| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160877496
Identifier: 160877496
GI number: 160877496
Start: 5191488
End: 5192051
Strand: Direct
Name: 160877496
Synonym: Sbal195_4394
Alternate gene names: NA
Gene position: 5191488-5192051 (Clockwise)
Preceding gene: 160877495
Following gene: 160877497
Centisome position: 97.09
GC content: 50.0
Gene sequence:
>564_bases ATGTTAGCCCAGCACTTTTATCTCATCCGCACCGCCGTTATTGCCTTACTTCTGCTTTTTCTCCCAGTCATACACTCGGC TGACGCACGGCAATTACTTGAACTTGAGCCTGAATCTGAACCGAGTCTAGAGTCCTTATCGCAATCGAAACAAACCGCGC CTTTGCCCCTAGGCACCTTGCTCGACAGTGAGGGCAAACCGATTAATCTACCTGACCAAGAGCAAAGCAGTTTCGAGTAT TCGGCTCCCACTCTCACGCCGACTGAGTCATCCAAAACCACTAAATCAACTAAAGCCACGCAATCGACCAAAGCCACTAA GAGTAAAAAACTCAGCCGCAAGCAACAACTTGCCAGCCGTGAACACGTAGCCAATGATCCCAACTGCCGCTGGCTCGATA AACGTATGGATCAGTTAGAAGCGCAACTCGGCGGCAAACAAGATAATGCCGCTACGCATCAAGCCGACGAACTCAGCGCC CGCCAAAAGGAATGGCAATGTTTGAAATGTGACGCAGAAGGTCCAGCTCAAAACGATCACTCTAATTGCCAATATCGCCG CTAG
Upstream 100 bases:
>100_bases ATTTATCCCGCTCCATTTGGCAAAATAACGCTCACTAACTACACTCAAAACGTCGACGGAACGACTCACCATTCATATCG ATTTTACCGAGGAACAGGGA
Downstream 100 bases:
>100_bases ACGCCCACCCGATGAACAGCTGATGCCCAGTTCGGGTAAGTGTAAAGTTCGGGATCTTTTTCAGTCAAAGTACGGTCTCA TGCGTTAGTCATGCAATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLAQHFYLIRTAVIALLLLFLPVIHSADARQLLELEPESEPSLESLSQSKQTAPLPLGTLLDSEGKPINLPDQEQSSFEY SAPTLTPTESSKTTKSTKATQSTKATKSKKLSRKQQLASREHVANDPNCRWLDKRMDQLEAQLGGKQDNAATHQADELSA RQKEWQCLKCDAEGPAQNDHSNCQYRR
Sequences:
>Translated_187_residues MLAQHFYLIRTAVIALLLLFLPVIHSADARQLLELEPESEPSLESLSQSKQTAPLPLGTLLDSEGKPINLPDQEQSSFEY SAPTLTPTESSKTTKSTKATQSTKATKSKKLSRKQQLASREHVANDPNCRWLDKRMDQLEAQLGGKQDNAATHQADELSA RQKEWQCLKCDAEGPAQNDHSNCQYRR >Mature_187_residues MLAQHFYLIRTAVIALLLLFLPVIHSADARQLLELEPESEPSLESLSQSKQTAPLPLGTLLDSEGKPINLPDQEQSSFEY SAPTLTPTESSKTTKSTKATQSTKATKSKKLSRKQQLASREHVANDPNCRWLDKRMDQLEAQLGGKQDNAATHQADELSA RQKEWQCLKCDAEGPAQNDHSNCQYRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20885; Mature: 20885
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAQHFYLIRTAVIALLLLFLPVIHSADARQLLELEPESEPSLESLSQSKQTAPLPLGTL CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHH LDSEGKPINLPDQEQSSFEYSAPTLTPTESSKTTKSTKATQSTKATKSKKLSRKQQLASR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EHVANDPNCRWLDKRMDQLEAQLGGKQDNAATHQADELSARQKEWQCLKCDAEGPAQNDH HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCCC SNCQYRR CCCCCCC >Mature Secondary Structure MLAQHFYLIRTAVIALLLLFLPVIHSADARQLLELEPESEPSLESLSQSKQTAPLPLGTL CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHH LDSEGKPINLPDQEQSSFEYSAPTLTPTESSKTTKSTKATQSTKATKSKKLSRKQQLASR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EHVANDPNCRWLDKRMDQLEAQLGGKQDNAATHQADELSARQKEWQCLKCDAEGPAQNDH HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCCC SNCQYRR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA