| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876892
Identifier: 160876892
GI number: 160876892
Start: 4467536
End: 4467766
Strand: Reverse
Name: 160876892
Synonym: Sbal195_3788
Alternate gene names: NA
Gene position: 4467766-4467536 (Counterclockwise)
Preceding gene: 160876895
Following gene: 160876891
Centisome position: 83.55
GC content: 39.83
Gene sequence:
>231_bases GTGACGAATGAAAAGCTAATTTTAACGCTGAAAATCTGCATTAGTGTGGGTATTTGTCTTATTGCGCTGGGTATTTATCT GCATAACTTTAATGACACTGTTGAAGCGATGGGCGTGCAAGGGATTATTATCAGCGCTATGTGTGTCGCCTTTGGCATGG CCTTGTCATTACCCACTAAGATGTATTTAACCTTTCTGTTAGTTAAGCGAGAGACTGAAAAACATCCATAA
Upstream 100 bases:
>100_bases TGCAAATGGCGGCTAGAATTTTGCAAACCTTGAGCGGATATCTGAATTTGCAGCGGACCAGTAGCAAAGCGACATAGCGG CAAAGGGTAAGGGCGGAACA
Downstream 100 bases:
>100_bases TTTTTCTTGCACAGAGTGTCACTCTGCGACCGATTGGCTTACTTGGCCTTCCTGTTATTTAATCTAAGCTCCAACTCAAA CCCGCTATGCAACCCACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MTNEKLILTLKICISVGICLIALGIYLHNFNDTVEAMGVQGIIISAMCVAFGMALSLPTKMYLTFLLVKRETEKHP
Sequences:
>Translated_76_residues MTNEKLILTLKICISVGICLIALGIYLHNFNDTVEAMGVQGIIISAMCVAFGMALSLPTKMYLTFLLVKRETEKHP >Mature_75_residues TNEKLILTLKICISVGICLIALGIYLHNFNDTVEAMGVQGIIISAMCVAFGMALSLPTKMYLTFLLVKRETEKHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8386; Mature: 8255
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 10.5 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNEKLILTLKICISVGICLIALGIYLHNFNDTVEAMGVQGIIISAMCVAFGMALSLPTK CCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHH MYLTFLLVKRETEKHP HHHHHHHHHHHCCCCC >Mature Secondary Structure TNEKLILTLKICISVGICLIALGIYLHNFNDTVEAMGVQGIIISAMCVAFGMALSLPTK CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHH MYLTFLLVKRETEKHP HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA