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The map label for this gene is yoaA [H]

Identifier: 160875644

GI number: 160875644

Start: 2993297

End: 2995219

Strand: Reverse

Name: yoaA [H]

Synonym: Sbal195_2532

Alternate gene names: 160875644

Gene position: 2995219-2993297 (Counterclockwise)

Preceding gene: 160875660

Following gene: 160875642

Centisome position: 56.01

GC content: 48.57

Gene sequence:

>1923_bases
ATGAGCAGACTTGCGGGCGAAGTGCAACGCGCATTTTTGCCCGATGGAGTATTGTCTAAACATATTCAAGGGTTTAGTGC
GCGAACAAGCCAAATGCAAATGGCGCAGCAAGTGAGTGAGGCGATAGCGTCTAAGAGTAATGTGGTGATTGAGGCGGGCA
CAGGGGTGGGTAAAACCTTTGCATATTTGATCCCCGCGATATTGAGCGGCAAGCAAGTTATCGTCAGTACGGGCAGTAAA
AATCTGCAAGAGCAGTTGTTTTTTAAAGACTTACCCGCACTGGTCGCCATGTTGGGGATTGAGCCCAAACTGGCGCTGCT
TAAGGGGCGCAATAATTATCTGTGCCAGTGGCGACTCGATAAGCAAATGAGCGAGGCGACACATATCGATGCGCGTTTAT
TAGATGATTTGTTGAAAATCAATCAGTGGGCGAGCACTTGTAAAGATGGTGATATTGGCGGTTTAACCTCAGTGCCTGAG
AATTCCTCGGCGCTGCCGCTCGTGGTCAGTACTAAAGAAAGCTGTATTGGTAAGCGCTGCGATTTTTATGATGCCTGCTT
TACGCGCAAGGCGCGCAGCCGAGCCATGGATGCCAAAATCATCGTGGTTAACCACCATTTGTTTTTCGCTGATAGCGTAC
TGAAAGACACGGGCTTTGCCGAGTTACTGCCCGATCCCGACGTAGTGATTTTCGATGAAGCGCATTTATTACCCGATATT
TGCGTTAACTATTTTGGCCAGCAATGTTCGAGTCGCACTATCGATGATTTTATTCAAAAGCTACTCGTTATTTATCAGAC
CGAACTCAGTGATACTGGGCAACTCGCGCAATTTTGTCAGCGTTGCCTCGCTAAATTAAGTGACTGGCATAATCAGTTAT
ATTCCTGCGGTGAATCCGACTGGCGTTTAGTGCTGGGCAATAAAGCGCTCGCGGCGGCATCATGGGATTTATTAGCGGAA
TTAACTGCGCTGCAGAATTTATTAATGGCCCATATTGGCCGCAGTGAATTGTTAGATGATATCGCCATCAAGTTGGCAGA
GCTGAATAATAAGCTCAGTGTGTTTTTTAACTGTGATAATAATCTGGCGGCCTACAGCATCGAATTTGGCAGTCGCTTTG
TGGTGCTACGAATTTCACCGATCAATATTGCCCGTGAGTGCCAGCAGTTATTTGTGCCTGAAACCAGCTGGATATTTACC
TCGGCAACCTTGCAGGTTAACCGCAGCCTTGCCCATTTCGCCAGAGAAATAGGCATCGTCGATGCGCAGCAAAGCATTCT
CGACAGTCCCTTCGATTATCCCCGCCACGCGGTATTTTGTGTGCCGAGACAACTTGGCAGCGTGACCAATCAACAGCAAG
CATTAAAGCAGCTGGTGGAGGTGTGCGTGCAAGCGATAGACGCGGCGCAGGGACGGACTTTTATTTTATTTACCAGCCAT
AAAATGCTCGAACAAGCGGCGTTGGCACTGCGAACTCGCACTCAGTATCCGCTGCTAGTACAAGGTCAAGCGGGTAAACA
GAGTCTGCTGACGAAGTTTCGCCAACTCGGAAATGCGGTGTTGCTCGGCACCAGCAGTTTTTGGGAAGGGGTGGATGTGC
GCGGCAAATTGTTAAGCTGCGTGATCATCGACAAATTACCTTTTGTGTCGCCCGATGAGCCTTTGTATCGTGCTCGAGCC
GATAATGTGAGTCGTCAGGGACTCGATCCCTTTACTGAAGTGTCCTTACCTCAGGCGATTATTGCTCTGAAACAAGGTGT
TGGCCGTCTTATTCGTGATGAAAAAGATCGCGGTGTGCTGATCCTTTGTGATAATCGCATCGTGAATCGCTATTACGGCC
AAGCCTTTTTAAACTCACTGCCGCCAATGGCGCGCACCCGTGACCTAGATAAAGCGCTGGAATTTTTAAGACAGATCCCT
TAG

Upstream 100 bases:

>100_bases
ATTGATTCTCCCTTTGACTCGCTCCCGCCAACCGACATCAAAGCATGCACCCTCTAAAGAAATAGTGGCTAAGCCTGCTG
CCGCAAAAGGCGCTGCTGCG

Downstream 100 bases:

>100_bases
AGCTGCTCCCTTAAGGAAGTGTTCTAAAAGTTCGAAAGTATTCAACGAATTCATAAAAAACGGGCTGGCGATAGTTTCGC
AAGCCCGTTTTCAGCTAAAG

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 639

Protein sequence:

>640_residues
MSRLAGEVQRAFLPDGVLSKHIQGFSARTSQMQMAQQVSEAIASKSNVVIEAGTGVGKTFAYLIPAILSGKQVIVSTGSK
NLQEQLFFKDLPALVAMLGIEPKLALLKGRNNYLCQWRLDKQMSEATHIDARLLDDLLKINQWASTCKDGDIGGLTSVPE
NSSALPLVVSTKESCIGKRCDFYDACFTRKARSRAMDAKIIVVNHHLFFADSVLKDTGFAELLPDPDVVIFDEAHLLPDI
CVNYFGQQCSSRTIDDFIQKLLVIYQTELSDTGQLAQFCQRCLAKLSDWHNQLYSCGESDWRLVLGNKALAAASWDLLAE
LTALQNLLMAHIGRSELLDDIAIKLAELNNKLSVFFNCDNNLAAYSIEFGSRFVVLRISPINIARECQQLFVPETSWIFT
SATLQVNRSLAHFAREIGIVDAQQSILDSPFDYPRHAVFCVPRQLGSVTNQQQALKQLVEVCVQAIDAAQGRTFILFTSH
KMLEQAALALRTRTQYPLLVQGQAGKQSLLTKFRQLGNAVLLGTSSFWEGVDVRGKLLSCVIIDKLPFVSPDEPLYRARA
DNVSRQGLDPFTEVSLPQAIIALKQGVGRLIRDEKDRGVLILCDNRIVNRYYGQAFLNSLPPMARTRDLDKALEFLRQIP

Sequences:

>Translated_640_residues
MSRLAGEVQRAFLPDGVLSKHIQGFSARTSQMQMAQQVSEAIASKSNVVIEAGTGVGKTFAYLIPAILSGKQVIVSTGSK
NLQEQLFFKDLPALVAMLGIEPKLALLKGRNNYLCQWRLDKQMSEATHIDARLLDDLLKINQWASTCKDGDIGGLTSVPE
NSSALPLVVSTKESCIGKRCDFYDACFTRKARSRAMDAKIIVVNHHLFFADSVLKDTGFAELLPDPDVVIFDEAHLLPDI
CVNYFGQQCSSRTIDDFIQKLLVIYQTELSDTGQLAQFCQRCLAKLSDWHNQLYSCGESDWRLVLGNKALAAASWDLLAE
LTALQNLLMAHIGRSELLDDIAIKLAELNNKLSVFFNCDNNLAAYSIEFGSRFVVLRISPINIARECQQLFVPETSWIFT
SATLQVNRSLAHFAREIGIVDAQQSILDSPFDYPRHAVFCVPRQLGSVTNQQQALKQLVEVCVQAIDAAQGRTFILFTSH
KMLEQAALALRTRTQYPLLVQGQAGKQSLLTKFRQLGNAVLLGTSSFWEGVDVRGKLLSCVIIDKLPFVSPDEPLYRARA
DNVSRQGLDPFTEVSLPQAIIALKQGVGRLIRDEKDRGVLILCDNRIVNRYYGQAFLNSLPPMARTRDLDKALEFLRQIP
>Mature_639_residues
SRLAGEVQRAFLPDGVLSKHIQGFSARTSQMQMAQQVSEAIASKSNVVIEAGTGVGKTFAYLIPAILSGKQVIVSTGSKN
LQEQLFFKDLPALVAMLGIEPKLALLKGRNNYLCQWRLDKQMSEATHIDARLLDDLLKINQWASTCKDGDIGGLTSVPEN
SSALPLVVSTKESCIGKRCDFYDACFTRKARSRAMDAKIIVVNHHLFFADSVLKDTGFAELLPDPDVVIFDEAHLLPDIC
VNYFGQQCSSRTIDDFIQKLLVIYQTELSDTGQLAQFCQRCLAKLSDWHNQLYSCGESDWRLVLGNKALAAASWDLLAEL
TALQNLLMAHIGRSELLDDIAIKLAELNNKLSVFFNCDNNLAAYSIEFGSRFVVLRISPINIARECQQLFVPETSWIFTS
ATLQVNRSLAHFAREIGIVDAQQSILDSPFDYPRHAVFCVPRQLGSVTNQQQALKQLVEVCVQAIDAAQGRTFILFTSHK
MLEQAALALRTRTQYPLLVQGQAGKQSLLTKFRQLGNAVLLGTSSFWEGVDVRGKLLSCVIIDKLPFVSPDEPLYRARAD
NVSRQGLDPFTEVSLPQAIIALKQGVGRLIRDEKDRGVLILCDNRIVNRYYGQAFLNSLPPMARTRDLDKALEFLRQIP

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=627, Percent_Identity=46.88995215311, Blast_Score=552, Evalue=1e-158,
Organism=Escherichia coli, GI1787018, Length=685, Percent_Identity=27.007299270073, Blast_Score=160, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 71175; Mature: 71044

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLAGEVQRAFLPDGVLSKHIQGFSARTSQMQMAQQVSEAIASKSNVVIEAGTGVGKTF
CCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
AYLIPAILSGKQVIVSTGSKNLQEQLFFKDLPALVAMLGIEPKLALLKGRNNYLCQWRLD
HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECC
KQMSEATHIDARLLDDLLKINQWASTCKDGDIGGLTSVPENSSALPLVVSTKESCIGKRC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCC
DFYDACFTRKARSRAMDAKIIVVNHHLFFADSVLKDTGFAELLPDPDVVIFDEAHLLPDI
CHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCEEEECCCHHHHHH
CVNYFGQQCSSRTIDDFIQKLLVIYQTELSDTGQLAQFCQRCLAKLSDWHNQLYSCGESD
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WRLVLGNKALAAASWDLLAELTALQNLLMAHIGRSELLDDIAIKLAELNNKLSVFFNCDN
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCC
NLAAYSIEFGSRFVVLRISPINIARECQQLFVPETSWIFTSATLQVNRSLAHFAREIGIV
CEEEEEEECCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCC
DAQQSILDSPFDYPRHAVFCVPRQLGSVTNQQQALKQLVEVCVQAIDAAQGRTFILFTSH
CCHHHHHCCCCCCCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECH
KMLEQAALALRTRTQYPLLVQGQAGKQSLLTKFRQLGNAVLLGTSSFWEGVDVRGKLLSC
HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCEEEEECCHHCCCCCCHHHHHHH
VIIDKLPFVSPDEPLYRARADNVSRQGLDPFTEVSLPQAIIALKQGVGRLIRDEKDRGVL
HEECCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
ILCDNRIVNRYYGQAFLNSLPPMARTRDLDKALEFLRQIP
EEECCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCC
>Mature Secondary Structure 
SRLAGEVQRAFLPDGVLSKHIQGFSARTSQMQMAQQVSEAIASKSNVVIEAGTGVGKTF
CCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
AYLIPAILSGKQVIVSTGSKNLQEQLFFKDLPALVAMLGIEPKLALLKGRNNYLCQWRLD
HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECC
KQMSEATHIDARLLDDLLKINQWASTCKDGDIGGLTSVPENSSALPLVVSTKESCIGKRC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCC
DFYDACFTRKARSRAMDAKIIVVNHHLFFADSVLKDTGFAELLPDPDVVIFDEAHLLPDI
CHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCEEEECCCHHHHHH
CVNYFGQQCSSRTIDDFIQKLLVIYQTELSDTGQLAQFCQRCLAKLSDWHNQLYSCGESD
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WRLVLGNKALAAASWDLLAELTALQNLLMAHIGRSELLDDIAIKLAELNNKLSVFFNCDN
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCC
NLAAYSIEFGSRFVVLRISPINIARECQQLFVPETSWIFTSATLQVNRSLAHFAREIGIV
CEEEEEEECCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCC
DAQQSILDSPFDYPRHAVFCVPRQLGSVTNQQQALKQLVEVCVQAIDAAQGRTFILFTSH
CCHHHHHCCCCCCCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECH
KMLEQAALALRTRTQYPLLVQGQAGKQSLLTKFRQLGNAVLLGTSSFWEGVDVRGKLLSC
HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCEEEEECCHHCCCCCCHHHHHHH
VIIDKLPFVSPDEPLYRARADNVSRQGLDPFTEVSLPQAIIALKQGVGRLIRDEKDRGVL
HEECCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
ILCDNRIVNRYYGQAFLNSLPPMARTRDLDKALEFLRQIP
EEECCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]