| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877364
Identifier: 160877364
GI number: 160877364
Start: 5043365
End: 5043748
Strand: Direct
Name: 160877364
Synonym: Sbal195_4262
Alternate gene names: NA
Gene position: 5043365-5043748 (Clockwise)
Preceding gene: 160877356
Following gene: 160877365
Centisome position: 94.32
GC content: 44.01
Gene sequence:
>384_bases ATGCAGCTAAAACCTTTAGCACACAAGTCAATGGCGCCAAGCACTATGAAAATTACCTGTTTTATCGAATACAAAATAGA CCCGTTCAAATTGGAACAATTTGCCCAATATGCTGAAAACTGGAGCGATATTATTCCAGCCTACGGCGGCGAACTCCTTG GCTACTTTCTGCCACACGAAGGCACCAATGACACTGCATATGGTCTCATTAGCTTCGATAGTCTGGCCCACTATGAACGC TATAGAGACAAACTGAAGACAGAAGCCGCAGGCAAGGCAAATTTTCAGCTGGCCAAGCAAGGAGAATTTATTTTGAGTGA AAAACGCAGTTTCCTAAAGCCGATAGCCAAGACCTATCAAAGAGCTGCGGAGACAAAACTATGA
Upstream 100 bases:
>100_bases AATCAAGTTGGCAATAAAGGCAATGTTAGGTTCCATGCTTGTAATCTCATTCGGGGACAGTTCGATAACCATCGAAGCAT TAAGTTTTCAGGTAATTACA
Downstream 100 bases:
>100_bases TGGTCGTTATTTTTGAAGTTGTGCCCAATTCCGGCTGCCAAGAAAGGTATTTAGAGATAGCCGCCGACCTGAAATCGAGC CTGAGTGAAATTGCAGGATT
Product: NIPSNAP family protein
Products: NA
Alternate protein names: NIPSNAP Family Containing Protein; Nipsnap Domain Protein; Nipsnap Family Containing Protein; Nipsnap; NIPSNAP Domain-Containing Protein; NIPSNAP Superfamily; Nipsnap Domain-Containing Protein; Nipsnap Family Protein
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MQLKPLAHKSMAPSTMKITCFIEYKIDPFKLEQFAQYAENWSDIIPAYGGELLGYFLPHEGTNDTAYGLISFDSLAHYER YRDKLKTEAAGKANFQLAKQGEFILSEKRSFLKPIAKTYQRAAETKL
Sequences:
>Translated_127_residues MQLKPLAHKSMAPSTMKITCFIEYKIDPFKLEQFAQYAENWSDIIPAYGGELLGYFLPHEGTNDTAYGLISFDSLAHYER YRDKLKTEAAGKANFQLAKQGEFILSEKRSFLKPIAKTYQRAAETKL >Mature_127_residues MQLKPLAHKSMAPSTMKITCFIEYKIDPFKLEQFAQYAENWSDIIPAYGGELLGYFLPHEGTNDTAYGLISFDSLAHYER YRDKLKTEAAGKANFQLAKQGEFILSEKRSFLKPIAKTYQRAAETKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14535; Mature: 14535
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLKPLAHKSMAPSTMKITCFIEYKIDPFKLEQFAQYAENWSDIIPAYGGELLGYFLPHE CCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC GTNDTAYGLISFDSLAHYERYRDKLKTEAAGKANFQLAKQGEFILSEKRSFLKPIAKTYQ CCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHH RAAETKL HHHHCCC >Mature Secondary Structure MQLKPLAHKSMAPSTMKITCFIEYKIDPFKLEQFAQYAENWSDIIPAYGGELLGYFLPHE CCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC GTNDTAYGLISFDSLAHYERYRDKLKTEAAGKANFQLAKQGEFILSEKRSFLKPIAKTYQ CCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHH RAAETKL HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA