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The map label for this gene is ruvB [H]

Identifier: 160875531

GI number: 160875531

Start: 2859387

End: 2860391

Strand: Reverse

Name: ruvB [H]

Synonym: Sbal195_2419

Alternate gene names: 160875531

Gene position: 2860391-2859387 (Counterclockwise)

Preceding gene: 160875532

Following gene: 160875530

Centisome position: 53.49

GC content: 51.84

Gene sequence:

>1005_bases
ATGATTGAGGCAGACAGACTCATCCAGCCGCAGATCCAAGCTCAAGATGAATCCATCGACAGGGCAATGCGCCCTAAAAT
GCTCGATGAATACACGGGCCAAGATGACACTCGGGCGCAGCTTAAGGTGTTTATTCAAGCAGCGAAGAATCGCAACGAAG
CCTTAGACCATATGTTGATCTACGGCCCGCCAGGACTGGGTAAAACCACCTTGGCCATGATTGTGGCGAACGAGATGGGA
GTGAACATTAAGTCCACCTCGGGCCCTGTGCTTGAAAAAGCGGGGGATCTCGCCGCGCTTCTGACCAATCTTGAATCCGG
TGATGTGCTATTCATCGATGAGATCCATCGATTAAGCCCAGTGGTAGAAGAGATTTTGTATCCTGCGATGGAAGATTATC
AGCTGGATATCATGATAGGTGAAGGGCCAGCAGCGCGTTCCATCAAGCTTGATTTACCGCCGTTCACTCTAGTGGGCGCG
ACAACACGGGCAGGGGCATTAACCTCACCACTGCGGGCGCGTTTTGGGATCCCGCTGCGGCTTGAGTTTTATAACATCAA
AGATTTAAGCACCATAGTCACGCGTTCGGCGCAGGTAATGGAATTAGATATTGATGCAGAAGGCGCATTTGAAATTGCGC
GCCGTTCACGCGGCACACCGCGAATAGCCAACCGATTGCTGCGCCGCGTGCGGGATTACGCGCAGGTGAAGCATGACGGT
GCAGTCACCAAGTTTGTGGCCGAACACGCTTTAGACTTGCTAGATGTGGATAGCGAAGGCTTCGATTATATGGACCGCAA
GCTATTACTGGCCATTATCGATAAGTTTATGGGCGGGCCCGTTGGGCTAGATAACTTAGCCGCGGCCATAGGCGAAGAAC
GTGAAACCATCGAAGATGTGTTAGAACCTTTCTTGATCCAACAAGGGTTTATCCAACGCACGCCCCGCGGCCGAATTGCA
ACCGTACGGGCATACCAGCATTTTGAGCTGATCAAACCCGAATAG

Upstream 100 bases:

>100_bases
AGGGTATGGATTCTGAAACTCTGATCAAAGCTGCCCTTAAGTCGATGCTTTAATTGAATAATGATGATAATTAAGATGAA
AGCTGCGAGAAGGAAGAACA

Downstream 100 bases:

>100_bases
CCATCTGCTTGATAATACCGATAATGAAAGGCGACCTAAGAGGTCGCCTTTTTTATGGTTAAAATTTACCTTTGGTTCGA
TCGGGGTGAAGTAAAGCGCA

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MIEADRLIQPQIQAQDESIDRAMRPKMLDEYTGQDDTRAQLKVFIQAAKNRNEALDHMLIYGPPGLGKTTLAMIVANEMG
VNIKSTSGPVLEKAGDLAALLTNLESGDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
TTRAGALTSPLRARFGIPLRLEFYNIKDLSTIVTRSAQVMELDIDAEGAFEIARRSRGTPRIANRLLRRVRDYAQVKHDG
AVTKFVAEHALDLLDVDSEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDVLEPFLIQQGFIQRTPRGRIA
TVRAYQHFELIKPE

Sequences:

>Translated_334_residues
MIEADRLIQPQIQAQDESIDRAMRPKMLDEYTGQDDTRAQLKVFIQAAKNRNEALDHMLIYGPPGLGKTTLAMIVANEMG
VNIKSTSGPVLEKAGDLAALLTNLESGDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
TTRAGALTSPLRARFGIPLRLEFYNIKDLSTIVTRSAQVMELDIDAEGAFEIARRSRGTPRIANRLLRRVRDYAQVKHDG
AVTKFVAEHALDLLDVDSEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDVLEPFLIQQGFIQRTPRGRIA
TVRAYQHFELIKPE
>Mature_334_residues
MIEADRLIQPQIQAQDESIDRAMRPKMLDEYTGQDDTRAQLKVFIQAAKNRNEALDHMLIYGPPGLGKTTLAMIVANEMG
VNIKSTSGPVLEKAGDLAALLTNLESGDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
TTRAGALTSPLRARFGIPLRLEFYNIKDLSTIVTRSAQVMELDIDAEGAFEIARRSRGTPRIANRLLRRVRDYAQVKHDG
AVTKFVAEHALDLLDVDSEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDVLEPFLIQQGFIQRTPRGRIA
TVRAYQHFELIKPE

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

Organism=Escherichia coli, GI1788167, Length=334, Percent_Identity=74.8502994011976, Blast_Score=518, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 37182; Mature: 37182

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEADRLIQPQIQAQDESIDRAMRPKMLDEYTGQDDTRAQLKVFIQAAKNRNEALDHMLI
CCCCCCCCCCHHHCCHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHEEEE
YGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLESGDVLFIDEIHRLSP
ECCCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIPLR
HHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCEE
LEFYNIKDLSTIVTRSAQVMELDIDAEGAFEIARRSRGTPRIANRLLRRVRDYAQVKHDG
EEEECCHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
AVTKFVAEHALDLLDVDSEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
HHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHH
LEPFLIQQGFIQRTPRGRIATVRAYQHFELIKPE
HHHHHHHHHHHHCCCCCCEEEEEEHHHEEECCCC
>Mature Secondary Structure
MIEADRLIQPQIQAQDESIDRAMRPKMLDEYTGQDDTRAQLKVFIQAAKNRNEALDHMLI
CCCCCCCCCCHHHCCHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHEEEE
YGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLESGDVLFIDEIHRLSP
ECCCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIPLR
HHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHCCCCEE
LEFYNIKDLSTIVTRSAQVMELDIDAEGAFEIARRSRGTPRIANRLLRRVRDYAQVKHDG
EEEECCHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
AVTKFVAEHALDLLDVDSEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
HHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHH
LEPFLIQQGFIQRTPRGRIATVRAYQHFELIKPE
HHHHHHHHHHHHCCCCCCEEEEEEHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA