKPDPEIGYLSRYAAGVRENGGLYTHAGTWAI LAAAKMKDPDTYKIYKSFMPIYRGLEPDKYLAEPYVTPGNVDGPDSPYFGRGGWTWYTGSAAWYFIVAVEGIFGLKAEWE GLKIEPLFPEDWKEVKVKRMYRGKQLNITYKKSDEKKIIVNGVKIDGNIIKPELFEESFLEVEVLF >Mature_786_residues MFETKYGYFTDDGKEFVITTPKTPKPWINVISNGDYGMIISQSGSGYSWRTHASLNRITRWEQDLIKDEWGKYIYIKDET RGDFWSPSWKPTCKEPQEYEARHGQGYSIFETKYFDIKTNLTMFVSKDDPVEIWKLTIKNTSEKERKLSVYTYLEWNLGA APDWHREFHKTFIETDFLNDLNCITAEKRMWEIPNEKGQHWNRNWEYTAFHSVNEKVNEFEGSKEKFLGQYGSISNPNAL ITGEISNTYGKWEDSIASLKNEIILKPGEEKTLIYLLGAVSKKNTNESVSSLVKKYQTVEKVDEEFEKVKDMWREMLSKF IVETPDKALNFMLNNWLKYQAISGRLWGRSAYYQTGGAYGFRDQLQDSQIFLYVDPEQTKNQIKLHAAHQFKDGSVYHWW HPISELGYKNNISDNRLWLPFVVLRFLKETNDLEFLRENIKFLDGGESSLYDHCIRAIHYNLNHMSQRGLPLIGDGDWND GMNAVGTQGKGESVWLGHFLYGILKDFSVVCKKMGDLANTQRFMDEAEKLKENINKYAWDGEWYVRAFKDNGEPIGSKQN SEGKIFLNAQTWAIINGTATQTRSESAYQSAKKYLFKDYGPLLFQPAFAKPDPEIGYLSRYAAGVRENGGLYTHAGTWAI LAAAKMKDPDTYKIYKSFMPIYRGLEPDKYLAEPYVTPGNVDGPDSPYFGRGGWTWYTGSAAWYFIVAVEGIFGLKAEWE GLKIEPLFPEDWKEVKVKRMYRGKQLNITYKKSDEKKIIVNGVKIDGNIIKPELFEESFLEVEVLF
Specific function: Involved in the production of beta-(1,2)-glucan. It is involved not only in invasion but also in bacteroid development [H]
COG id: COG3459
COG function: function code G; Cellobiose phosphorylase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.tumefaciens ChvB [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR009342 - InterPro: IPR019282 - InterPro: IPR021478 - InterPro: IPR011013 - InterPro: IPR010383 - InterPro: IPR010403 [H]
Pfam domain/function: PF06204 CBM_X; PF10091 DUF2329; PF11329 DUF3131; PF06165 Glyco_transf_36; PF06205 GT36_AF [H]
EC number: NA
Molecular weight: Translated: 91202; Mature: 91202
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFETKYGYFTDDGKEFVITTPKTPKPWINVISNGDYGMIISQSGSGYSWRTHASLNRITR CCCCCCCEEECCCCEEEEECCCCCCCHHHEEECCCEEEEEECCCCCCEEEECCHHHHHHH WEQDLIKDEWGKYIYIKDETRGDFWSPSWKPTCKEPQEYEARHGQGYSIFETKYFDIKTN HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEEEEEC LTMFVSKDDPVEIWKLTIKNTSEKERKLSVYTYLEWNLGAAPDWHREFHKTFIETDFLND EEEEEECCCCEEEEEEEECCCCCHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC LNCITAEKRMWEIPNEKGQHWNRNWEYTAFHSVNEKVNEFEGSKEKFLGQYGSISNPNAL CHHEEHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCHHHHHHHCCCCCCCCEE ITGEISNTYGKWEDSIASLKNEIILKPGEEKTLIYLLGAVSKKNTNESVSSLVKKYQTVE EEECCCCCCCCHHHHHHHHCCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH KVDEEFEKVKDMWREMLSKFIVETPDKALNFMLNNWLKYQAISGRLWGRSAYYQTGGAYG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCEECCCCEEECCCCCCC FRDQLQDSQIFLYVDPEQTKNQIKLHAAHQFKDGSVYHWWHPISELGYKNNISDNRLWLP CHHHCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEECCHHHCCCCCCCCCCEEEHH FVVLRFLKETNDLEFLRENIKFLDGGESSLYDHCIRAIHYNLNHMSQRGLPLIGDGDWND HHHHHHHHCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHCHHHHHHCCCCEEECCCCCC GMNAVGTQGKGESVWLGHFLYGILKDFSVVCKKMGDLANTQRFMDEAEKLKENINKYAWD CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC GEWYVRAFKDNGEPIGSKQNSEGKIFLNAQTWAIINGTATQTRSESAYQSAKKYLFKDYG CCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCC PLLFQPAFAKPDPEIGYLSRYAAGVRENGGLYTHAGTWAILAAAKMKDPDTYKIYKSFMP CCEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCEEEEEEHHCCCCCHHHHHHHHHH IYRGLEPDKYLAEPYVTPGNVDGPDSPYFGRGGWTWYTGSAAWYFIVAVEGIFGLKAEWE HHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECHHHCCCCCCC GLKIEPLFPEDWKEVKVKRMYRGKQLNITYKKSDEKKIIVNGVKIDGNIIKPELFEESFL CEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCEECHHHHCCCCC EVEVLF EEEEEC >Mature Secondary Structure MFETKYGYFTDDGKEFVITTPKTPKPWINVISNGDYGMIISQSGSGYSWRTHASLNRITR CCCCCCCEEECCCCEEEEECCCCCCCHHHEEECCCEEEEEECCCCCCEEEECCHHHHHHH WEQDLIKDEWGKYIYIKDETRGDFWSPSWKPTCKEPQEYEARHGQGYSIFETKYFDIKTN HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEEEEEC LTMFVSKDDPVEIWKLTIKNTSEKERKLSVYTYLEWNLGAAPDWHREFHKTFIETDFLND EEEEEECCCCEEEEEEEECCCCCHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC LNCITAEKRMWEIPNEKGQHWNRNWEYTAFHSVNEKVNEFEGSKEKFLGQYGSISNPNAL CHHEEHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCHHHHHHHCCCCCCCCEE ITGEISNTYGKWEDSIASLKNEIILKPGEEKTLIYLLGAVSKKNTNESVSSLVKKYQTVE EEECCCCCCCCHHHHHHHHCCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH KVDEEFEKVKDMWREMLSKFIVETPDKALNFMLNNWLKYQAISGRLWGRSAYYQTGGAYG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCEECCCCEEECCCCCCC FRDQLQDSQIFLYVDPEQTKNQIKLHAAHQFKDGSVYHWWHPISELGYKNNISDNRLWLP CHHHCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEECCHHHCCCCCCCCCCEEEHH FVVLRFLKETNDLEFLRENIKFLDGGESSLYDHCIRAIHYNLNHMSQRGLPLIGDGDWND HHHHHHHHCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHCHHHHHHCCCCEEECCCCCC GMNAVGTQGKGESVWLGHFLYGILKDFSVVCKKMGDLANTQRFMDEAEKLKENINKYAWD CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC GEWYVRAFKDNGEPIGSKQNSEGKIFLNAQTWAIINGTATQTRSESAYQSAKKYLFKDYG CCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCC PLLFQPAFAKPDPEIGYLSRYAAGVRENGGLYTHAGTWAILAAAKMKDPDTYKIYKSFMP CCEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCEEEEEEHHCCCCCHHHHHHHHHH IYRGLEPDKYLAEPYVTPGNVDGPDSPYFGRGGWTWYTGSAAWYFIVAVEGIFGLKAEWE HHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECHHHCCCCCCC GLKIEPLFPEDWKEVKVKRMYRGKQLNITYKKSDEKKIIVNGVKIDGNIIKPELFEESFL CEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCEECHHHHCCCCC EVEVLF EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2154461; 11481430 [H]