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The map label for this gene is ycaO [H]

Identifier: 160876891

GI number: 160876891

Start: 4465088

End: 4467277

Strand: Reverse

Name: ycaO [H]

Synonym: Sbal195_3787

Alternate gene names: 160876891

Gene position: 4467277-4465088 (Counterclockwise)

Preceding gene: 160876892

Following gene: 160876889

Centisome position: 83.54

GC content: 44.84

Gene sequence:

>2190_bases
ATGGAAATCAAAGTTAATTTTCTCGACAATCTTAGACTTGAAGCCAAGTTTGATGATTTTACCGTTACAGCCGATCAGCC
GATCCGCTACAAAGGTGATGGTTCTGCTCCTAGTCCGTTTGATTATTTCTTAGCGTCGTCAGCCCTGTGTGCGGCCTATT
TCGTGAAGGTGTATTGCAAAGCCCGCGATATTCCAACGGATAACATCAGACTGTCGCAGAACAATATTGTCGATCCAGAA
GATCGCTACAACCAGATTTTCCAAATTCAGGTTGAATTGCCAGAAGATATTTCCGATAAAGATCGCGAAGGTATTTTGCG
TTCAATTGACCGTTGTACCGTTAAAAAAGTGGTGCAAACGGGGCCAGAATTTAAGATTGAAACCGTTGAAAACCTAGACG
CAGACGCCAATGCCATGCTGATGGGCCAGCCTAATGGCGCATCGAGCACCTTTATTCTGGGTAAAGATCTGCCACTGGAG
CAGACCATTGCCAATATGACGGGCATGCTTGCCGATCTTGGAATGAAGATAGAGATCTCATCATGGCGCAATATCGTGCC
GAACGTGTGGTCACTGCATATTCGTGACGCCGCTTCACCAATGTGTTTTACCAATGGTAAAGGCGCGACCAAGGAAAGTG
CGCTGTGTTCAGCGCTCGGCGAGTTTATTGAGCGTTTGAATAATAACTTTTTCTATAATGATCAATTTTTTGGGACTGAA
ATCGCTAATAGCGAATTTGTGCATTACCCCAATGAAAAGTGGTTTGCGTTAGAAGAAGACGATGCGCTACCAGCGGGTAT
TCTGGATGACTATTGTTTAGAGATTTACAACCCAGACGACGAGCTGTGCGGTTCGCACTTGATTGATACTAATTCGGGCA
ATCTTAAGCGCGGCATTTGTGCTATCCCTTATGCGCGTAAATCTGACGGTGAAACGGTTTACTTCCCATCGAACCTGATT
GAAAACCTATTTTTAAGTAACGGCATGAGCGCGGGCAATAACCTGCAAGAAGCGCATGTGCAGTGTTTGTCAGAGATTTT
TGAGCGTGCCGTTAAACGCCAAATCATTGAGCAAGAAATTGTTCTGCCAGATGTGCCAATGCAGGTACTTGAAAAATATC
CCAGTATCCTCGCGGGCATTAACGGCTTAGAAGAGCAAGGTTTCCCAGTTGTAGTCAAAGACGCTTCACTCGGCGGTCAA
TTCCCTGTGATGTGCGTGACCCTAATGAACCCGAAAACCGGCGGCGTGTTTGCCTCATTTGGCGCGCACCCAAGCTTTGA
AGTGGCATTAGAGCGCAGTTTAACTGAGCTGTTGCAAGGCCGCAGTTTCGAAGGCTTAAACGATGTACCAAAACCGACGT
TTAATAGCATGGCGGTCAGCGAGCCAGAAAACTTTGTTGAGCATTTTATTGATTCAACAGGCGTGATTTCATGGCGCTTC
TTTAGCAGTAAATTCGATTATGAATTCTGTGAATGGGATTTCTCTGGCACCAGCGAAGAAGAGGCCAGCGGTTTGTTTGG
CATCTTAGAAGCGTTAGGTAAAGAGGTGTATATCGCTGAATTTACCGATTTAGGCGCATCGGCATGTCGAATTTTAGTAC
CTGATTACTCTGAGATTTATCCAGTTGATGACTTGATTTGGGATAATACCAACAAGGCGCTGGCATACCGTGAAGATATC
CTAAATCTGCATTCGTTAAGCACTAAACAGCTGGTTAATTTGGTTAATCGTTTAGAAGAAAGCCAACTCGATAACTACAC
GGATATCCGCACCTTAATCGGCATTGTATTCGATGAAAATACCGTTTGGGGTCAGCTCACGATTATCGAGCTTAAGATCC
TGATTTATTTGGCACTCGGTGCACACGAAGACGCGATTGAGCTAGTTGGTGAGTTCCTGCAGTTTAACGACAATACCGTC
AAACGCGGCCTGTTCTACCAAGCCATGAATGCTGTATTGGAAGTGACTTTAGATGACGAGCTAGAACTTGATGATTTTAT
CCACAACTTCAACCGCATGTTCGGTAAAGAAGTGATGGACAATGTCGTTGGCTCAGTCACAGGTAAAGTGCGTTTTTATG
GTTTAACTAAGACCAGCATGCAGCTCGAAGGCATTGAGCCACATCTAAGATTGATTGAAAGCTATAAAAAGCTGCATCAA
GCCCGTAAAGCTGCGAAAGCTCTGAATTAA

Upstream 100 bases:

>100_bases
CTAAAAACACCGATAATTCCCCCTTAATGACTCATTACCAATGACGCGACTTGGTCGATGGGCTGCTACAGACTCGCATA
TTTAGTGGAAATCATATTCA

Downstream 100 bases:

>100_bases
GCCTGTTGTTTGGCAATAGCTTAATGTGTTTAAAAGCGAACCTTAGGGTTCGCTTTTTTGTTGGCTGTCTTTTGATGCGT
GCTTCTTATGAGCACTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 729; Mature: 729

Protein sequence:

>729_residues
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCKARDIPTDNIRLSQNNIVDPE
DRYNQIFQIQVELPEDISDKDREGILRSIDRCTVKKVVQTGPEFKIETVENLDADANAMLMGQPNGASSTFILGKDLPLE
QTIANMTGMLADLGMKIEISSWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGTE
IANSEFVHYPNEKWFALEEDDALPAGILDDYCLEIYNPDDELCGSHLIDTNSGNLKRGICAIPYARKSDGETVYFPSNLI
ENLFLSNGMSAGNNLQEAHVQCLSEIFERAVKRQIIEQEIVLPDVPMQVLEKYPSILAGINGLEEQGFPVVVKDASLGGQ
FPVMCVTLMNPKTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSSKFDYEFCEWDFSGTSEEEASGLFGILEALGKEVYIAEFTDLGASACRILVPDYSEIYPVDDLIWDNTNKALAYREDI
LNLHSLSTKQLVNLVNRLEESQLDNYTDIRTLIGIVFDENTVWGQLTIIELKILIYLALGAHEDAIELVGEFLQFNDNTV
KRGLFYQAMNAVLEVTLDDELELDDFIHNFNRMFGKEVMDNVVGSVTGKVRFYGLTKTSMQLEGIEPHLRLIESYKKLHQ
ARKAAKALN

Sequences:

>Translated_729_residues
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCKARDIPTDNIRLSQNNIVDPE
DRYNQIFQIQVELPEDISDKDREGILRSIDRCTVKKVVQTGPEFKIETVENLDADANAMLMGQPNGASSTFILGKDLPLE
QTIANMTGMLADLGMKIEISSWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGTE
IANSEFVHYPNEKWFALEEDDALPAGILDDYCLEIYNPDDELCGSHLIDTNSGNLKRGICAIPYARKSDGETVYFPSNLI
ENLFLSNGMSAGNNLQEAHVQCLSEIFERAVKRQIIEQEIVLPDVPMQVLEKYPSILAGINGLEEQGFPVVVKDASLGGQ
FPVMCVTLMNPKTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSSKFDYEFCEWDFSGTSEEEASGLFGILEALGKEVYIAEFTDLGASACRILVPDYSEIYPVDDLIWDNTNKALAYREDI
LNLHSLSTKQLVNLVNRLEESQLDNYTDIRTLIGIVFDENTVWGQLTIIELKILIYLALGAHEDAIELVGEFLQFNDNTV
KRGLFYQAMNAVLEVTLDDELELDDFIHNFNRMFGKEVMDNVVGSVTGKVRFYGLTKTSMQLEGIEPHLRLIESYKKLHQ
ARKAAKALN
>Mature_729_residues
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCKARDIPTDNIRLSQNNIVDPE
DRYNQIFQIQVELPEDISDKDREGILRSIDRCTVKKVVQTGPEFKIETVENLDADANAMLMGQPNGASSTFILGKDLPLE
QTIANMTGMLADLGMKIEISSWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGTE
IANSEFVHYPNEKWFALEEDDALPAGILDDYCLEIYNPDDELCGSHLIDTNSGNLKRGICAIPYARKSDGETVYFPSNLI
ENLFLSNGMSAGNNLQEAHVQCLSEIFERAVKRQIIEQEIVLPDVPMQVLEKYPSILAGINGLEEQGFPVVVKDASLGGQ
FPVMCVTLMNPKTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSSKFDYEFCEWDFSGTSEEEASGLFGILEALGKEVYIAEFTDLGASACRILVPDYSEIYPVDDLIWDNTNKALAYREDI
LNLHSLSTKQLVNLVNRLEESQLDNYTDIRTLIGIVFDENTVWGQLTIIELKILIYLALGAHEDAIELVGEFLQFNDNTV
KRGLFYQAMNAVLEVTLDDELELDDFIHNFNRMFGKEVMDNVVGSVTGKVRFYGLTKTSMQLEGIEPHLRLIESYKKLHQ
ARKAAKALN

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=581, Percent_Identity=46.6437177280551, Blast_Score=544, Evalue=1e-156,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 81832; Mature: 81832

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
CEEEEEEHHCCEEEEECCCEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARDIPTDNIRLSQNNIVDPEDRYNQIFQIQVELPEDISDKDREGILRSIDRCTVKKVVQT
HCCCCCCCEEECCCCCCCCHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
GPEFKIETVENLDADANAMLMGQPNGASSTFILGKDLPLEQTIANMTGMLADLGMKIEIS
CCCEEEEEHHCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEC
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGTE
CHHCCCCCHHEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
IANSEFVHYPNEKWFALEEDDALPAGILDDYCLEIYNPDDELCGSHLIDTNSGNLKRGIC
CCCCCEEECCCCCEEEECCCCCCCCCHHHHHHHEEECCCHHHCCCCEEECCCCCCCCCEE
AIPYARKSDGETVYFPSNLIENLFLSNGMSAGNNLQEAHVQCLSEIFERAVKRQIIEQEI
ECCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
VLPDVPMQVLEKYPSILAGINGLEEQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEC
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEE
FSSKFDYEFCEWDFSGTSEEEASGLFGILEALGKEVYIAEFTDLGASACRILVPDYSEIY
ECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCEEEECCCCHHHC
PVDDLIWDNTNKALAYREDILNLHSLSTKQLVNLVNRLEESQLDNYTDIRTLIGIVFDEN
CCHHHEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCC
TVWGQLTIIELKILIYLALGAHEDAIELVGEFLQFNDNTVKRGLFYQAMNAVLEVTLDDE
CCEEEEEHHHHEEHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCC
LELDDFIHNFNRMFGKEVMDNVVGSVTGKVRFYGLTKTSMQLEGIEPHLRLIESYKKLHQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHH
ARKAAKALN
HHHHHHCCC
>Mature Secondary Structure
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
CEEEEEEHHCCEEEEECCCEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARDIPTDNIRLSQNNIVDPEDRYNQIFQIQVELPEDISDKDREGILRSIDRCTVKKVVQT
HCCCCCCCEEECCCCCCCCHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
GPEFKIETVENLDADANAMLMGQPNGASSTFILGKDLPLEQTIANMTGMLADLGMKIEIS
CCCEEEEEHHCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEC
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGTE
CHHCCCCCHHEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
IANSEFVHYPNEKWFALEEDDALPAGILDDYCLEIYNPDDELCGSHLIDTNSGNLKRGIC
CCCCCEEECCCCCEEEECCCCCCCCCHHHHHHHEEECCCHHHCCCCEEECCCCCCCCCEE
AIPYARKSDGETVYFPSNLIENLFLSNGMSAGNNLQEAHVQCLSEIFERAVKRQIIEQEI
ECCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
VLPDVPMQVLEKYPSILAGINGLEEQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEC
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEE
FSSKFDYEFCEWDFSGTSEEEASGLFGILEALGKEVYIAEFTDLGASACRILVPDYSEIY
ECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCEEEECCCCHHHC
PVDDLIWDNTNKALAYREDILNLHSLSTKQLVNLVNRLEESQLDNYTDIRTLIGIVFDEN
CCHHHEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCC
TVWGQLTIIELKILIYLALGAHEDAIELVGEFLQFNDNTVKRGLFYQAMNAVLEVTLDDE
CCEEEEEHHHHEEHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCC
LELDDFIHNFNRMFGKEVMDNVVGSVTGKVRFYGLTKTSMQLEGIEPHLRLIESYKKLHQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHH
ARKAAKALN
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]