Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is engB
Identifier: 160877587
GI number: 160877587
Start: 5300816
End: 5301475
Strand: Reverse
Name: engB
Synonym: Sbal195_4486
Alternate gene names: 160877587
Gene position: 5301475-5300816 (Counterclockwise)
Preceding gene: 160877595
Following gene: 160877585
Centisome position: 99.14
GC content: 43.94
Gene sequence:
>660_bases GTGACTGAATCTCGTATAGATTTTCGTAGGGCAAAGTTTTTAATCAGTGCACCTGACATTGCACATTTGGATCAATATCT GCCCGGCGATGTTGGAGTTGAGATTGCATTTGCTGGCCGCTCTAATGCTGGAAAGTCTAGTGCACTCAATGCATTAACTG AGCAAAAAAGTTTAGCAAGAACCAGTAAAACCCCTGGTCGAACTCAATTAATTAACGTATTTGAGTTAGATGCTCAGCGT CGTTTAGTTGACTTACCTGGCTATGGTTTTGCACAAGTCCCGCTTGCGTTGAAAAATAAATGGCAGCAGGCATTAGGTGA ATATTTGCAAAAACGCGCTTGTTTAAGTGGCGTGGTTGTCTTGATGGATATACGTCATCCACTAAAAGATCTCGATATGC AGATGATCGAGTGGGCGGTTGCCAGTGAAATCCCTGTGTTAGCTTTGCTGACCAAGTCAGACAAATTAGCTCAAAGCGCT AAGATGAAAACCGTAAATGAAGTGCGTCTGGCGTTGAGTGAGTTTGGTGACTGGGTACAAGTTGAGCCTTTCTCATCGCT TAAAGGAACCGGTAAGCCTAAAGTGTTGGCTATTCTAAATGAATGGTGCCATCCGCAATGGTTGACCGATGAGTTAGATG CGGCGAACAACGCCGAATAA
Upstream 100 bases:
>100_bases ATGATTAATGTGATCGGAGTAATATTTTACACGAAAACGTGGAAAAGTAAGTAATTCTTCATAAATTATGGTATTGCGTA GAAAAATTTCGGAGTAAATA
Downstream 100 bases:
>100_bases TATTGCCTGTTTTGGCATACATGGTCGAGTTTGACTGTGTATGCCGCCCCTCTGTTTTTTCCTGTAATTTTTCCTTATCT TTCCCTCTTGTTAATCTTTT
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTESRIDFRRAKFLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLARTSKTPGRTQLINVFELDAQR RLVDLPGYGFAQVPLALKNKWQQALGEYLQKRACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSA KMKTVNEVRLALSEFGDWVQVEPFSSLKGTGKPKVLAILNEWCHPQWLTDELDAANNAE
Sequences:
>Translated_219_residues MTESRIDFRRAKFLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLARTSKTPGRTQLINVFELDAQR RLVDLPGYGFAQVPLALKNKWQQALGEYLQKRACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSA KMKTVNEVRLALSEFGDWVQVEPFSSLKGTGKPKVLAILNEWCHPQWLTDELDAANNAE >Mature_218_residues TESRIDFRRAKFLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLARTSKTPGRTQLINVFELDAQRR LVDLPGYGFAQVPLALKNKWQQALGEYLQKRACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAK MKTVNEVRLALSEFGDWVQVEPFSSLKGTGKPKVLAILNEWCHPQWLTDELDAANNAE
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=165, Percent_Identity=32.1212121212121, Blast_Score=72, Evalue=4e-13, Organism=Escherichia coli, GI145693205, Length=199, Percent_Identity=63.8190954773869, Blast_Score=253, Evalue=5e-69, Organism=Saccharomyces cerevisiae, GI6320543, Length=136, Percent_Identity=32.3529411764706, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_SHEB2 (B8EDT1)
Other databases:
- EMBL: CP001252 - RefSeq: YP_002360180.1 - ProteinModelPortal: B8EDT1 - GeneID: 7089093 - GenomeReviews: CP001252_GR - KEGG: sbp:Sbal223_4291 - HOGENOM: HBG447097 - OMA: QARFFIT - ProtClustDB: PRK00454 - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 24286; Mature: 24155
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESRIDFRRAKFLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLAR CCCCHHHHHHHHEEECCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH TSKTPGRTQLINVFELDAQRRLVDLPGYGFAQVPLALKNKWQQALGEYLQKRACLSGVVV HCCCCCHHHHHHHHHHCCHHHEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRLALSEFGDWVQ HHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEE VEPFSSLKGTGKPKVLAILNEWCHPQWLTDELDAANNAE ECCCHHCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCC >Mature Secondary Structure TESRIDFRRAKFLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLAR CCCHHHHHHHHEEECCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH TSKTPGRTQLINVFELDAQRRLVDLPGYGFAQVPLALKNKWQQALGEYLQKRACLSGVVV HCCCCCHHHHHHHHHHCCHHHEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRLALSEFGDWVQ HHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEE VEPFSSLKGTGKPKVLAILNEWCHPQWLTDELDAANNAE ECCCHHCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA