| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877467
Identifier: 160877467
GI number: 160877467
Start: 5159919
End: 5160662
Strand: Reverse
Name: 160877467
Synonym: Sbal195_4365
Alternate gene names: NA
Gene position: 5160662-5159919 (Counterclockwise)
Preceding gene: 160877477
Following gene: 160877466
Centisome position: 96.51
GC content: 38.84
Gene sequence:
>744_bases ATGAGTAAGTTTCTGCTGTTCCTGATTTTAACTATGAGTGCCTTTGTTTCGGCTGCAAACCAAGATGTTCTTATCGGTAG CGGAGAATGGTCTCCGTATGCTGGCGCTAAATTGAAAGGATTGGGTTTTTTAAACGATGTGGTCACAATCGCTTTTGAGC AGGAAGGAATTACCGCAAAATTCGAGTTCAAACCTTGGGCTCGTATTGAAGTCGAAACCGGTAATGGGTATTTTCTCGCG TCACCCGGTTGGTCCATTCAAGAAGATCGTAAAGCCCAATATCTGTTCAGTAAGAAACCGATAATCGTTTCTCGCAGCGT ATTTATTGAACGAATTGATAGTCAGTTTGATTGGAAGATCATGAGTGATCTTAAACAATTTACTATCGGGAGCAACCGAG CCGATTACTATGTTAAAGCATTGACTGAGATAGGAGTTAAAGTTCAAGAGTTAAACGAATACCCACAGGGAATCAAGATG CTACTTGCTAAACGTTTTGACGCGTTCATTGTAAATGAAGCCGTGGGGCTGAAACTGATACGCGATTTATCTGCTGAAGA ACAAGCTAAAATTCAAATTCACCCTTTAGCGTATGATGAAAATTTCTCCTTCCTCATGTTTTCTAAAAATTACCCTAATG TCGAAGCTTTTGTAGAAAAGTATGATTCTGGCTTTGAAAAAATACAGAAATCGGGGCTATATCAAACAATGGTTCAAGAT TTATATAAAGGTAAATATGATTGA
Upstream 100 bases:
>100_bases TTAATTGATATAAAAACATCTTGTTAGGGTTAGCTTGCTGGTGGTTTGACTTAGTTTCTAAGTGAATAAAAAGAAAGTTG GAATATTTTAGGAGAAATTG
Downstream 100 bases:
>100_bases TTAGATTGGTATTTTCGTAAAATCCATCAAGGAATATAGGGTAGAGTAGTTCATTGAGCCTATTTGCTAATGTTACTTTG ATAATTGTTGTATTTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Amino Acid ABC Transporter
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSKFLLFLILTMSAFVSAANQDVLIGSGEWSPYAGAKLKGLGFLNDVVTIAFEQEGITAKFEFKPWARIEVETGNGYFLA SPGWSIQEDRKAQYLFSKKPIIVSRSVFIERIDSQFDWKIMSDLKQFTIGSNRADYYVKALTEIGVKVQELNEYPQGIKM LLAKRFDAFIVNEAVGLKLIRDLSAEEQAKIQIHPLAYDENFSFLMFSKNYPNVEAFVEKYDSGFEKIQKSGLYQTMVQD LYKGKYD
Sequences:
>Translated_247_residues MSKFLLFLILTMSAFVSAANQDVLIGSGEWSPYAGAKLKGLGFLNDVVTIAFEQEGITAKFEFKPWARIEVETGNGYFLA SPGWSIQEDRKAQYLFSKKPIIVSRSVFIERIDSQFDWKIMSDLKQFTIGSNRADYYVKALTEIGVKVQELNEYPQGIKM LLAKRFDAFIVNEAVGLKLIRDLSAEEQAKIQIHPLAYDENFSFLMFSKNYPNVEAFVEKYDSGFEKIQKSGLYQTMVQD LYKGKYD >Mature_246_residues SKFLLFLILTMSAFVSAANQDVLIGSGEWSPYAGAKLKGLGFLNDVVTIAFEQEGITAKFEFKPWARIEVETGNGYFLAS PGWSIQEDRKAQYLFSKKPIIVSRSVFIERIDSQFDWKIMSDLKQFTIGSNRADYYVKALTEIGVKVQELNEYPQGIKML LAKRFDAFIVNEAVGLKLIRDLSAEEQAKIQIHPLAYDENFSFLMFSKNYPNVEAFVEKYDSGFEKIQKSGLYQTMVQDL YKGKYD
Specific function: Unknown
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28213; Mature: 28082
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFLLFLILTMSAFVSAANQDVLIGSGEWSPYAGAKLKGLGFLNDVVTIAFEQEGITAK CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEECCCCHHHHHEEEEEECCCCEEE FEFKPWARIEVETGNGYFLASPGWSIQEDRKAQYLFSKKPIIVSRSVFIERIDSQFDWKI EECCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHCCCCEEEEHHHHHHHHCCCCCHHH MSDLKQFTIGSNRADYYVKALTEIGVKVQELNEYPQGIKMLLAKRFDAFIVNEAVGLKLI HHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH RDLSAEEQAKIQIHPLAYDENFSFLMFSKNYPNVEAFVEKYDSGFEKIQKSGLYQTMVQD HHCCCCCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH LYKGKYD HHCCCCC >Mature Secondary Structure SKFLLFLILTMSAFVSAANQDVLIGSGEWSPYAGAKLKGLGFLNDVVTIAFEQEGITAK CHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEECCCCHHHHHEEEEEECCCCEEE FEFKPWARIEVETGNGYFLASPGWSIQEDRKAQYLFSKKPIIVSRSVFIERIDSQFDWKI EECCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHCCCCEEEEHHHHHHHHCCCCCHHH MSDLKQFTIGSNRADYYVKALTEIGVKVQELNEYPQGIKMLLAKRFDAFIVNEAVGLKLI HHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH RDLSAEEQAKIQIHPLAYDENFSFLMFSKNYPNVEAFVEKYDSGFEKIQKSGLYQTMVQD HHCCCCCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH LYKGKYD HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA