| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877495
Identifier: 160877495
GI number: 160877495
Start: 5190529
End: 5191320
Strand: Direct
Name: 160877495
Synonym: Sbal195_4393
Alternate gene names: NA
Gene position: 5190529-5191320 (Clockwise)
Preceding gene: 160877492
Following gene: 160877496
Centisome position: 97.07
GC content: 48.11
Gene sequence:
>792_bases ATGGCAACACACTCAGTAAAACTGATGGCGAGCATCCTCTGCACTTTAGGCATCAACGGCCTTAGCTACAACGCATTCGC CAATGAGAGCCTAGAAAGCATCGAGAGTATTTCAAGCGCCGGAGTGCCCAGCCAGAATAGCCAAGCCTTAGCTGTAACAC TGGATTTAGGTTGGGACAGTCAATACGTCTCACAGGGTCGCAATAATCTGCAAGATGGCGGCATCTATTGGCTGAATACC GCAGTCCAGCAAGACAATATCACCGTCTACGCTTTAGTTGGCCGCGGCGATAGCCAAGCCTACACTGAGTGGAATATCGG CTTTGAATATGGGTTCGATGTGACAGAAAACCTAGAGGCCAATGTGGGATATCAACGCATTGAAGGCTACAGCAATAGCC GTTGCCACGATAACGAGTTATTTGCCGAACTCGCTTACACAGCTGAACCTTGGCTAGTACCATCGGCAAGTTATGTCTAT TCCACCGAGGCTGCGGGTTACTTTGTTGAAGTGAGTTTGCACAGTTATTGGAATATCACAGACCAGTTCAGCCTCACGCC CTATATCACTCAAGGGTTTGATTTTAAATATCGCACAGAAGAACACGATGGCCGCAATAACCTGCAATTTGGCCTAGAAG CCAATTATCAGTTGTCATCCTACATGAGTGTTAGCGGCCACATTAGCCACAGCATTGCCCAAGGTGATATTGAGCAAGAA GCGACGGCGAATGGCGATATGAGTTCGCAAGATGAGACCTATGCCGGCATCCACTTTGCGATGACGTTTTAA
Upstream 100 bases:
>100_bases GTCGGCTTGATCGCAAATCGAATCAATTCGCATTAACACTTATCTATGGGGAAGGTATTCTCGCCCTAACAAACGCATTT CTACCTAAATCAGCAAAAAT
Downstream 100 bases:
>100_bases CTCCATTCTTAGCGCTGTGGTTTTTAGCTCAGTGTTTTGTAGCGCCGTATACAACCTTCCTCTGTCAATTTATCCCGCTC CATTTGGCAAAATAACGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MATHSVKLMASILCTLGINGLSYNAFANESLESIESISSAGVPSQNSQALAVTLDLGWDSQYVSQGRNNLQDGGIYWLNT AVQQDNITVYALVGRGDSQAYTEWNIGFEYGFDVTENLEANVGYQRIEGYSNSRCHDNELFAELAYTAEPWLVPSASYVY STEAAGYFVEVSLHSYWNITDQFSLTPYITQGFDFKYRTEEHDGRNNLQFGLEANYQLSSYMSVSGHISHSIAQGDIEQE ATANGDMSSQDETYAGIHFAMTF
Sequences:
>Translated_263_residues MATHSVKLMASILCTLGINGLSYNAFANESLESIESISSAGVPSQNSQALAVTLDLGWDSQYVSQGRNNLQDGGIYWLNT AVQQDNITVYALVGRGDSQAYTEWNIGFEYGFDVTENLEANVGYQRIEGYSNSRCHDNELFAELAYTAEPWLVPSASYVY STEAAGYFVEVSLHSYWNITDQFSLTPYITQGFDFKYRTEEHDGRNNLQFGLEANYQLSSYMSVSGHISHSIAQGDIEQE ATANGDMSSQDETYAGIHFAMTF >Mature_262_residues ATHSVKLMASILCTLGINGLSYNAFANESLESIESISSAGVPSQNSQALAVTLDLGWDSQYVSQGRNNLQDGGIYWLNTA VQQDNITVYALVGRGDSQAYTEWNIGFEYGFDVTENLEANVGYQRIEGYSNSRCHDNELFAELAYTAEPWLVPSASYVYS TEAAGYFVEVSLHSYWNITDQFSLTPYITQGFDFKYRTEEHDGRNNLQFGLEANYQLSSYMSVSGHISHSIAQGDIEQEA TANGDMSSQDETYAGIHFAMTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29174; Mature: 29043
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHSVKLMASILCTLGINGLSYNAFANESLESIESISSAGVPSQNSQALAVTLDLGWDS CCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCH QYVSQGRNNLQDGGIYWLNTAVQQDNITVYALVGRGDSQAYTEWNIGFEYGFDVTENLEA HHHHCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCEEEECCCEEECCCCCCCCCC NVGYQRIEGYSNSRCHDNELFAELAYTAEPWLVPSASYVYSTEAAGYFVEVSLHSYWNIT CCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCEECCC DQFSLTPYITQGFDFKYRTEEHDGRNNLQFGLEANYQLSSYMSVSGHISHSIAQGDIEQE CCEECCEEEECCCCEEEECCCCCCCCCEEEEEECCEEEEEEEEECCCHHHHHHCCCCCHH ATANGDMSSQDETYAGIHFAMTF HCCCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure ATHSVKLMASILCTLGINGLSYNAFANESLESIESISSAGVPSQNSQALAVTLDLGWDS CCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCH QYVSQGRNNLQDGGIYWLNTAVQQDNITVYALVGRGDSQAYTEWNIGFEYGFDVTENLEA HHHHCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCEEEECCCEEECCCCCCCCCC NVGYQRIEGYSNSRCHDNELFAELAYTAEPWLVPSASYVYSTEAAGYFVEVSLHSYWNIT CCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCEECCC DQFSLTPYITQGFDFKYRTEEHDGRNNLQFGLEANYQLSSYMSVSGHISHSIAQGDIEQE CCEECCEEEECCCCEEEECCCCCCCCCEEEEEECCEEEEEEEEECCCHHHHHHCCCCCHH ATANGDMSSQDETYAGIHFAMTF HCCCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA