| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875642
Identifier: 160875642
GI number: 160875642
Start: 2990157
End: 2990735
Strand: Reverse
Name: 160875642
Synonym: Sbal195_2530
Alternate gene names: NA
Gene position: 2990735-2990157 (Counterclockwise)
Preceding gene: 160875644
Following gene: 160875640
Centisome position: 55.93
GC content: 51.3
Gene sequence:
>579_bases ATGAATCCAGCATTTTATAGCCTAGCCACAGTCGCCGTTTTAACTTTGTCACTCGCCACTACCGAACCGGCTGTTGCCAC AGATGCGCCTACACTAGCTAAAGCCGCATCGGATAAAACCGCTGAGGCTTCACATGCAGGCATTTCGCAACCCGCGACTG CGTTAGCTGATACGTTAGCGACTCAAATTGCAGCGGTGGATTTTGCCGTGTTCGACAGTTTCAATAAGTGCGCAGCCCCC GCTGAACTCAAGAAACACGCGGCGTTTTTCACTGAAAATGTGGAGTTTTACCACGACACGGGCGGCGTAACGTGGAACCG CAAGGACATGATCGCCAATACCGAAAAATACGCCTGTGGTCATTACCGCCGCGAGTTAGTTGCGGGCACGATGAAAGTGT TTCCGGTGAAAGAGTTTGGCGCAATAGAGCAAGGCGTTCACCGTTTTTGCAGCTTTGAAACGGGCAACTGTGATGGTCTA GCCGACTTTGTCATTGTGTGGCGCAAACAGGACGAACAGTGGAAAGCCACTCGAGTGTTGAGCTATGGACATAGAACCGC CGAGATCAAAACGGACTAA
Upstream 100 bases:
>100_bases ACGCTTTGCTGACACTTCTGCTTCAGATTTGTGGCGCTATGCAGGTTTGTGATGTGAATCGTCGCCATAAAAAATTACTG CCAACATTCACGGAGAGAAT
Downstream 100 bases:
>100_bases ACCAAAGCTAGCTTTTAACAAGAAACTAGCCTCTAACAAAATGCAGTAATCGATTATTTGCGGGCATAGCCACATCTTGC TCGAGTGTTAAGCCTTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNPAFYSLATVAVLTLSLATTEPAVATDAPTLAKAASDKTAEASHAGISQPATALADTLATQIAAVDFAVFDSFNKCAAP AELKKHAAFFTENVEFYHDTGGVTWNRKDMIANTEKYACGHYRRELVAGTMKVFPVKEFGAIEQGVHRFCSFETGNCDGL ADFVIVWRKQDEQWKATRVLSYGHRTAEIKTD
Sequences:
>Translated_192_residues MNPAFYSLATVAVLTLSLATTEPAVATDAPTLAKAASDKTAEASHAGISQPATALADTLATQIAAVDFAVFDSFNKCAAP AELKKHAAFFTENVEFYHDTGGVTWNRKDMIANTEKYACGHYRRELVAGTMKVFPVKEFGAIEQGVHRFCSFETGNCDGL ADFVIVWRKQDEQWKATRVLSYGHRTAEIKTD >Mature_192_residues MNPAFYSLATVAVLTLSLATTEPAVATDAPTLAKAASDKTAEASHAGISQPATALADTLATQIAAVDFAVFDSFNKCAAP AELKKHAAFFTENVEFYHDTGGVTWNRKDMIANTEKYACGHYRRELVAGTMKVFPVKEFGAIEQGVHRFCSFETGNCDGL ADFVIVWRKQDEQWKATRVLSYGHRTAEIKTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20917; Mature: 20917
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPAFYSLATVAVLTLSLATTEPAVATDAPTLAKAASDKTAEASHAGISQPATALADTLA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCHHHHHHHHHH TQIAAVDFAVFDSFNKCAAPAELKKHAAFFTENVEFYHDTGGVTWNRKDMIANTEKYACG HHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHCCCEEEECCCCCEECCHHHHCCCHHHHHH HYRRELVAGTMKVFPVKEFGAIEQGVHRFCSFETGNCDGLADFVIVWRKQDEQWKATRVL HHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHH SYGHRTAEIKTD HCCCCEEEEECC >Mature Secondary Structure MNPAFYSLATVAVLTLSLATTEPAVATDAPTLAKAASDKTAEASHAGISQPATALADTLA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCHHHHHHHHHH TQIAAVDFAVFDSFNKCAAPAELKKHAAFFTENVEFYHDTGGVTWNRKDMIANTEKYACG HHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHCCCEEEECCCCCEECCHHHHCCCHHHHHH HYRRELVAGTMKVFPVKEFGAIEQGVHRFCSFETGNCDGLADFVIVWRKQDEQWKATRVL HHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHH SYGHRTAEIKTD HCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA