| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is cpxR [H]
Identifier: 160875528
GI number: 160875528
Start: 2853449
End: 2854129
Strand: Reverse
Name: cpxR [H]
Synonym: Sbal195_2416
Alternate gene names: 160875528
Gene position: 2854129-2853449 (Counterclockwise)
Preceding gene: 160875530
Following gene: 160875527
Centisome position: 53.38
GC content: 42.0
Gene sequence:
>681_bases ATGAGTAAAATACTCTTAGTCGATGATGATCCCTTGTTTAGTGTGTGGTTGGCCGATGCCTTGGGCACACAAGGGCATGA AGTTGCATGTGCAGTAAATGGTGTTGATGGTTTGGCATGCATTGAAAGCTTTTCACCCGACATCATAGTGCTTGATTTAG TCATGCCACAAATGAATGGTTTTGAACTGTTAAAAGCGCGGGAATGCTCAACGCCGGTATTGATGATCTCAGCACGGGAT AATGAAGACGATCGCATCACAGGTTATGAATTGGGGGCCGATGATTTTTTGAGTAAACCATTTAGTATCAAAGAGCTATT TGTTCGCTTACGTGCTTTAGAGCGGCGTCTTTGTGTCAGTCAATCTCACTCGCCGCAAATAGCGACTGTAGCAGCGAAAG TGATTAACTTTGATGATATGAGTTATAGGATCACCATTGGCACGCGTTATGTCGATTTGACTCAAACCGAATTTAAATTA TTTAAATATCTGTTTGAAAGGAAAGGCCAAGTCATCACGAAACAAGAGTTGCAACGCTCAGTATTACAAAAAGATCTGGG CCGATTTGACCGCAATCTTGATATGCACATTAGTAACACTCGCCGTAAATTAGCCAACATCAGCTTGCCGCGTAACTTAA TCAATACAGTGCGAGGCCAAGGTTATAGTTTTATGGCTTAA
Upstream 100 bases:
>100_bases AGTTTTCAACATCACACTTCTTAACGAATGTAATAGGTCTAGAGTCATCTCGATTCGCATGGTAATATAAATGATATAGA TTCTCGTTTGGGTTTTAAGG
Downstream 100 bases:
>100_bases CACCATCGTTTACCACCTCGTTAACGGCTAAGTTTGACGGATGTTTGGCGTGAAACTTGGTCAATAAAAGGTCGACTGCA ACTGCCTTGACTGATTTTAC
Product: two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSKILLVDDDPLFSVWLADALGTQGHEVACAVNGVDGLACIESFSPDIIVLDLVMPQMNGFELLKARECSTPVLMISARD NEDDRITGYELGADDFLSKPFSIKELFVRLRALERRLCVSQSHSPQIATVAAKVINFDDMSYRITIGTRYVDLTQTEFKL FKYLFERKGQVITKQELQRSVLQKDLGRFDRNLDMHISNTRRKLANISLPRNLINTVRGQGYSFMA
Sequences:
>Translated_226_residues MSKILLVDDDPLFSVWLADALGTQGHEVACAVNGVDGLACIESFSPDIIVLDLVMPQMNGFELLKARECSTPVLMISARD NEDDRITGYELGADDFLSKPFSIKELFVRLRALERRLCVSQSHSPQIATVAAKVINFDDMSYRITIGTRYVDLTQTEFKL FKYLFERKGQVITKQELQRSVLQKDLGRFDRNLDMHISNTRRKLANISLPRNLINTVRGQGYSFMA >Mature_225_residues SKILLVDDDPLFSVWLADALGTQGHEVACAVNGVDGLACIESFSPDIIVLDLVMPQMNGFELLKARECSTPVLMISARDN EDDRITGYELGADDFLSKPFSIKELFVRLRALERRLCVSQSHSPQIATVAAKVINFDDMSYRITIGTRYVDLTQTEFKLF KYLFERKGQVITKQELQRSVLQKDLGRFDRNLDMHISNTRRKLANISLPRNLINTVRGQGYSFMA
Specific function: Member of a two-component regulatory system [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=39.2070484581498, Blast_Score=134, Evalue=6e-33, Organism=Escherichia coli, GI87082012, Length=226, Percent_Identity=31.4159292035398, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=34.9557522123894, Blast_Score=120, Evalue=8e-29, Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=31.2775330396476, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1786599, Length=229, Percent_Identity=31.4410480349345, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1789809, Length=235, Percent_Identity=31.9148936170213, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI1786911, Length=229, Percent_Identity=34.4978165938865, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=30.3571428571429, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI1787375, Length=230, Percent_Identity=28.695652173913, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=31.4159292035398, Blast_Score=100, Evalue=6e-23, Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=28.3842794759825, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1790552, Length=227, Percent_Identity=31.7180616740088, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=27.1929824561404, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788550, Length=118, Percent_Identity=33.8983050847458, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787487, Length=114, Percent_Identity=38.5964912280702, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=23.9316239316239, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1790299, Length=105, Percent_Identity=35.2380952380952, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25598; Mature: 25467
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKILLVDDDPLFSVWLADALGTQGHEVACAVNGVDGLACIESFSPDIIVLDLVMPQMNG CCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCEEEEEEECCCCCC FELLKARECSTPVLMISARDNEDDRITGYELGADDFLSKPFSIKELFVRLRALERRLCVS HHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHC QSHSPQIATVAAKVINFDDMSYRITIGTRYVDLTQTEFKLFKYLFERKGQVITKQELQRS CCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHCCCEECHHHHHHH VLQKDLGRFDRNLDMHISNTRRKLANISLPRNLINTVRGQGYSFMA HHHHHHHHHCCCCCEEECHHHHHHHCCCCCHHHHHHHCCCCEECCC >Mature Secondary Structure SKILLVDDDPLFSVWLADALGTQGHEVACAVNGVDGLACIESFSPDIIVLDLVMPQMNG CEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCEEEEEEECCCCCC FELLKARECSTPVLMISARDNEDDRITGYELGADDFLSKPFSIKELFVRLRALERRLCVS HHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHC QSHSPQIATVAAKVINFDDMSYRITIGTRYVDLTQTEFKLFKYLFERKGQVITKQELQRS CCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHCCCEECHHHHHHH VLQKDLGRFDRNLDMHISNTRRKLANISLPRNLINTVRGQGYSFMA HHHHHHHHHCCCCCEEECHHHHHHHCCCCCHHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]