Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is add [H]
Identifier: 160877595
GI number: 160877595
Start: 5307955
End: 5308950
Strand: Reverse
Name: add [H]
Synonym: Sbal195_4494
Alternate gene names: 160877595
Gene position: 5308950-5307955 (Counterclockwise)
Preceding gene: 160877598
Following gene: 160877587
Centisome position: 99.28
GC content: 46.29
Gene sequence:
>996_bases ATGATTGATACATCCATTCCATTGGTGGATCTGCATCGTCACCTAGACGGTAATGTGCGAGTAAACACCATTTGGGAACT AGGACACCAACACGGCATTGCGCTACCTGCCGATTCTTTAGAGACTCTCGCACCTTTTGTGCAAATTCAGGGGAAAGAAA CTAGCTTAGTCGCCTTCTTAAAGAAGCTCGATTGGATGGTTGGCGTACTCGCTGACTTGGATGCGGTTAAACGCGTTGCC TATGAAAACGTTGCCGATGCGGCATTGTCTGGCTTAGATTACGCTGAGTTACGTTTTAGTCCTTACTATATGGCGATGAA CCATAAGTTACCGATTGAAGGCGTAGTTGAAGCAGTAGTCGACGGCGTTAAAGCGGGCTTAAAAGACTATAACGTGAAGA TCAATTTGATTGGTATTTTGTCACGTTCATTCGGTCAAGCCGCTTGTACTCAAGAACTTGAAGGCTTACTTACCCATAAA CAACATCTCGTGGCTATGGACTTAGCTGGCGATGAAATGGGTTTCCCTGGCGAGTTATTTAACGAGCACTTTAAACGTGT TCGTGATGCAGATCTTGCGATTACGGCTCACGCCGGTGAAGCCGCGGGTTCACAAAGTATGTGGCAAGCGATTCAAGAAC TTGGCGCGACGCGAATTGGCCACGGGGTGAACGCGATTCACGATCCTAAGTTGATGGAATATCTCGCTAAGCACCGTATT GGTATCGAATCTTGCCCAACCAGTAACTTGCATACTTCTACAGTCGCTTCTTACGCTGACCATCCTTTTAGAACTTTTAT GGATGCAGGCGTATTGATCAACTTAAATACCGATGATCCCGGTGTGAGCGCTATCGATATTAATCATGAGTATCGTATTG CTAAATCCGAACTCAAGTTAACCGATGCTGAGTTAGCGCAGGTGCAACGCAACGGCGTTGAAATGGCGTTTTTATCCGAC AGTGAGCGTAAAGCGCTGTATGCCGCTAAGGTATAA
Upstream 100 bases:
>100_bases TTTGGCGCATAAATGCCCCTGAAAATGCGTGTTAAACTTAGTGTCCGCCCGCGACCAAATAACAAAAGCATTGGCTGGGT AGTTCAAATAGGGGTTAAAT
Downstream 100 bases:
>100_bases GCTCTGAGTCATTAATAAAAATAGCTATAAATAAAAAATCCGACTCTAGAGTCGGATTTTTTTATGAGCGTTCACGAGTA CAGCGATAGGCGCTTTAGAT
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MIDTSIPLVDLHRHLDGNVRVNTIWELGHQHGIALPADSLETLAPFVQIQGKETSLVAFLKKLDWMVGVLADLDAVKRVA YENVADAALSGLDYAELRFSPYYMAMNHKLPIEGVVEAVVDGVKAGLKDYNVKINLIGILSRSFGQAACTQELEGLLTHK QHLVAMDLAGDEMGFPGELFNEHFKRVRDADLAITAHAGEAAGSQSMWQAIQELGATRIGHGVNAIHDPKLMEYLAKHRI GIESCPTSNLHTSTVASYADHPFRTFMDAGVLINLNTDDPGVSAIDINHEYRIAKSELKLTDAELAQVQRNGVEMAFLSD SERKALYAAKV
Sequences:
>Translated_331_residues MIDTSIPLVDLHRHLDGNVRVNTIWELGHQHGIALPADSLETLAPFVQIQGKETSLVAFLKKLDWMVGVLADLDAVKRVA YENVADAALSGLDYAELRFSPYYMAMNHKLPIEGVVEAVVDGVKAGLKDYNVKINLIGILSRSFGQAACTQELEGLLTHK QHLVAMDLAGDEMGFPGELFNEHFKRVRDADLAITAHAGEAAGSQSMWQAIQELGATRIGHGVNAIHDPKLMEYLAKHRI GIESCPTSNLHTSTVASYADHPFRTFMDAGVLINLNTDDPGVSAIDINHEYRIAKSELKLTDAELAQVQRNGVEMAFLSD SERKALYAAKV >Mature_331_residues MIDTSIPLVDLHRHLDGNVRVNTIWELGHQHGIALPADSLETLAPFVQIQGKETSLVAFLKKLDWMVGVLADLDAVKRVA YENVADAALSGLDYAELRFSPYYMAMNHKLPIEGVVEAVVDGVKAGLKDYNVKINLIGILSRSFGQAACTQELEGLLTHK QHLVAMDLAGDEMGFPGELFNEHFKRVRDADLAITAHAGEAAGSQSMWQAIQELGATRIGHGVNAIHDPKLMEYLAKHRI GIESCPTSNLHTSTVASYADHPFRTFMDAGVLINLNTDDPGVSAIDINHEYRIAKSELKLTDAELAQVQRNGVEMAFLSD SERKALYAAKV
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=338, Percent_Identity=31.3609467455621, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI226693318, Length=334, Percent_Identity=23.0538922155689, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1787910, Length=326, Percent_Identity=60.7361963190184, Blast_Score=419, Evalue=1e-118, Organism=Caenorhabditis elegans, GI32565969, Length=334, Percent_Identity=29.3413173652695, Blast_Score=110, Evalue=9e-25, Organism=Caenorhabditis elegans, GI17538512, Length=334, Percent_Identity=29.3413173652695, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI115537133, Length=332, Percent_Identity=25.9036144578313, Blast_Score=68, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6324188, Length=326, Percent_Identity=24.5398773006135, Blast_Score=103, Evalue=3e-23, Organism=Drosophila melanogaster, GI24645260, Length=323, Percent_Identity=23.2198142414861, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 36249; Mature: 36249
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTSIPLVDLHRHLDGNVRVNTIWELGHQHGIALPADSLETLAPFVQIQGKETSLVAFL CCCCCCCHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCHHHHHHH KKLDWMVGVLADLDAVKRVAYENVADAALSGLDYAELRFSPYYMAMNHKLPIEGVVEAVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCCCHHHHHHHHH DGVKAGLKDYNVKINLIGILSRSFGQAACTQELEGLLTHKQHLVAMDLAGDEMGFPGELF HHHHHCCHHCCEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHH NEHFKRVRDADLAITAHAGEAAGSQSMWQAIQELGATRIGHGVNAIHDPKLMEYLAKHRI HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHCC GIESCPTSNLHTSTVASYADHPFRTFMDAGVLINLNTDDPGVSAIDINHEYRIAKSELKL CCCCCCCCCCCHHHHHHHCCCCHHHHHCCCEEEEECCCCCCCEEEECCCCEEEEHHHHHC TDAELAQVQRNGVEMAFLSDSERKALYAAKV CHHHHHHHHHCCCEEEEECCCCCCEEEEECC >Mature Secondary Structure MIDTSIPLVDLHRHLDGNVRVNTIWELGHQHGIALPADSLETLAPFVQIQGKETSLVAFL CCCCCCCHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCHHHHHHH KKLDWMVGVLADLDAVKRVAYENVADAALSGLDYAELRFSPYYMAMNHKLPIEGVVEAVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCCCHHHHHHHHH DGVKAGLKDYNVKINLIGILSRSFGQAACTQELEGLLTHKQHLVAMDLAGDEMGFPGELF HHHHHCCHHCCEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHH NEHFKRVRDADLAITAHAGEAAGSQSMWQAIQELGATRIGHGVNAIHDPKLMEYLAKHRI HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHCC GIESCPTSNLHTSTVASYADHPFRTFMDAGVLINLNTDDPGVSAIDINHEYRIAKSELKL CCCCCCCCCCCHHHHHHHCCCCHHHHHCCCEEEEECCCCCCCEEEECCCCEEEEHHHHHC TDAELAQVQRNGVEMAFLSDSERKALYAAKV CHHHHHHHHHCCCEEEEECCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA