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The map label for this gene is yfmM [H]

Identifier: 160877466

GI number: 160877466

Start: 5157697

End: 5159256

Strand: Reverse

Name: yfmM [H]

Synonym: Sbal195_4364

Alternate gene names: 160877466

Gene position: 5159256-5157697 (Counterclockwise)

Preceding gene: 160877467

Following gene: 160877465

Centisome position: 96.48

GC content: 46.47

Gene sequence:

>1560_bases
ATGAGTTTACTCAAAGTTCATAATCTAACTTATCACATTGGTGATAAAACCTTGTACCAGAATGCTGATTTCAATCTCTT
TCCCGCTGAGCATGTTGGGGTAACGGGGAGTAATGGCGTCGGTAAAAGTACCTTACTTAAATTACTGCAAACACAGTTAC
TGCCAGACGGTGGCGATATCATTTGGCAACCCTCTGTGAAAGTGGGGTATCTGGACCAACACGCCCAAATGGATGCCCAG
TTTCGGGTACGTGACTACCTTAAAACCGCCTTTTCTGAGTTGTACTTACTTGAAGCAGAAATGATGGCGATATACGCCTG
CGCCGAAAAAAGCGCAGATGATAGCTACCTTGTGCGCGCCGCTGATATTCAGACTCAGCTCGAGAGCCAGTCATTTTACC
AAGTTGATAACCATATCGACGCGGTCGCAGACGGACTCGGCATTACTCAGTTTGGTATGCACACAAGGCTTGGCGAGTTA
AGTGGTGGGCAGCGTCATAAGGTGATGTTGGCGTCGTTGCTGTTGATGTCACCGGACGTGTTATTACTGGATGAGCCAAC
CAACTATTTAGATAGTGTTCATATTCAATGGTTAGCCGACTACCTTACTGATTTTAATGGTGCCTTTATGGTGGTGTCGC
ACGATCACGCCTTTTTGAATCGTATTGCCACTAGTATTTGCGACATAGATAGACAACAGATCCGCAAATACAAAGGTAAT
ATCGATAAGGCTATGGCGCAAAAAGTTAGCGATGGTGCGGCTCATGCTAAGCAATATCTGGCGCAGAAAAAACACATAGA
TAAACTGGAGCAGTTCATTGCGAAAAATGGCGCTGGTGTCAATGCCAGCATTGCCAATGGTCGTAAAAAACAGCTAACCC
GCATAACGAAGCTCTCCGCGCCGGAATTAGATAAGCCAATATCGATAGCGTTTAAACATACGACCCATAATGCCCAGCAA
GTGCTGAGTGCAACTGACCTGCTAATTGGTTATTCGCGGCCACTGCTCCCCGCCATCGCACTTAGCATTAGCCGCGGCGA
AAAGGTGCTGATCACAGGTTTTAACGGCATAGGTAAATCTACTTTGTTGAAAACCTTGGTGGGTGAGTTGGCGCCAGTTG
CTGGGCAGATAGCAATTTCTACGGGGGTCAAACTTGGCTATTTTGAGCAGGAATTACATTGGCCATATCCAGACGCCACA
GCAGCCAATCTCATTAAATCTGCATGTGGTGGGCTCGATGATAAAGCGGTCAGACAACAATTAGCCCAGTTTGGGGTGTC
AGGAAAACTCGCTATGCAGCCTATTCGTACCCTTAGTGGCGGTGAGCAAACGAAGGTTAAGCTTTGCCGATTGGCACAAA
ATCCGACTAACTTGTTAGTCCTGGATGAGCCTACAACACATTTAGATGTCACTGTAAAAGCAGCACTTAAGCAGGCCTTG
ATTGAATACTCCGGGACTATCATTGTGGTGTCTCATGAGCGTAGTTTTGTCGCCGACTGGCCAGACAGAATTGTGGACAT
TCAAGCCATTATCACCGCACAAGATGCTGAAACTATTTAG

Upstream 100 bases:

>100_bases
TTTTGTTTCTGATAAAAATCAGAAGCAAAGTTTCAATGTTTCTTGAAACGAGGGGCCGGTATATCAACTGCCGCCCCTCG
TTTTTTTTGGATGTAATACA

Downstream 100 bases:

>100_bases
GTTATCAAACCATGTTATTAAAAGTTTTATTATTTTTCATTGCTTTTTTAGTCGGTGCAGATGAGCTGATGCTAGGGCCA
ATCTTAGTACCTATTGGTTA

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MSLLKVHNLTYHIGDKTLYQNADFNLFPAEHVGVTGSNGVGKSTLLKLLQTQLLPDGGDIIWQPSVKVGYLDQHAQMDAQ
FRVRDYLKTAFSELYLLEAEMMAIYACAEKSADDSYLVRAADIQTQLESQSFYQVDNHIDAVADGLGITQFGMHTRLGEL
SGGQRHKVMLASLLLMSPDVLLLDEPTNYLDSVHIQWLADYLTDFNGAFMVVSHDHAFLNRIATSICDIDRQQIRKYKGN
IDKAMAQKVSDGAAHAKQYLAQKKHIDKLEQFIAKNGAGVNASIANGRKKQLTRITKLSAPELDKPISIAFKHTTHNAQQ
VLSATDLLIGYSRPLLPAIALSISRGEKVLITGFNGIGKSTLLKTLVGELAPVAGQIAISTGVKLGYFEQELHWPYPDAT
AANLIKSACGGLDDKAVRQQLAQFGVSGKLAMQPIRTLSGGEQTKVKLCRLAQNPTNLLVLDEPTTHLDVTVKAALKQAL
IEYSGTIIVVSHERSFVADWPDRIVDIQAIITAQDAETI

Sequences:

>Translated_519_residues
MSLLKVHNLTYHIGDKTLYQNADFNLFPAEHVGVTGSNGVGKSTLLKLLQTQLLPDGGDIIWQPSVKVGYLDQHAQMDAQ
FRVRDYLKTAFSELYLLEAEMMAIYACAEKSADDSYLVRAADIQTQLESQSFYQVDNHIDAVADGLGITQFGMHTRLGEL
SGGQRHKVMLASLLLMSPDVLLLDEPTNYLDSVHIQWLADYLTDFNGAFMVVSHDHAFLNRIATSICDIDRQQIRKYKGN
IDKAMAQKVSDGAAHAKQYLAQKKHIDKLEQFIAKNGAGVNASIANGRKKQLTRITKLSAPELDKPISIAFKHTTHNAQQ
VLSATDLLIGYSRPLLPAIALSISRGEKVLITGFNGIGKSTLLKTLVGELAPVAGQIAISTGVKLGYFEQELHWPYPDAT
AANLIKSACGGLDDKAVRQQLAQFGVSGKLAMQPIRTLSGGEQTKVKLCRLAQNPTNLLVLDEPTTHLDVTVKAALKQAL
IEYSGTIIVVSHERSFVADWPDRIVDIQAIITAQDAETI
>Mature_518_residues
SLLKVHNLTYHIGDKTLYQNADFNLFPAEHVGVTGSNGVGKSTLLKLLQTQLLPDGGDIIWQPSVKVGYLDQHAQMDAQF
RVRDYLKTAFSELYLLEAEMMAIYACAEKSADDSYLVRAADIQTQLESQSFYQVDNHIDAVADGLGITQFGMHTRLGELS
GGQRHKVMLASLLLMSPDVLLLDEPTNYLDSVHIQWLADYLTDFNGAFMVVSHDHAFLNRIATSICDIDRQQIRKYKGNI
DKAMAQKVSDGAAHAKQYLAQKKHIDKLEQFIAKNGAGVNASIANGRKKQLTRITKLSAPELDKPISIAFKHTTHNAQQV
LSATDLLIGYSRPLLPAIALSISRGEKVLITGFNGIGKSTLLKTLVGELAPVAGQIAISTGVKLGYFEQELHWPYPDATA
ANLIKSACGGLDDKAVRQQLAQFGVSGKLAMQPIRTLSGGEQTKVKLCRLAQNPTNLLVLDEPTTHLDVTVKAALKQALI
EYSGTIIVVSHERSFVADWPDRIVDIQAIITAQDAETI

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=500, Percent_Identity=31.2, Blast_Score=235, Evalue=9e-62,
Organism=Homo sapiens, GI10947137, Length=530, Percent_Identity=28.4905660377358, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI27881506, Length=530, Percent_Identity=28.4905660377358, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI10947135, Length=525, Percent_Identity=28, Blast_Score=167, Evalue=3e-41,
Organism=Homo sapiens, GI69354671, Length=525, Percent_Identity=28, Blast_Score=166, Evalue=3e-41,
Organism=Escherichia coli, GI1787041, Length=516, Percent_Identity=32.5581395348837, Blast_Score=263, Evalue=1e-71,
Organism=Escherichia coli, GI1789751, Length=494, Percent_Identity=32.3886639676113, Blast_Score=254, Evalue=7e-69,
Organism=Escherichia coli, GI2367384, Length=508, Percent_Identity=31.1023622047244, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI1787182, Length=522, Percent_Identity=31.0344827586207, Blast_Score=234, Evalue=1e-62,
Organism=Escherichia coli, GI1786975, Length=530, Percent_Identity=24.5283018867925, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1788165, Length=177, Percent_Identity=30.5084745762712, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1787758, Length=180, Percent_Identity=28.3333333333333, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787029, Length=201, Percent_Identity=28.3582089552239, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=517, Percent_Identity=27.2727272727273, Blast_Score=201, Evalue=7e-52,
Organism=Caenorhabditis elegans, GI17553372, Length=509, Percent_Identity=29.4695481335953, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI17555318, Length=522, Percent_Identity=25.2873563218391, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17532409, Length=179, Percent_Identity=29.608938547486, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6321121, Length=520, Percent_Identity=29.4230769230769, Blast_Score=216, Evalue=8e-57,
Organism=Saccharomyces cerevisiae, GI6320874, Length=509, Percent_Identity=29.0766208251473, Blast_Score=192, Evalue=9e-50,
Organism=Saccharomyces cerevisiae, GI6325030, Length=383, Percent_Identity=27.6762402088773, Blast_Score=120, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6323278, Length=382, Percent_Identity=25.9162303664921, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=379, Percent_Identity=24.802110817942, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24666836, Length=502, Percent_Identity=30.8764940239044, Blast_Score=236, Evalue=4e-62,
Organism=Drosophila melanogaster, GI24641342, Length=516, Percent_Identity=26.937984496124, Blast_Score=182, Evalue=5e-46,
Organism=Drosophila melanogaster, GI24642252, Length=508, Percent_Identity=26.3779527559055, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI18859989, Length=508, Percent_Identity=26.3779527559055, Blast_Score=177, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 56884; Mature: 56753

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLKVHNLTYHIGDKTLYQNADFNLFPAEHVGVTGSNGVGKSTLLKLLQTQLLPDGGDI
CCCEEEECEEEEECCCEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCE
IWQPSVKVGYLDQHAQMDAQFRVRDYLKTAFSELYLLEAEMMAIYACAEKSADDSYLVRA
EECCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
ADIQTQLESQSFYQVDNHIDAVADGLGITQFGMHTRLGELSGGQRHKVMLASLLLMSPDV
HHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCE
LLLDEPTNYLDSVHIQWLADYLTDFNGAFMVVSHDHAFLNRIATSICDIDRQQIRKYKGN
EEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHCC
IDKAMAQKVSDGAAHAKQYLAQKKHIDKLEQFIAKNGAGVNASIANGRKKQLTRITKLSA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCCC
PELDKPISIAFKHTTHNAQQVLSATDLLIGYSRPLLPAIALSISRGEKVLITGFNGIGKS
CCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCHH
TLLKTLVGELAPVAGQIAISTGVKLGYFEQELHWPYPDATAANLIKSACGGLDDKAVRQQ
HHHHHHHHHHCCCCCEEEEECCCEEEEEHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
LAQFGVSGKLAMQPIRTLSGGEQTKVKLCRLAQNPTNLLVLDEPTTHLDVTVKAALKQAL
HHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCCCCEEEHHHHHHHHHH
IEYSGTIIVVSHERSFVADWPDRIVDIQAIITAQDAETI
HHHCCEEEEEECCCCCCCCCCHHHEEEEEEEEECCCCCC
>Mature Secondary Structure 
SLLKVHNLTYHIGDKTLYQNADFNLFPAEHVGVTGSNGVGKSTLLKLLQTQLLPDGGDI
CCEEEECEEEEECCCEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCE
IWQPSVKVGYLDQHAQMDAQFRVRDYLKTAFSELYLLEAEMMAIYACAEKSADDSYLVRA
EECCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
ADIQTQLESQSFYQVDNHIDAVADGLGITQFGMHTRLGELSGGQRHKVMLASLLLMSPDV
HHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCE
LLLDEPTNYLDSVHIQWLADYLTDFNGAFMVVSHDHAFLNRIATSICDIDRQQIRKYKGN
EEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHCC
IDKAMAQKVSDGAAHAKQYLAQKKHIDKLEQFIAKNGAGVNASIANGRKKQLTRITKLSA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCCC
PELDKPISIAFKHTTHNAQQVLSATDLLIGYSRPLLPAIALSISRGEKVLITGFNGIGKS
CCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCHH
TLLKTLVGELAPVAGQIAISTGVKLGYFEQELHWPYPDATAANLIKSACGGLDDKAVRQQ
HHHHHHHHHHCCCCCEEEEECCCEEEEEHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
LAQFGVSGKLAMQPIRTLSGGEQTKVKLCRLAQNPTNLLVLDEPTTHLDVTVKAALKQAL
HHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCCCCEEEHHHHHHHHHH
IEYSGTIIVVSHERSFVADWPDRIVDIQAIITAQDAETI
HHHCCEEEEEECCCCCCCCCCHHHEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]