| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is cysZ [H]
Identifier: 160875872
GI number: 160875872
Start: 3285489
End: 3286268
Strand: Direct
Name: cysZ [H]
Synonym: Sbal195_2761
Alternate gene names: 160875872
Gene position: 3285489-3286268 (Clockwise)
Preceding gene: 160875859
Following gene: 160875875
Centisome position: 61.44
GC content: 47.82
Gene sequence:
>780_bases ATGACACAGAAGAAAACCTTGCCCTTCCCAGCCAAAAGCGGCGTTAATTATTTTCTCGATGGCTTTGGTTTAATTACACG TAAAGGCCTGCGCACTTTCGTATTTATTCCCTTGATGATCAACCTGCTGCTGTTTGCAGGCGTCATTTATGTAGCAATAG GCCAGTTGGACGCCATGTTCACTTGGATGAACGCCCAGCTGCCTGACTACTTAAGCTGGTTAAATTTCTTACTTTGGCCG CTCGCAGTGACCACTATGCTGGTGATGCTCGCCTTTGTGTTTAGCTCGGTGATGAACTGGCTCGCCGCCCCCTTTAATGG TCTGTTGGCTGAAAAAGTCGAGCAGCTATTAACTGGCAAGCCGCTGAATACCGGTACTGGCATAGATTTAATCAAAGACT TACCGCGTATCCTTGGGCGTGAGTGGATCAAGCTCAAGTACTATCTGCCCCGCGCATTGGTGTTTTTATTGCTGTTTTTA GTGCCTATGGTGGGCCAAACGCTGGCGCCAATCTTATGGTTCCTGTTCAGCGCTTGGATGATGGCAATTCAGTACTGCGA TTATCCCTTCGATAACCATAAGGTCAGTTTTAAGGATATGCGCTTTGCCTTGAATCAAACCCGTGGCACGAGTTTTAGCT TTGGCGCTACAGTGACACTGTTTTCGATGATCCCTATCGTCAACTTTATCGTGATGCCTGTGGCGATTTGTGGCGCAACG GCCATGTGGGTCGACAAGTATCGTGAAGCCTACCGCAATCATGTAATAGCCCCAGAATAA
Upstream 100 bases:
>100_bases GGCTTTTAGCTTGTCATCTGCCCATGAGTTGATCACAATCGCAGTTATCTTTATATCAGGCTGTCTCTCAAGCTGTAGCC CAACTTTTTGGAAAGACGAT
Downstream 100 bases:
>100_bases TCAAAGATACAAATACTTATCTAAAATGATGTGGGTTTGATATCGATTCCTGCAACATAAAAACAGCCTCAATTGAGGCT GTTTTTATTGATAGGCTTTT
Product: putative sulfate transport protein CysZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTQKKTLPFPAKSGVNYFLDGFGLITRKGLRTFVFIPLMINLLLFAGVIYVAIGQLDAMFTWMNAQLPDYLSWLNFLLWP LAVTTMLVMLAFVFSSVMNWLAAPFNGLLAEKVEQLLTGKPLNTGTGIDLIKDLPRILGREWIKLKYYLPRALVFLLLFL VPMVGQTLAPILWFLFSAWMMAIQYCDYPFDNHKVSFKDMRFALNQTRGTSFSFGATVTLFSMIPIVNFIVMPVAICGAT AMWVDKYREAYRNHVIAPE
Sequences:
>Translated_259_residues MTQKKTLPFPAKSGVNYFLDGFGLITRKGLRTFVFIPLMINLLLFAGVIYVAIGQLDAMFTWMNAQLPDYLSWLNFLLWP LAVTTMLVMLAFVFSSVMNWLAAPFNGLLAEKVEQLLTGKPLNTGTGIDLIKDLPRILGREWIKLKYYLPRALVFLLLFL VPMVGQTLAPILWFLFSAWMMAIQYCDYPFDNHKVSFKDMRFALNQTRGTSFSFGATVTLFSMIPIVNFIVMPVAICGAT AMWVDKYREAYRNHVIAPE >Mature_258_residues TQKKTLPFPAKSGVNYFLDGFGLITRKGLRTFVFIPLMINLLLFAGVIYVAIGQLDAMFTWMNAQLPDYLSWLNFLLWPL AVTTMLVMLAFVFSSVMNWLAAPFNGLLAEKVEQLLTGKPLNTGTGIDLIKDLPRILGREWIKLKYYLPRALVFLLLFLV PMVGQTLAPILWFLFSAWMMAIQYCDYPFDNHKVSFKDMRFALNQTRGTSFSFGATVTLFSMIPIVNFIVMPVAICGATA MWVDKYREAYRNHVIAPE
Specific function: Possibly involved in sulfate transport [H]
COG id: COG2981
COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CysZ family [H]
Homologues:
Organism=Escherichia coli, GI1788753, Length=241, Percent_Identity=53.9419087136929, Blast_Score=280, Evalue=5e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022985 - InterPro: IPR007496 [H]
Pfam domain/function: PF04401 DUF540 [H]
EC number: NA
Molecular weight: Translated: 29510; Mature: 29379
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKKTLPFPAKSGVNYFLDGFGLITRKGLRTFVFIPLMINLLLFAGVIYVAIGQLDAMF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TWMNAQLPDYLSWLNFLLWPLAVTTMLVMLAFVFSSVMNWLAAPFNGLLAEKVEQLLTGK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC PLNTGTGIDLIKDLPRILGREWIKLKYYLPRALVFLLLFLVPMVGQTLAPILWFLFSAWM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAIQYCDYPFDNHKVSFKDMRFALNQTRGTSFSFGATVTLFSMIPIVNFIVMPVAICGAT HHHHHHCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AMWVDKYREAYRNHVIAPE HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TQKKTLPFPAKSGVNYFLDGFGLITRKGLRTFVFIPLMINLLLFAGVIYVAIGQLDAMF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TWMNAQLPDYLSWLNFLLWPLAVTTMLVMLAFVFSSVMNWLAAPFNGLLAEKVEQLLTGK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC PLNTGTGIDLIKDLPRILGREWIKLKYYLPRALVFLLLFLVPMVGQTLAPILWFLFSAWM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAIQYCDYPFDNHKVSFKDMRFALNQTRGTSFSFGATVTLFSMIPIVNFIVMPVAICGAT HHHHHHCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AMWVDKYREAYRNHVIAPE HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA