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The map label for this gene is ymfD [H]

Identifier: 160877465

GI number: 160877465

Start: 5156531

End: 5157685

Strand: Reverse

Name: ymfD [H]

Synonym: Sbal195_4363

Alternate gene names: 160877465

Gene position: 5157685-5156531 (Counterclockwise)

Preceding gene: 160877466

Following gene: 160877464

Centisome position: 96.45

GC content: 51.0

Gene sequence:

>1155_bases
ATGTTATTAAAAGTTTTATTATTTTTCATTGCTTTTTTAGTCGGTGCAGATGAGCTGATGCTAGGGCCAATCTTAGTACC
TATTGGTTATGATTTAGGAGTTCAACCTGAACGCGTGACCTTATTCATTACCGCCTATAGCGTGGCGCTGGCGATAGTGG
CACCAGCACTGGGCGTGTTATCTGACCGCCTTGGACGTATGCGAGTGATGTTACCTGCAGCCTTACTGTTTGGCGCGGCT
TCCATCGCAACCGGATTGGTTAGCTCATTTGAGTGGGGGCTGACGACACGGATACTGACGGGTATTGCTAGTGCAGGCAT
GTTACCGATTGCTTTTGCGATGGCCGCAGATGCTTCAACTAACGCTAGTAATGATGCGATGACGCGTATCGCATGGGTTC
AATCAGGGCTGACGCTTGGTATGATCTCTAGCCCAGCGCTTGGGGCATTGTTGGCTGAATGGCTCTCTTGGCGCGCCGCG
TTTATGGTACTTGGCGTGTGTGCTTGGTGTGTGGCTGGCGCGCTCGCCGTGGTTTTCGTTCGCAGTAAAACTGTTGAAGC
TCCCGCTATCCATGATGGCGATGAAAAGGTCACTAAAATCTGGGCTATTCCGGGTGCTACTGGCGCCTTGCTGGCGATGT
TTTTCGGCCTTGGCGGAGGCATCGGGTTATTCAATTTAATTGGGCAGCATTTACGCGACACGTTAGGCATGAGTATTTGG
TCCGTGGGTGTTATGTATGCTGTGTTAGGGGGGAGTAGCGTTATCGGCAATATGTTAATGCCGCGCGTGGCGGGCCGACT
TGAAAGCGGCCGCCAAGTTATGCGACTGGCGTTAATTGTGTGCCTTATTGTCAGCATTGGATTTTATCTGTATCCCGCGC
AGCAACTATTAGTGCTGATATTACCGTTAGTCATGTGGTCGCTAGCGGGTGGCGTCGGTTCGCCAGCATTACAGAGTTAT
ATTGCGCAACTATCTAACGCGCATCGCGGCATACTGATGTCGCTCGCCATGACTATGATGCACCTCGGGGTGGCTATCTG
GTCTGGCGTAGCGGGATTTGCTTATAGTGTTGGACCAATAGGTATGGCCATTCTTGCTACTTTGTTATTTGGTGCCGCCA
TCGCTGTGTTACGCCCTGTGAAACAGGCTCAATAG

Upstream 100 bases:

>100_bases
CTCATGAGCGTAGTTTTGTCGCCGACTGGCCAGACAGAATTGTGGACATTCAAGCCATTATCACCGCACAAGATGCTGAA
ACTATTTAGGTTATCAAACC

Downstream 100 bases:

>100_bases
CCGCGAATAAAAAGACGCACTAATTTTTATCATGGTTTACAACCGATTGATTATGGATAGTTTAAAAATGAAACAAGTAC
ACTTTGAAAATCCTGATGTA

Product: major facilitator transporter

Products: Proton [Cytoplasm]; drug [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MLLKVLLFFIAFLVGADELMLGPILVPIGYDLGVQPERVTLFITAYSVALAIVAPALGVLSDRLGRMRVMLPAALLFGAA
SIATGLVSSFEWGLTTRILTGIASAGMLPIAFAMAADASTNASNDAMTRIAWVQSGLTLGMISSPALGALLAEWLSWRAA
FMVLGVCAWCVAGALAVVFVRSKTVEAPAIHDGDEKVTKIWAIPGATGALLAMFFGLGGGIGLFNLIGQHLRDTLGMSIW
SVGVMYAVLGGSSVIGNMLMPRVAGRLESGRQVMRLALIVCLIVSIGFYLYPAQQLLVLILPLVMWSLAGGVGSPALQSY
IAQLSNAHRGILMSLAMTMMHLGVAIWSGVAGFAYSVGPIGMAILATLLFGAAIAVLRPVKQAQ

Sequences:

>Translated_384_residues
MLLKVLLFFIAFLVGADELMLGPILVPIGYDLGVQPERVTLFITAYSVALAIVAPALGVLSDRLGRMRVMLPAALLFGAA
SIATGLVSSFEWGLTTRILTGIASAGMLPIAFAMAADASTNASNDAMTRIAWVQSGLTLGMISSPALGALLAEWLSWRAA
FMVLGVCAWCVAGALAVVFVRSKTVEAPAIHDGDEKVTKIWAIPGATGALLAMFFGLGGGIGLFNLIGQHLRDTLGMSIW
SVGVMYAVLGGSSVIGNMLMPRVAGRLESGRQVMRLALIVCLIVSIGFYLYPAQQLLVLILPLVMWSLAGGVGSPALQSY
IAQLSNAHRGILMSLAMTMMHLGVAIWSGVAGFAYSVGPIGMAILATLLFGAAIAVLRPVKQAQ
>Mature_384_residues
MLLKVLLFFIAFLVGADELMLGPILVPIGYDLGVQPERVTLFITAYSVALAIVAPALGVLSDRLGRMRVMLPAALLFGAA
SIATGLVSSFEWGLTTRILTGIASAGMLPIAFAMAADASTNASNDAMTRIAWVQSGLTLGMISSPALGALLAEWLSWRAA
FMVLGVCAWCVAGALAVVFVRSKTVEAPAIHDGDEKVTKIWAIPGATGALLAMFFGLGGGIGLFNLIGQHLRDTLGMSIW
SVGVMYAVLGGSSVIGNMLMPRVAGRLESGRQVMRLALIVCLIVSIGFYLYPAQQLLVLILPLVMWSLAGGVGSPALQSY
IAQLSNAHRGILMSLAMTMMHLGVAIWSGVAGFAYSVGPIGMAILATLLFGAAIAVLRPVKQAQ

Specific function: Involved in secretion of bacillibactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40119; Mature: 40119

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKVLLFFIAFLVGADELMLGPILVPIGYDLGVQPERVTLFITAYSVALAIVAPALGVL
CHHHHHHHHHHHHHCCCHHHHCCCCEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
SDRLGRMRVMLPAALLFGAASIATGLVSSFEWGLTTRILTGIASAGMLPIAFAMAADAST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
NASNDAMTRIAWVQSGLTLGMISSPALGALLAEWLSWRAAFMVLGVCAWCVAGALAVVFV
CCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSKTVEAPAIHDGDEKVTKIWAIPGATGALLAMFFGLGGGIGLFNLIGQHLRDTLGMSIW
HHCCCCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SVGVMYAVLGGSSVIGNMLMPRVAGRLESGRQVMRLALIVCLIVSIGFYLYPAQQLLVLI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPLVMWSLAGGVGSPALQSYIAQLSNAHRGILMSLAMTMMHLGVAIWSGVAGFAYSVGPI
HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMAILATLLFGAAIAVLRPVKQAQ
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLKVLLFFIAFLVGADELMLGPILVPIGYDLGVQPERVTLFITAYSVALAIVAPALGVL
CHHHHHHHHHHHHHCCCHHHHCCCCEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
SDRLGRMRVMLPAALLFGAASIATGLVSSFEWGLTTRILTGIASAGMLPIAFAMAADAST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
NASNDAMTRIAWVQSGLTLGMISSPALGALLAEWLSWRAAFMVLGVCAWCVAGALAVVFV
CCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSKTVEAPAIHDGDEKVTKIWAIPGATGALLAMFFGLGGGIGLFNLIGQHLRDTLGMSIW
HHCCCCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SVGVMYAVLGGSSVIGNMLMPRVAGRLESGRQVMRLALIVCLIVSIGFYLYPAQQLLVLI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPLVMWSLAGGVGSPALQSYIAQLSNAHRGILMSLAMTMMHLGVAIWSGVAGFAYSVGPI
HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMAILATLLFGAAIAVLRPVKQAQ
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]