| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is cysK [H]
Identifier: 160875875
GI number: 160875875
Start: 3289050
End: 3290018
Strand: Direct
Name: cysK [H]
Synonym: Sbal195_2764
Alternate gene names: 160875875
Gene position: 3289050-3290018 (Clockwise)
Preceding gene: 160875872
Following gene: 160875876
Centisome position: 61.51
GC content: 46.85
Gene sequence:
>969_bases ATGAGCAAAATTTTCGAAGACAATTCATATACTATTGGTAATACCCCGCTAGTACGTTTAAACCGTGTTAGCCAAGGTAA AGTGCTGGCCAAAGTCGAAGCGCGTAACCCAAGTTTCAGTGTTAAATGCCGTATCGGTGCCAATATGATTTGGGATGCCG AGAAAAAGGGTCTACTGACTAAAGACCACGAGCTGATTGAGCCGACGTCTGGCAACACAGGTATTGCGCTGGCGTATGTT GCCGCGGCCCGTGGTTATAAGCTTACCCTAACGATGCCAAATACCATGAGTTTAGAGCGTCGTAAGCTGCTCAAAGCCCT TGGCGCAAATCTCGTGCTGACAGAAGGCGCGAAAGGCATGAAAGGTGCAATTGATAAAGCGGAAGAAATCCGTCAATCGG CTCCTGAAAAATACATTTTATTACAGCAGTTTAATAACCCTGCTAACCCAGAAATCCATGAAAAAACCACAGGTCCAGAA ATCTGGAATGATACCGATGGCGAAGTGGATGTGTTTGTTGCCGGTGTAGGTACTGGCGGTACGATTACAGGTGTCAGCCG TTACTTGAAAAAAGTGGCAGGCAAAACCATTACCTCTGTGGCGGTTGAGCCAGCAGATTCTCCTGTGATTGCGCAAACCT TAGCGGGTTTACCAGTACAACCTGGTCCACATAAAATCCAAGGTATTGGTGCAGGCTTTATCCCTGGTAACTTAGATTTA GAGTTGATTGACCGCGTAGAAGCTGTCACTAACGATGAAGCTATCGACATGGCCCGCCGCTTAATGCAAGAAGAAGGCAT TTTAGTGGGTATTTCATCGGGTGCGGCCGTTGTCGCCGCAAACCGTATCGCTGAATTGCCAGAATTTGCGGGCAAAACCA TTGTGGTAATTTTGCCATCGGCTGCCGAACGTTACTTATCTTCAGTTTTGTTCCAAGGCCAATTCGGCGACGAAGAAAAC ATTCAATAG
Upstream 100 bases:
>100_bases CCTTTAATAACCAAATCGAATAAAGAAGAACAAACAATCACTTCTAAAAGCGCCACAGCAGATTATGATTCAGTAGTGCC AACATAGGAGCAAGCAATCC
Downstream 100 bases:
>100_bases TCGACGTTAGATTCCCCTTTAAAATACCCAGCCCTTTAAATACCCAGCCTCTGCTGGGTATTTTTATTTGTGACATTGCA TTAATTAGATCCCGACTGCA
Product: cysteine synthase A
Products: NA
Alternate protein names: CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine sulfhydrylase A; Sulfate starvation-induced protein 5; SSI5 [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSKIFEDNSYTIGNTPLVRLNRVSQGKVLAKVEARNPSFSVKCRIGANMIWDAEKKGLLTKDHELIEPTSGNTGIALAYV AAARGYKLTLTMPNTMSLERRKLLKALGANLVLTEGAKGMKGAIDKAEEIRQSAPEKYILLQQFNNPANPEIHEKTTGPE IWNDTDGEVDVFVAGVGTGGTITGVSRYLKKVAGKTITSVAVEPADSPVIAQTLAGLPVQPGPHKIQGIGAGFIPGNLDL ELIDRVEAVTNDEAIDMARRLMQEEGILVGISSGAAVVAANRIAELPEFAGKTIVVILPSAAERYLSSVLFQGQFGDEEN IQ
Sequences:
>Translated_322_residues MSKIFEDNSYTIGNTPLVRLNRVSQGKVLAKVEARNPSFSVKCRIGANMIWDAEKKGLLTKDHELIEPTSGNTGIALAYV AAARGYKLTLTMPNTMSLERRKLLKALGANLVLTEGAKGMKGAIDKAEEIRQSAPEKYILLQQFNNPANPEIHEKTTGPE IWNDTDGEVDVFVAGVGTGGTITGVSRYLKKVAGKTITSVAVEPADSPVIAQTLAGLPVQPGPHKIQGIGAGFIPGNLDL ELIDRVEAVTNDEAIDMARRLMQEEGILVGISSGAAVVAANRIAELPEFAGKTIVVILPSAAERYLSSVLFQGQFGDEEN IQ >Mature_321_residues SKIFEDNSYTIGNTPLVRLNRVSQGKVLAKVEARNPSFSVKCRIGANMIWDAEKKGLLTKDHELIEPTSGNTGIALAYVA AARGYKLTLTMPNTMSLERRKLLKALGANLVLTEGAKGMKGAIDKAEEIRQSAPEKYILLQQFNNPANPEIHEKTTGPEI WNDTDGEVDVFVAGVGTGGTITGVSRYLKKVAGKTITSVAVEPADSPVIAQTLAGLPVQPGPHKIQGIGAGFIPGNLDLE LIDRVEAVTNDEAIDMARRLMQEEGILVGISSGAAVVAANRIAELPEFAGKTIVVILPSAAERYLSSVLFQGQFGDEENI Q
Specific function: Cysteine biosynthesis. [C]
COG id: COG0031
COG function: function code E; Cysteine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cysteine synthase/cystathionine beta- synthase family [H]
Homologues:
Organism=Homo sapiens, GI295821202, Length=334, Percent_Identity=39.2215568862275, Blast_Score=195, Evalue=5e-50, Organism=Homo sapiens, GI295821200, Length=334, Percent_Identity=39.2215568862275, Blast_Score=195, Evalue=5e-50, Organism=Homo sapiens, GI4557415, Length=334, Percent_Identity=39.2215568862275, Blast_Score=195, Evalue=5e-50, Organism=Escherichia coli, GI1788754, Length=320, Percent_Identity=77.1875, Blast_Score=479, Evalue=1e-136, Organism=Escherichia coli, GI2367138, Length=315, Percent_Identity=42.5396825396825, Blast_Score=213, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17535051, Length=304, Percent_Identity=53.9473684210526, Blast_Score=291, Evalue=4e-79, Organism=Caenorhabditis elegans, GI17562970, Length=313, Percent_Identity=49.5207667731629, Blast_Score=277, Evalue=6e-75, Organism=Caenorhabditis elegans, GI115535073, Length=314, Percent_Identity=54.140127388535, Blast_Score=276, Evalue=1e-74, Organism=Caenorhabditis elegans, GI32566674, Length=307, Percent_Identity=50.4885993485342, Blast_Score=275, Evalue=3e-74, Organism=Caenorhabditis elegans, GI17561720, Length=313, Percent_Identity=48.5623003194888, Blast_Score=246, Evalue=1e-65, Organism=Caenorhabditis elegans, GI32566672, Length=220, Percent_Identity=50.4545454545455, Blast_Score=204, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17534315, Length=317, Percent_Identity=39.7476340694006, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI25147552, Length=318, Percent_Identity=36.7924528301887, Blast_Score=137, Evalue=6e-33, Organism=Caenorhabditis elegans, GI17561716, Length=125, Percent_Identity=50.4, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6321594, Length=325, Percent_Identity=37.2307692307692, Blast_Score=172, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6321449, Length=334, Percent_Identity=33.2335329341317, Blast_Score=134, Evalue=2e-32, Organism=Drosophila melanogaster, GI24643623, Length=307, Percent_Identity=37.4592833876222, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI20129101, Length=307, Percent_Identity=37.4592833876222, Blast_Score=156, Evalue=2e-38,
Paralogues:
None
Copy number: 2820 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001216 - InterPro: IPR005856 - InterPro: IPR005859 - InterPro: IPR001926 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =2.5.1.47 [H]
Molecular weight: Translated: 34433; Mature: 34302
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00901 CYS_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIFEDNSYTIGNTPLVRLNRVSQGKVLAKVEARNPSFSVKCRIGANMIWDAEKKGLLT CCCEECCCCEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEEECCCEEECCCCCCCCC KDHELIEPTSGNTGIALAYVAAARGYKLTLTMPNTMSLERRKLLKALGANLVLTEGAKGM CCCHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCC KGAIDKAEEIRQSAPEKYILLQQFNNPANPEIHEKTTGPEIWNDTDGEVDVFVAGVGTGG HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC TITGVSRYLKKVAGKTITSVAVEPADSPVIAQTLAGLPVQPGPHKIQGIGAGFIPGNLDL HHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCH ELIDRVEAVTNDEAIDMARRLMQEEGILVGISSGAAVVAANRIAELPEFAGKTIVVILPS HHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEECC AAERYLSSVLFQGQFGDEENIQ HHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SKIFEDNSYTIGNTPLVRLNRVSQGKVLAKVEARNPSFSVKCRIGANMIWDAEKKGLLT CCEECCCCEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEEECCCEEECCCCCCCCC KDHELIEPTSGNTGIALAYVAAARGYKLTLTMPNTMSLERRKLLKALGANLVLTEGAKGM CCCHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCC KGAIDKAEEIRQSAPEKYILLQQFNNPANPEIHEKTTGPEIWNDTDGEVDVFVAGVGTGG HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC TITGVSRYLKKVAGKTITSVAVEPADSPVIAQTLAGLPVQPGPHKIQGIGAGFIPGNLDL HHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCH ELIDRVEAVTNDEAIDMARRLMQEEGILVGISSGAAVVAANRIAELPEFAGKTIVVILPS HHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEECC AAERYLSSVLFQGQFGDEENIQ HHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]