| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yuxL [H]
Identifier: 160877356
GI number: 160877356
Start: 5033233
End: 5035329
Strand: Direct
Name: yuxL [H]
Synonym: Sbal195_4254
Alternate gene names: 160877356
Gene position: 5033233-5035329 (Clockwise)
Preceding gene: 160877354
Following gene: 160877364
Centisome position: 94.13
GC content: 48.12
Gene sequence:
>2097_bases ATGCTAACTTGCCACTTAGCAAAAATACGCAACATCATAATCCTAGTAACTGTTTGTATCACAAGGAGACTCATAGTGAA GAAGACAGGCATTTTATTACTCTGTTTACTGCTGCCCTTTAGCTCGGCATTTGCAGAACAGGGCAAACCACTCTCAGCGG AATTACTTTGGCAACTCAAACGTATCGGTAGCCCGATTGTATCCCCCACGGGTGAACACATTATCGCGCCAGTCACAGAG TACGATCTCAAAGCTGATAAAGGCTCGACCCAGCTGTGGCGTTTCGATGGCAAGCATAACCGAGCCATCACAGCCAAAGG TTTAAGGGTGAGCGAGCCCGTGTTTTCCCCCGACGGCAAATTCTTGGCATTTGTGAGTCAGCGCAATGAAGACGAGGCGA GCCAAATTTACCTGCTGCCGATGGACGGTCCGGGTGAAGCGCAGCGCTTAACCGATATTCCCACAGGCGTTAACAGTATT AAGTGGGTTGGCAAGCATCTGTATTTCATCAGCAATATCTTCCCTAATCAAAGCTGGGAAGAAATGAAAACCCAGCTCAC CACAGATACAGACAATAAGGTTTCCGCCCATCAATGGAACGCCTTGCCCTATTCCCAATTTGATCACTGGTTAGATGAAC GTCGTCAAGCCCACGTATTTAGAATTCCGGCCAAAGGCGGTAATGTCGAAAACATCACCCAGCCTGCGGGCCATGAATTA CCACGATCAGATCAAAGCAGTGCAAGCTATGATGTTTCCCCCAATGAACGCTGGATCGCCTTCAATGTCTATGGCTCAGA GAATAAAGTCGATCCTAAAATTGATATATTTCTCGCCACAATTGGAGGCAACAAGGCCGAAAATCTCACCGCAGATAATC AAGCGCCGGATCTGAATCCGAGCTTTAGCCCTAACGGTAAAACGCTCGCCTTTACCCGCCAAAAAATCCCCGGTTTCTAC GCCGATACCTCAAGGCTGATGCTGCTGGATATCGACAGCCGTAAACTCACAACACTCACATCTGACTGGGACCGTTCTGT CTCTCAATTCAGTTGGACACCCGACAACAAGGGCTTTTATGCCACTGTGGAGGACGCAGCCACAAACCGTATTTACTCTA TCGATGCCAAGAACGGCAAAGTAAAAGCCATCACAGAGGCAACCGATTTTAGCCAACCCGCCATAGGCAAAGATGGCGAA CTGATTGCCACCAATCAGAGCTTTTTGTATCCCGCTCGCTTGGTCAGCATCAATCCTCGCAATGGTAAGATTGAACGCCT AGAAAACTTTAACGACGATATTCTCAAAGATGTCGACCTAGGTACCTATGAATCAGTTACCTACAAAGGCTATCAAGGTA AAGATATTCAAATGTGGGTTCACTATCCCGCAGGGTTTGATCGCAGCAAAAAATACCCACTGTTTATGCTCGTCCACGGC GGGCCACACAATGCCATTACCGACGGTTTCCATTTCCGTTGGAACGCGCAAACCTTTGCTTCTTGGGGTTATGTCACGGC GTGGCCAAACTTCCACGGTTCGAGTGGCTTTGGTCAGGAATTTGCCGATTCCATCAATCCCGATTGGAAGACAAAACCCC TTGAGGATGTGCTCAAGGCGGCAGACTGGTTTAAACAACAAAGCTGGATAGACAGTGATCGCATGGTGGCGGGTGGTGCA AGTTATGGTGGTTACCTGACCTCGATTATTTTGGGTCAGCCGCATCCCTTTAAAGCGCTATTGATCCATGCTGCGGTTTA CGACATGTATGCACAAATGGCGTCGGACTTTGCCGTACACAGTACCCGATTTGGCTACTATTGGGATAATCCAGAACTGT ATAAAGCCATTTCGCCCCATTACTTTGCGGCTAACTTCAACACTCCAACCTTAGTCAGCCATGGTCAACTCGATTACTTA GTGCCGGCGACCCAAGGGTTCGAACTGTTCCACACCCTGCAAAGTCGACATGTTGAATCGCGGATGATTTATTTCCCCGA TGAAAATCACTGGATTATGAAGCCTAATAACTCAGTCTACTGGTATAACGAAGTGAAGAAGTGGATGACCCACTTTGCCG AACCTGGCGCGCGTTAA
Upstream 100 bases:
>100_bases CTGACAGTTTACCGCCTACACCCGCCGCTTTTGAGCTGAGATACCCAACAAAGATTCACAGTTGCTTACATAACAGCTTA TTCAGGCATAGCGGGTTTTC
Downstream 100 bases:
>100_bases ACGCCATCCATAAGAGACAAAAAAGGTCTGCAATGCAGACCTTTTTAATGGGTTTACTTAAACTAAAGCGTAGGCTAACG CCTTAGTTTGAAATGACTTA
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 698; Mature: 698
Protein sequence:
>698_residues MLTCHLAKIRNIIILVTVCITRRLIVKKTGILLLCLLLPFSSAFAEQGKPLSAELLWQLKRIGSPIVSPTGEHIIAPVTE YDLKADKGSTQLWRFDGKHNRAITAKGLRVSEPVFSPDGKFLAFVSQRNEDEASQIYLLPMDGPGEAQRLTDIPTGVNSI KWVGKHLYFISNIFPNQSWEEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHEL PRSDQSSASYDVSPNERWIAFNVYGSENKVDPKIDIFLATIGGNKAENLTADNQAPDLNPSFSPNGKTLAFTRQKIPGFY ADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTPDNKGFYATVEDAATNRIYSIDAKNGKVKAITEATDFSQPAIGKDGE LIATNQSFLYPARLVSINPRNGKIERLENFNDDILKDVDLGTYESVTYKGYQGKDIQMWVHYPAGFDRSKKYPLFMLVHG GPHNAITDGFHFRWNAQTFASWGYVTAWPNFHGSSGFGQEFADSINPDWKTKPLEDVLKAADWFKQQSWIDSDRMVAGGA SYGGYLTSIILGQPHPFKALLIHAAVYDMYAQMASDFAVHSTRFGYYWDNPELYKAISPHYFAANFNTPTLVSHGQLDYL VPATQGFELFHTLQSRHVESRMIYFPDENHWIMKPNNSVYWYNEVKKWMTHFAEPGAR
Sequences:
>Translated_698_residues MLTCHLAKIRNIIILVTVCITRRLIVKKTGILLLCLLLPFSSAFAEQGKPLSAELLWQLKRIGSPIVSPTGEHIIAPVTE YDLKADKGSTQLWRFDGKHNRAITAKGLRVSEPVFSPDGKFLAFVSQRNEDEASQIYLLPMDGPGEAQRLTDIPTGVNSI KWVGKHLYFISNIFPNQSWEEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHEL PRSDQSSASYDVSPNERWIAFNVYGSENKVDPKIDIFLATIGGNKAENLTADNQAPDLNPSFSPNGKTLAFTRQKIPGFY ADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTPDNKGFYATVEDAATNRIYSIDAKNGKVKAITEATDFSQPAIGKDGE LIATNQSFLYPARLVSINPRNGKIERLENFNDDILKDVDLGTYESVTYKGYQGKDIQMWVHYPAGFDRSKKYPLFMLVHG GPHNAITDGFHFRWNAQTFASWGYVTAWPNFHGSSGFGQEFADSINPDWKTKPLEDVLKAADWFKQQSWIDSDRMVAGGA SYGGYLTSIILGQPHPFKALLIHAAVYDMYAQMASDFAVHSTRFGYYWDNPELYKAISPHYFAANFNTPTLVSHGQLDYL VPATQGFELFHTLQSRHVESRMIYFPDENHWIMKPNNSVYWYNEVKKWMTHFAEPGAR >Mature_698_residues MLTCHLAKIRNIIILVTVCITRRLIVKKTGILLLCLLLPFSSAFAEQGKPLSAELLWQLKRIGSPIVSPTGEHIIAPVTE YDLKADKGSTQLWRFDGKHNRAITAKGLRVSEPVFSPDGKFLAFVSQRNEDEASQIYLLPMDGPGEAQRLTDIPTGVNSI KWVGKHLYFISNIFPNQSWEEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHEL PRSDQSSASYDVSPNERWIAFNVYGSENKVDPKIDIFLATIGGNKAENLTADNQAPDLNPSFSPNGKTLAFTRQKIPGFY ADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTPDNKGFYATVEDAATNRIYSIDAKNGKVKAITEATDFSQPAIGKDGE LIATNQSFLYPARLVSINPRNGKIERLENFNDDILKDVDLGTYESVTYKGYQGKDIQMWVHYPAGFDRSKKYPLFMLVHG GPHNAITDGFHFRWNAQTFASWGYVTAWPNFHGSSGFGQEFADSINPDWKTKPLEDVLKAADWFKQQSWIDSDRMVAGGA SYGGYLTSIILGQPHPFKALLIHAAVYDMYAQMASDFAVHSTRFGYYWDNPELYKAISPHYFAANFNTPTLVSHGQLDYL VPATQGFELFHTLQSRHVESRMIYFPDENHWIMKPNNSVYWYNEVKKWMTHFAEPGAR
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=432, Percent_Identity=21.9907407407407, Blast_Score=91, Evalue=5e-18, Organism=Homo sapiens, GI18765694, Length=232, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI16933540, Length=265, Percent_Identity=26.4150943396226, Blast_Score=73, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17552908, Length=206, Percent_Identity=26.6990291262136, Blast_Score=86, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17508017, Length=241, Percent_Identity=26.5560165975104, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17508019, Length=241, Percent_Identity=26.5560165975104, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 79002; Mature: 79002
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00708 PRO_ENDOPEP_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTCHLAKIRNIIILVTVCITRRLIVKKTGILLLCLLLPFSSAFAEQGKPLSAELLWQLK CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH RIGSPIVSPTGEHIIAPVTEYDLKADKGSTQLWRFDGKHNRAITAKGLRVSEPVFSPDGK HHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEECCCEECCCCCCCCCC FLAFVSQRNEDEASQIYLLPMDGPGEAQRLTDIPTGVNSIKWVGKHLYFISNIFPNQSWE EEEEEECCCCCCCCEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHEEHHCCCCCCHH EMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHEL HHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC PRSDQSSASYDVSPNERWIAFNVYGSENKVDPKIDIFLATIGGNKAENLTADNQAPDLNP CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC SFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTPDNKGFY CCCCCCCEEEEEHHHCCCEEECCCEEEEEEECCCEEEEECCCHHHHHHHEECCCCCCCEE ATVEDAATNRIYSIDAKNGKVKAITEATDFSQPAIGKDGELIATNQSFLYPARLVSINPR EEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCEECCEEEEEECCC NGKIERLENFNDDILKDVDLGTYESVTYKGYQGKDIQMWVHYPAGFDRSKKYPLFMLVHG CCCHHHHHCCCHHHHHHCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEC GPHNAITDGFHFRWNAQTFASWGYVTAWPNFHGSSGFGQEFADSINPDWKTKPLEDVLKA CCCCCCCCCEEEEECCCHHCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH ADWFKQQSWIDSDRMVAGGASYGGYLTSIILGQPHPFKALLIHAAVYDMYAQMASDFAVH HHHHHHHHCCCCCCEEECCCCCCCEEHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEE STRFGYYWDNPELYKAISPHYFAANFNTPTLVSHGQLDYLVPATQGFELFHTLQSRHVES CEEEEEEECCCHHHHHCCCCEEEEECCCCCEEECCCEEEEECCCCCHHHHHHHHHHCCCC RMIYFPDENHWIMKPNNSVYWYNEVKKWMTHFAEPGAR EEEEECCCCEEEECCCCCEEEHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLTCHLAKIRNIIILVTVCITRRLIVKKTGILLLCLLLPFSSAFAEQGKPLSAELLWQLK CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH RIGSPIVSPTGEHIIAPVTEYDLKADKGSTQLWRFDGKHNRAITAKGLRVSEPVFSPDGK HHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEECCCEECCCCCCCCCC FLAFVSQRNEDEASQIYLLPMDGPGEAQRLTDIPTGVNSIKWVGKHLYFISNIFPNQSWE EEEEEECCCCCCCCEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHEEHHCCCCCCHH EMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHEL HHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC PRSDQSSASYDVSPNERWIAFNVYGSENKVDPKIDIFLATIGGNKAENLTADNQAPDLNP CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC SFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTPDNKGFY CCCCCCCEEEEEHHHCCCEEECCCEEEEEEECCCEEEEECCCHHHHHHHEECCCCCCCEE ATVEDAATNRIYSIDAKNGKVKAITEATDFSQPAIGKDGELIATNQSFLYPARLVSINPR EEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCEECCEEEEEECCC NGKIERLENFNDDILKDVDLGTYESVTYKGYQGKDIQMWVHYPAGFDRSKKYPLFMLVHG CCCHHHHHCCCHHHHHHCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEC GPHNAITDGFHFRWNAQTFASWGYVTAWPNFHGSSGFGQEFADSINPDWKTKPLEDVLKA CCCCCCCCCEEEEECCCHHCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH ADWFKQQSWIDSDRMVAGGASYGGYLTSIILGQPHPFKALLIHAAVYDMYAQMASDFAVH HHHHHHHHCCCCCCEEECCCCCCCEEHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEE STRFGYYWDNPELYKAISPHYFAANFNTPTLVSHGQLDYLVPATQGFELFHTLQSRHVES CEEEEEEECCCHHHHHCCCCEEEEECCCCCEEECCCEEEEECCCCCHHHHHHHHHHCCCC RMIYFPDENHWIMKPNNSVYWYNEVKKWMTHFAEPGAR EEEEECCCCEEEECCCCCEEEHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]