| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876895
Identifier: 160876895
GI number: 160876895
Start: 4470165
End: 4470581
Strand: Reverse
Name: 160876895
Synonym: Sbal195_3791
Alternate gene names: NA
Gene position: 4470581-4470165 (Counterclockwise)
Preceding gene: 160876896
Following gene: 160876892
Centisome position: 83.6
GC content: 48.92
Gene sequence:
>417_bases ATGAACGACGACATTAGTATCTCGCTGCCCTCGCTGATTCATCGAATTGGGCGGGAGGCGGTTAAACAAGCTCAAGCGAT TGCAACCCTATATGATTGCGAGCTTAAGCGTGTGAGGCGTTCAAGGAATTGGTGCATAGTTGGCGCGGCGATTAAGATCC AATCCTGCAGTGCGCATTTACAAAGTGAGCCATTGCTGGCGCAGCAGTTAATCGCTAAAGATGGCCAGTTTGGCTATCTT ATCAAAAAGTTGGAGTCAGCCTTGCTGCAACATACGGACAAGCTAGAGCCCTTAGACGCTAAGTTGATTCGGCTTATCAC AGACAATCCCGCGATCACTTTAGGTGAGTTGATGCAACTGACGCAATGCACTATCACAGAGGCCAGATTGGCACGTTTTC AAGCCGACTCTTGGTAG
Upstream 100 bases:
>100_bases GTACACTGCCGCGCATTGAATTTTGTATTTGAATCTAAAGTCGAGCAGGCTTTTCCCTTTATCCATGCAGGCATAATAGA GCGGCGATGAACCAAGCGTT
Downstream 100 bases:
>100_bases TTTGCTTACTTTGCGTTCTCGCTATGCGCCTCTATTGCTTGGCTGCTTTTTCTAACACTTTTATTTGATTTTCGATTTGC TCGGCTTCAGCGGTCAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MNDDISISLPSLIHRIGREAVKQAQAIATLYDCELKRVRRSRNWCIVGAAIKIQSCSAHLQSEPLLAQQLIAKDGQFGYL IKKLESALLQHTDKLEPLDAKLIRLITDNPAITLGELMQLTQCTITEARLARFQADSW
Sequences:
>Translated_138_residues MNDDISISLPSLIHRIGREAVKQAQAIATLYDCELKRVRRSRNWCIVGAAIKIQSCSAHLQSEPLLAQQLIAKDGQFGYL IKKLESALLQHTDKLEPLDAKLIRLITDNPAITLGELMQLTQCTITEARLARFQADSW >Mature_138_residues MNDDISISLPSLIHRIGREAVKQAQAIATLYDCELKRVRRSRNWCIVGAAIKIQSCSAHLQSEPLLAQQLIAKDGQFGYL IKKLESALLQHTDKLEPLDAKLIRLITDNPAITLGELMQLTQCTITEARLARFQADSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15481; Mature: 15481
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDDISISLPSLIHRIGREAVKQAQAIATLYDCELKRVRRSRNWCIVGAAIKIQSCSAHL CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEHHHHHHH QSEPLLAQQLIAKDGQFGYLIKKLESALLQHTDKLEPLDAKLIRLITDNPAITLGELMQL CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEHHHHHHH TQCTITEARLARFQADSW HHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNDDISISLPSLIHRIGREAVKQAQAIATLYDCELKRVRRSRNWCIVGAAIKIQSCSAHL CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEHHHHHHH QSEPLLAQQLIAKDGQFGYLIKKLESALLQHTDKLEPLDAKLIRLITDNPAITLGELMQL CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEHHHHHHH TQCTITEARLARFQADSW HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA