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The map label for this gene is insF1 [C]

Identifier: 160875660

GI number: 160875660

Start: 3013088

End: 3013897

Strand: Reverse

Name: insF1 [C]

Synonym: Sbal195_2548

Alternate gene names: 160875660

Gene position: 3013897-3013088 (Counterclockwise)

Preceding gene: 160875661

Following gene: 160875644

Centisome position: 56.36

GC content: 45.31

Gene sequence:

>810_bases
ATGAGTGTCAGTAAGTCAGGCTATTACGATTGGCATAAACGCCCAGCAAACGTGATAAGCGTTGAAACACTGAAGCTTTA
TCGCCTTGTTCGACAGCTATTTAAGCAAAGTCGAGGCAGCTTAGGGAATCGTGAAATGGTGAAGAAATTGCGCAAGGAAG
GCTACCAGGTTGGTCGCTATCTCGTTCGTAAAATTATGCACCGCCTTCGACTCAAAGTAACCCAGCGATGTGCTTACAAG
GTGACGACACAGCGAAAACACTCAGATGCAGTGGCTGATAACCTGTTAAACATGAACTTTAATCCAGTATCGGCTAATCA
GGTCTGGGCGAGTGATGTGACCTATTTAAAGACGGGTGAAGGCTGGATGTACTTAGCTGTGGTGATGGATTTATATTCAC
GCCGGATTGTGGGATGGCACATAGACCAACGCATGACCACAGATTTGATATCCAAGGCATTAATAAAAGCCTACAACCTG
CGCCAACCGGCCAGAGGGTTGGTATTTCACAGTGACCGAGGCTCGCAATATACCAGTAAGCAATTCGGTAGGCTGCTATC
GAGCTATGGTATCCGAGCCAGCATGGGTGATGTGGGTGCGTGTTGGGATAATGCTGTTGTTGAGCGTTTCTTTGGTAGCT
TGAAACACGATTGGATTTTTAAAGTTAATCAACCAACAAGGGAGTTTATGAAGCAAGATGTGACTGCTTACATGAAATAT
TACAACTTGGAGCGGCTGCATTCTGCTAATGACGATCTGTCACCGGTAGAGTTTGAAAATTCTCAAGTAAAAGTGTCCAG
TTTGGGTTGA

Upstream 100 bases:

>100_bases
TAAAAAAGGCAAGCGCCTTCTTTGCGAGAGAAATGAAGTAAGATTTCGTTTCATCAAACTGCAATCTCACCTATTCCCCA
TAGCACTGTTATGTCGAGTA

Downstream 100 bases:

>100_bases
CCAGTACATACTTCTTACTAGGTAACAGGACGGCGTATCACTGGAATGAGTGCGCATAATCAAACTCCATCAACAAAAAC
GCCTGCAATTGCAGGCGTTT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSVSKSGYYDWHKRPANVISVETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVRKIMHRLRLKVTQRCAYK
VTTQRKHSDAVADNLLNMNFNPVSANQVWASDVTYLKTGEGWMYLAVVMDLYSRRIVGWHIDQRMTTDLISKALIKAYNL
RQPARGLVFHSDRGSQYTSKQFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKY
YNLERLHSANDDLSPVEFENSQVKVSSLG

Sequences:

>Translated_269_residues
MSVSKSGYYDWHKRPANVISVETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVRKIMHRLRLKVTQRCAYK
VTTQRKHSDAVADNLLNMNFNPVSANQVWASDVTYLKTGEGWMYLAVVMDLYSRRIVGWHIDQRMTTDLISKALIKAYNL
RQPARGLVFHSDRGSQYTSKQFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKY
YNLERLHSANDDLSPVEFENSQVKVSSLG
>Mature_268_residues
SVSKSGYYDWHKRPANVISVETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVRKIMHRLRLKVTQRCAYKV
TTQRKHSDAVADNLLNMNFNPVSANQVWASDVTYLKTGEGWMYLAVVMDLYSRRIVGWHIDQRMTTDLISKALIKAYNLR
QPARGLVFHSDRGSQYTSKQFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKYY
NLERLHSANDDLSPVEFENSQVKVSSLG

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=211, Percent_Identity=36.4928909952607, Blast_Score=144, Evalue=7e-35,
Organism=Escherichia coli, GI1788405, Length=263, Percent_Identity=36.5019011406844, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1787263, Length=263, Percent_Identity=36.5019011406844, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1786753, Length=263, Percent_Identity=36.5019011406844, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1786570, Length=263, Percent_Identity=36.5019011406844, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1786490, Length=263, Percent_Identity=36.5019011406844, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1789981, Length=234, Percent_Identity=31.1965811965812, Blast_Score=131, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31256; Mature: 31125

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSKSGYYDWHKRPANVISVETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRY
CCCCCCCCCCHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LVRKIMHRLRLKVTQRCAYKVTTQRKHSDAVADNLLNMNFNPVSANQVWASDVTYLKTGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCEEECCC
GWMYLAVVMDLYSRRIVGWHIDQRMTTDLISKALIKAYNLRQPARGLVFHSDRGSQYTSK
CHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHH
QFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKY
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
YNLERLHSANDDLSPVEFENSQVKVSSLG
HHHHHHHCCCCCCCCEEECCCEEEEECCC
>Mature Secondary Structure 
SVSKSGYYDWHKRPANVISVETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRY
CCCCCCCCCHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LVRKIMHRLRLKVTQRCAYKVTTQRKHSDAVADNLLNMNFNPVSANQVWASDVTYLKTGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCEEECCC
GWMYLAVVMDLYSRRIVGWHIDQRMTTDLISKALIKAYNLRQPARGLVFHSDRGSQYTSK
CHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHH
QFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKY
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
YNLERLHSANDDLSPVEFENSQVKVSSLG
HHHHHHHCCCCCCCCEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]