| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is sspA [C]
Identifier: 160877492
GI number: 160877492
Start: 5186842
End: 5187489
Strand: Direct
Name: sspA [C]
Synonym: Sbal195_4390
Alternate gene names: 160877492
Gene position: 5186842-5187489 (Clockwise)
Preceding gene: 160877490
Following gene: 160877495
Centisome position: 97.0
GC content: 43.83
Gene sequence:
>648_bases ATGGAGCTTTTTTATCACCCCTTATCTCGCTATTCACAAAAGGTGCTGATCGCACTTTATGAAAAGCAGGCCAATTTCTA CCCCAGAATCATAGATCTGCGCGACCCTTTTTCACGCAAGGAATTTCACCAAACCTATCCGCAGGCAAGAGTTCCCCTGC TAAAAACCCACGATGAGCTGCTTGTTCCCGAATCCAGCATTATTATTGAATACTTAGATAGGCATTTTAATAACAGTACC CAGCTGCTGCCCCAAGAACCGCAACGCAACTTACAGGTGCGTTTGTTCGATCGCATCATAGACAATGATATTAATAACCC ATTATTTCAATTAGAAAAGTTGAAGCATACCGAGGACAGTAACGAGTTCGAAATCAAACAATTAGAGAAACAACTACTGG TACAATTTCAACGTTTAGACACGCAACTCACGCAACACCATTGGGTTTGCGGCGACAGTTTCACCTTAGCCGACTGCGCC CTAATCCCTTGTTTAAGTTATAGCTTTCAACACTTAAATCTATTGGATTTGGATGAAATCGTGCGCTATTGGCAGCAGGC ACAATTGCGCGGCGCTTGGATGTTAGTACAAGAAGAGGTGTTGCTGGCTGAAATGGAGGAAACGGCGGGAATAAGAGGCA TACCTTAG
Upstream 100 bases:
>100_bases ATCCCTGCATTTTTTAGAAAAACTCTTACAGCAAGCACCTTAATTACGACTAAAGTTAAGGCGTAAAGTCAGTAAAATTC AGGGTTTGGAGTTAGTGCCT
Downstream 100 bases:
>100_bases CGGGGTAAGTCATGCCTCAACAAGATCACATATTGCGTTCTTTCTTCAACTGCAAAAACGCTTTCCACTTCACGACTTCT GGCGGCAACTCAGGTGCAGC
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Ta Family; Glutathione S-Transferase C-Terminal Domain Protein; Glutathione S-Transferase Domain
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MELFYHPLSRYSQKVLIALYEKQANFYPRIIDLRDPFSRKEFHQTYPQARVPLLKTHDELLVPESSIIIEYLDRHFNNST QLLPQEPQRNLQVRLFDRIIDNDINNPLFQLEKLKHTEDSNEFEIKQLEKQLLVQFQRLDTQLTQHHWVCGDSFTLADCA LIPCLSYSFQHLNLLDLDEIVRYWQQAQLRGAWMLVQEEVLLAEMEETAGIRGIP
Sequences:
>Translated_215_residues MELFYHPLSRYSQKVLIALYEKQANFYPRIIDLRDPFSRKEFHQTYPQARVPLLKTHDELLVPESSIIIEYLDRHFNNST QLLPQEPQRNLQVRLFDRIIDNDINNPLFQLEKLKHTEDSNEFEIKQLEKQLLVQFQRLDTQLTQHHWVCGDSFTLADCA LIPCLSYSFQHLNLLDLDEIVRYWQQAQLRGAWMLVQEEVLLAEMEETAGIRGIP >Mature_215_residues MELFYHPLSRYSQKVLIALYEKQANFYPRIIDLRDPFSRKEFHQTYPQARVPLLKTHDELLVPESSIIIEYLDRHFNNST QLLPQEPQRNLQVRLFDRIIDNDINNPLFQLEKLKHTEDSNEFEIKQLEKQLLVQFQRLDTQLTQHHWVCGDSFTLADCA LIPCLSYSFQHLNLLDLDEIVRYWQQAQLRGAWMLVQEEVLLAEMEETAGIRGIP
Specific function: Forms An Equimolar Complex With The RNA Polymerase Holoenzyme (Rnap) But Not With The Core Enzyme. It Is Synthesized Predominantly When Cells Are Exposed To Amino Acid Starvation, At Which Time It Accounts For Over 50% Of The Total Protein Synthesized. It
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25594; Mature: 25594
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFYHPLSRYSQKVLIALYEKQANFYPRIIDLRDPFSRKEFHQTYPQARVPLLKTHDEL CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCHHCCCHHHCCCCC LVPESSIIIEYLDRHFNNSTQLLPQEPQRNLQVRLFDRIIDNDINNPLFQLEKLKHTEDS CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC NEFEIKQLEKQLLVQFQRLDTQLTQHHWVCGDSFTLADCALIPCLSYSFQHLNLLDLDEI CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH VRYWQQAQLRGAWMLVQEEVLLAEMEETAGIRGIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MELFYHPLSRYSQKVLIALYEKQANFYPRIIDLRDPFSRKEFHQTYPQARVPLLKTHDEL CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCHHCCCHHHCCCCC LVPESSIIIEYLDRHFNNSTQLLPQEPQRNLQVRLFDRIIDNDINNPLFQLEKLKHTEDS CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC NEFEIKQLEKQLLVQFQRLDTQLTQHHWVCGDSFTLADCALIPCLSYSFQHLNLLDLDEI CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH VRYWQQAQLRGAWMLVQEEVLLAEMEETAGIRGIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA