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The map label for this gene is ycjN [C]

Identifier: 160902418

GI number: 160902418

Start: 1013687

End: 1014886

Strand: Direct

Name: ycjN [C]

Synonym: Pmob_0954

Alternate gene names: 160902418

Gene position: 1013687-1014886 (Clockwise)

Preceding gene: 160902417

Following gene: 160902419

Centisome position: 46.72

GC content: 39.75

Gene sequence:

>1200_bases
ATGAGAAAGACTTTGGTTGTTTTGAGTGTTGTGATGATGTTGGTTTCCTTGAATTTTGGTGCAACAAAGATAACAGTGTG
GGGTATGGGTCAGGGAAAAAGTTTGGAGCAATTGTCAAAACTTTTTATGGAAGAATACCCCGAATATGAGGTAGATTTCC
AAGCCATACCTTGGTCAAATGCCTACGAAAAAATTTTAACATCAATCGCTGGCAGACAAGTCCCGGATGTTGCACAGATG
GGAACAACTTGGATGGCTCCGTTTGGAAGCATGGGGGCATTTGAAGATTTAGCTCCATATATTGAAAGTTCAGAAGTTGT
AAAACCAGAGAATTTTTTCGAGGGAGCATGGGAAACAGGAATAGTTGATGGAAAGCAGTTTGGTATTCCTTGGCATGTGG
ATGTTAGAGCTATGTTCTATAGAACAGATTTATTAGCACAAGTAGGTTACGATCATGCTCCTCAAACCTGGGATGAGTTG
TACGATGCGGTAAAAAAACTACATGAAAACGGCAGTAGATATGGCATAGCGCTTTACCAACCTCAGGATAATTACCAAAC
TTTTTTCCCCTTTGTTTGGCAAAATGGAGGAGATATATTAGACAGCCAAGGAAATGTGACAGTGGATCAACATGAATTCG
TTGAGGCTCTTGAGTATTATACGAGATTTTTCACAGAAGGGTTGACCCCTATTTCGGGAAGCGGTAACATATTCCAAGAT
TTTGCTTCAGGAGATACCCCAATTTATTTTTCAGGTCCATGGATGATTAATATGACTAGAGATCAAACACCCCAAATAGA
TGGTAAGTGGGATGTTGCGTTAATGCCTGAGAAAAAAAGTAGAACATCCTTTATGGGAGGTAGTGATTTAGTAATTTTCA
GGGATTCCAAAAACAAAGAAGGTGCTTGGAAGTTCATAGAGTTTGCATCGAGACCTGAAAACCAACTGTTGGCCTATCAA
ATTACAAATGAACTACCTGCAGCCAGACAAGCATGGGAAGATCCTTTATTACAAGCAGATCCCATGATAGCAACGTTCGG
TGAACAGTTGAATGATGCTAAAGCTCCTGTAAACGTTCCCGAATTTCATGAGATTGCAGCTGCAATTGATAGGATGGTTC
AAGAAGTGATTTATGGCAGAAAAACACCGGAACAAGCAGCTCAGGATTTGAAAAAAGAAATTGAAAAGATACTGAAATAA

Upstream 100 bases:

>100_bases
ATTTAAGAAATAAAGGGATTATGGGTTGGGAAGGAATAAAGATAAACAAGTTTTAGAGTTTTAAAAAAACAGTAAAATTA
CTAGTAGGAGGTGTGGAAAG

Downstream 100 bases:

>100_bases
TTTGTTTCATGCCCCTCTTTTTATGCAAAAAGAGGGGCTTTGATCAAAACTTTTTGATTATCGAGGAGAGATAAAATTGA
AGACCCCAATAAGAGCAATT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MRKTLVVLSVVMMLVSLNFGATKITVWGMGQGKSLEQLSKLFMEEYPEYEVDFQAIPWSNAYEKILTSIAGRQVPDVAQM
GTTWMAPFGSMGAFEDLAPYIESSEVVKPENFFEGAWETGIVDGKQFGIPWHVDVRAMFYRTDLLAQVGYDHAPQTWDEL
YDAVKKLHENGSRYGIALYQPQDNYQTFFPFVWQNGGDILDSQGNVTVDQHEFVEALEYYTRFFTEGLTPISGSGNIFQD
FASGDTPIYFSGPWMINMTRDQTPQIDGKWDVALMPEKKSRTSFMGGSDLVIFRDSKNKEGAWKFIEFASRPENQLLAYQ
ITNELPAARQAWEDPLLQADPMIATFGEQLNDAKAPVNVPEFHEIAAAIDRMVQEVIYGRKTPEQAAQDLKKEIEKILK

Sequences:

>Translated_399_residues
MRKTLVVLSVVMMLVSLNFGATKITVWGMGQGKSLEQLSKLFMEEYPEYEVDFQAIPWSNAYEKILTSIAGRQVPDVAQM
GTTWMAPFGSMGAFEDLAPYIESSEVVKPENFFEGAWETGIVDGKQFGIPWHVDVRAMFYRTDLLAQVGYDHAPQTWDEL
YDAVKKLHENGSRYGIALYQPQDNYQTFFPFVWQNGGDILDSQGNVTVDQHEFVEALEYYTRFFTEGLTPISGSGNIFQD
FASGDTPIYFSGPWMINMTRDQTPQIDGKWDVALMPEKKSRTSFMGGSDLVIFRDSKNKEGAWKFIEFASRPENQLLAYQ
ITNELPAARQAWEDPLLQADPMIATFGEQLNDAKAPVNVPEFHEIAAAIDRMVQEVIYGRKTPEQAAQDLKKEIEKILK
>Mature_399_residues
MRKTLVVLSVVMMLVSLNFGATKITVWGMGQGKSLEQLSKLFMEEYPEYEVDFQAIPWSNAYEKILTSIAGRQVPDVAQM
GTTWMAPFGSMGAFEDLAPYIESSEVVKPENFFEGAWETGIVDGKQFGIPWHVDVRAMFYRTDLLAQVGYDHAPQTWDEL
YDAVKKLHENGSRYGIALYQPQDNYQTFFPFVWQNGGDILDSQGNVTVDQHEFVEALEYYTRFFTEGLTPISGSGNIFQD
FASGDTPIYFSGPWMINMTRDQTPQIDGKWDVALMPEKKSRTSFMGGSDLVIFRDSKNKEGAWKFIEFASRPENQLLAYQ
ITNELPAARQAWEDPLLQADPMIATFGEQLNDAKAPVNVPEFHEIAAAIDRMVQEVIYGRKTPEQAAQDLKKEIEKILK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=220, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45269; Mature: 45269

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTLVVLSVVMMLVSLNFGATKITVWGMGQGKSLEQLSKLFMEEYPEYEVDFQAIPWSN
CCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCH
AYEKILTSIAGRQVPDVAQMGTTWMAPFGSMGAFEDLAPYIESSEVVKPENFFEGAWETG
HHHHHHHHHHCCCCCCHHHHCCHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCC
IVDGKQFGIPWHVDVRAMFYRTDLLAQVGYDHAPQTWDELYDAVKKLHENGSRYGIALYQ
CCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEC
PQDNYQTFFPFVWQNGGDILDSQGNVTVDQHEFVEALEYYTRFFTEGLTPISGSGNIFQD
CCCCCCEEEEEEECCCCCEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FASGDTPIYFSGPWMINMTRDQTPQIDGKWDVALMPEKKSRTSFMGGSDLVIFRDSKNKE
HCCCCCCEEECCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCC
GAWKFIEFASRPENQLLAYQITNELPAARQAWEDPLLQADPMIATFGEQLNDAKAPVNVP
CHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCC
EFHEIAAAIDRMVQEVIYGRKTPEQAAQDLKKEIEKILK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKTLVVLSVVMMLVSLNFGATKITVWGMGQGKSLEQLSKLFMEEYPEYEVDFQAIPWSN
CCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCH
AYEKILTSIAGRQVPDVAQMGTTWMAPFGSMGAFEDLAPYIESSEVVKPENFFEGAWETG
HHHHHHHHHHCCCCCCHHHHCCHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCC
IVDGKQFGIPWHVDVRAMFYRTDLLAQVGYDHAPQTWDELYDAVKKLHENGSRYGIALYQ
CCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEC
PQDNYQTFFPFVWQNGGDILDSQGNVTVDQHEFVEALEYYTRFFTEGLTPISGSGNIFQD
CCCCCCEEEEEEECCCCCEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
FASGDTPIYFSGPWMINMTRDQTPQIDGKWDVALMPEKKSRTSFMGGSDLVIFRDSKNKE
HCCCCCCEEECCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCC
GAWKFIEFASRPENQLLAYQITNELPAARQAWEDPLLQADPMIATFGEQLNDAKAPVNVP
CHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCC
EFHEIAAAIDRMVQEVIYGRKTPEQAAQDLKKEIEKILK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA