| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is menC [H]
Identifier: 160877392
GI number: 160877392
Start: 5070309
End: 5071409
Strand: Direct
Name: menC [H]
Synonym: Sbal195_4290
Alternate gene names: 160877392
Gene position: 5070309-5071409 (Clockwise)
Preceding gene: 160877391
Following gene: 160877393
Centisome position: 94.82
GC content: 48.41
Gene sequence:
>1101_bases ATGATCTTAACTTCGCTTAACCTGTATCAATATCGACTACCGCTCGATGTATTATTGCCCGTAGGCAAGCAACGCATCGA CCACAGGGCTGGATTAGTATTGCAAGCCTGCGCCAGCGCTAATGTTGGTGGCGAATACAGACAAGTCGAAGTTGAAATCG CCCCACTCTCTGGCATAGATATCGATGAACAAGTCTTAGTGGGATTTAGCCGCGAAACACTGGCTCAAGTGCAAACGGCG TTAACTGAGTTATTACCCCTACTCTGCGGTCTGCATATCGATACCCTGCTGGATTACGCCGAGCAAAGTCCTTACCCTTC CTTGGCCTTTGGTTTAAGTCTGTTGCATGCCAAGTTAATGGGTAAGCTCGATGCTATCCGCCCACAAACCGCCACAGTCC CTTTGATTTATCATCCAACGGATGCGGGCAAAGACTTGCTCGATAACAAAGTTGCGGCGCTCGGCATGCATGTTCATTCG GTGAAAGTTAAAGTCGCGCAGACCTCAATCGAAGACGAACTGAGCCTGATTTATGGCATTTTACGCACCCGCCCTGATCT CAAGCTACGTTTAGACGCAAACCGAGGGTTTACACTGGAACAAGCGATCGAATTCGCTGCTTGCCTACCCCTGGACACCA TCGAATACATAGAGGAACCTTGCCAGAATCCACAGGATAATCTGGCATTTTATCAAGCAATTGGTATGCCTTACGCCCTC GATGAATCACTCAACGATCCCGATTATCAGTTTGCGATGCAAAATGGCCTGACTGCGCTCATCATCAAACCTATGCTGCT CGGCAGTATTGAAAAGCTAGCTAACTTAATCGATACGGCGCAAAGCTATGGTGTGCGTTGCATTATCAGTTCAAGTCTTG AAAGCAGTTTAGGCATTAGCGATCTGGCCCATTTAGCCGCGATTCTCACGCCCGATGAAATCCCAGGACTCGATACCCTC AGCGCCTTTAGCCAAGATTTAATCGTGTCATCGGGTAAAAAACACTGCCTCACACTCGCCCAACTTGAACTCATTGCACA ACACGCCATTGATTCAACGCAGCAAAGTGATTTGGGTGCAGCCAAGCGTGAGGAAAACTAG
Upstream 100 bases:
>100_bases CGGCGCCGGACACAACATACACCAAGCAGCTCCCGAGGCATTAATCGCAACAATAGTTAAGCTGCTAGGGTAAACAACAC AATTAAAATGTAGGAAATAT
Downstream 100 bases:
>100_bases TTTGTCTGACACCCGCCTATCGCAGTCGCTAGCACTGTCCCCCGTGCACCAAGCCGCGCTGGCGTTTCCACAGCAGACGG CCAGCAAGTTGGCGGGACAA
Product: O-succinylbenzoate synthase
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MILTSLNLYQYRLPLDVLLPVGKQRIDHRAGLVLQACASANVGGEYRQVEVEIAPLSGIDIDEQVLVGFSRETLAQVQTA LTELLPLLCGLHIDTLLDYAEQSPYPSLAFGLSLLHAKLMGKLDAIRPQTATVPLIYHPTDAGKDLLDNKVAALGMHVHS VKVKVAQTSIEDELSLIYGILRTRPDLKLRLDANRGFTLEQAIEFAACLPLDTIEYIEEPCQNPQDNLAFYQAIGMPYAL DESLNDPDYQFAMQNGLTALIIKPMLLGSIEKLANLIDTAQSYGVRCIISSSLESSLGISDLAHLAAILTPDEIPGLDTL SAFSQDLIVSSGKKHCLTLAQLELIAQHAIDSTQQSDLGAAKREEN
Sequences:
>Translated_366_residues MILTSLNLYQYRLPLDVLLPVGKQRIDHRAGLVLQACASANVGGEYRQVEVEIAPLSGIDIDEQVLVGFSRETLAQVQTA LTELLPLLCGLHIDTLLDYAEQSPYPSLAFGLSLLHAKLMGKLDAIRPQTATVPLIYHPTDAGKDLLDNKVAALGMHVHS VKVKVAQTSIEDELSLIYGILRTRPDLKLRLDANRGFTLEQAIEFAACLPLDTIEYIEEPCQNPQDNLAFYQAIGMPYAL DESLNDPDYQFAMQNGLTALIIKPMLLGSIEKLANLIDTAQSYGVRCIISSSLESSLGISDLAHLAAILTPDEIPGLDTL SAFSQDLIVSSGKKHCLTLAQLELIAQHAIDSTQQSDLGAAKREEN >Mature_366_residues MILTSLNLYQYRLPLDVLLPVGKQRIDHRAGLVLQACASANVGGEYRQVEVEIAPLSGIDIDEQVLVGFSRETLAQVQTA LTELLPLLCGLHIDTLLDYAEQSPYPSLAFGLSLLHAKLMGKLDAIRPQTATVPLIYHPTDAGKDLLDNKVAALGMHVHS VKVKVAQTSIEDELSLIYGILRTRPDLKLRLDANRGFTLEQAIEFAACLPLDTIEYIEEPCQNPQDNLAFYQAIGMPYAL DESLNDPDYQFAMQNGLTALIIKPMLLGSIEKLANLIDTAQSYGVRCIISSSLESSLGISDLAHLAAILTPDEIPGLDTL SAFSQDLIVSSGKKHCLTLAQLELIAQHAIDSTQQSDLGAAKREEN
Specific function: Converts SHCHC to OSB [H]
COG id: COG1441
COG function: function code H; O-succinylbenzoate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788596, Length=324, Percent_Identity=35.8024691358025, Blast_Score=159, Evalue=4e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR010196 [H]
Pfam domain/function: PF01188 MR_MLE [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 39881; Mature: 39881
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00909 MR_MLE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTSLNLYQYRLPLDVLLPVGKQRIDHRAGLVLQACASANVGGEYRQVEVEIAPLSGID CEEECCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCC IDEQVLVGFSRETLAQVQTALTELLPLLCGLHIDTLLDYAEQSPYPSLAFGLSLLHAKLM CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GKLDAIRPQTATVPLIYHPTDAGKDLLDNKVAALGMHVHSVKVKVAQTSIEDELSLIYGI HHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHH LRTRPDLKLRLDANRGFTLEQAIEFAACLPLDTIEYIEEPCQNPQDNLAFYQAIGMPYAL HHCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEC DESLNDPDYQFAMQNGLTALIIKPMLLGSIEKLANLIDTAQSYGVRCIISSSLESSLGIS CCCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHCCHH DLAHLAAILTPDEIPGLDTLSAFSQDLIVSSGKKHCLTLAQLELIAQHAIDSTQQSDLGA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCC AKREEN CCCCCC >Mature Secondary Structure MILTSLNLYQYRLPLDVLLPVGKQRIDHRAGLVLQACASANVGGEYRQVEVEIAPLSGID CEEECCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCC IDEQVLVGFSRETLAQVQTALTELLPLLCGLHIDTLLDYAEQSPYPSLAFGLSLLHAKLM CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GKLDAIRPQTATVPLIYHPTDAGKDLLDNKVAALGMHVHSVKVKVAQTSIEDELSLIYGI HHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHH LRTRPDLKLRLDANRGFTLEQAIEFAACLPLDTIEYIEEPCQNPQDNLAFYQAIGMPYAL HHCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEC DESLNDPDYQFAMQNGLTALIIKPMLLGSIEKLANLIDTAQSYGVRCIISSSLESSLGIS CCCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHCCHH DLAHLAAILTPDEIPGLDTLSAFSQDLIVSSGKKHCLTLAQLELIAQHAIDSTQQSDLGA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCC AKREEN CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]