| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875527
Identifier: 160875527
GI number: 160875527
Start: 2852097
End: 2853224
Strand: Reverse
Name: 160875527
Synonym: Sbal195_2415
Alternate gene names: NA
Gene position: 2853224-2852097 (Counterclockwise)
Preceding gene: 160875528
Following gene: 160875526
Centisome position: 53.36
GC content: 46.99
Gene sequence:
>1128_bases ATGCGGATCAGTGCCAACTTTGATGGCGGAAATATCCAAGTCGTCAATCTTGATAATAAAGACGATATTCAACTTGCTAT TCGTCCCGATGCGGGCGGCGAGTTTTATCAATGGTTCAATTTTCGATTCGAAGGTGAGGTGGGTAACCATTACACCTTAA ATATCATCAACGCGGGGACGGCTTCCTATACCAAGGGATGGGAAGACTATCAAGCAGTAGCAAGTTACGACCGTCAGCAT TGGTTCCGTATTCCTACACAGTATAAAGACGGCAAACTGAGCATTAGCTTAGAGCTGGATTGCGATGCGATTCAAATCGC TTACTTTGCGCCATACAGCTATGAGCGTCACTTAGATTTACTCAGCAGCGCCCAGTTACACCCAGATGTCAATTTAGAGC ATTTGGGCCTGACCTTAGATGGCCGCGATATTACCCTCATGAAAGTAGGGAATGGCGATCCTTCTAAACGCAATATTTGG ATCACCGCCAGACAACATCCGGGCGAAACCATGGCTGAATGGTTAGTCGAAGGTCTCGTGAATCGTTTACTCGATAATGA TTGTCCAACAGCGAAAGCGCTACTTGATAAAGCCAATTTTTATATAGTGCCGAACATGAATCCCGATGGCAGTGTCAGAG GCCATCTGCGCACCAATGCGATTGGGATTAATCTTAACCGCGAGTGGCAAACGCCGAGTTTAGAAAAGAGTCCGGAGGTG TACCACGTCGTCAACAAGATGCAGCAAACCGGTGTAGACTTGTTTTATGATGTCCACGGCGATGAAGGCTTACCCTATGT GTTTCTCGCAGGTTGTGAGGGCGTGCCTGCCTACAATGATAAGCTGGCGCAGCTGCAAGCGGACTTCAGTCAAGCATTAA CCTTAGCCAGTGCTGATTTCCAAACTCAGTTTGGCTATGACAAAGACGAGCCAGGCCAAGCGAATCTAACGGTTGCTTCT AATTGGGTCGCTCAGACCTTCGAGTGTTTATCCAATACCCTCGAAATGCCTTTTAAAGACAATAACAATCTGGCCGATCC TTTTGTGGGTTGGTCGCCAGAGCGCAGTATTTATTTAGGTGAAGCATCGCTTATCGCCATGCTCGCCGTTGTTGATAAAT TACGTTAG
Upstream 100 bases:
>100_bases GTTTTGGTTTATCCTATCGGCCATATAATAAAATGTGCCGCGTGCTATCAGTCGCGTGCCATTAACTGCCCTTAGCTTTA ACAACCTATTAGGAATCATT
Downstream 100 bases:
>100_bases GGCGAGGCTGATATGGCATTAATTGAATGTCCAGTGTGTCGCAAGCGGATGTCGAGTAAGGCGCCTGTATGTCCCCATTG TCAAGCGAGCACCAATGGTG
Product: peptidase M14 carboxypeptidase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MRISANFDGGNIQVVNLDNKDDIQLAIRPDAGGEFYQWFNFRFEGEVGNHYTLNIINAGTASYTKGWEDYQAVASYDRQH WFRIPTQYKDGKLSISLELDCDAIQIAYFAPYSYERHLDLLSSAQLHPDVNLEHLGLTLDGRDITLMKVGNGDPSKRNIW ITARQHPGETMAEWLVEGLVNRLLDNDCPTAKALLDKANFYIVPNMNPDGSVRGHLRTNAIGINLNREWQTPSLEKSPEV YHVVNKMQQTGVDLFYDVHGDEGLPYVFLAGCEGVPAYNDKLAQLQADFSQALTLASADFQTQFGYDKDEPGQANLTVAS NWVAQTFECLSNTLEMPFKDNNNLADPFVGWSPERSIYLGEASLIAMLAVVDKLR
Sequences:
>Translated_375_residues MRISANFDGGNIQVVNLDNKDDIQLAIRPDAGGEFYQWFNFRFEGEVGNHYTLNIINAGTASYTKGWEDYQAVASYDRQH WFRIPTQYKDGKLSISLELDCDAIQIAYFAPYSYERHLDLLSSAQLHPDVNLEHLGLTLDGRDITLMKVGNGDPSKRNIW ITARQHPGETMAEWLVEGLVNRLLDNDCPTAKALLDKANFYIVPNMNPDGSVRGHLRTNAIGINLNREWQTPSLEKSPEV YHVVNKMQQTGVDLFYDVHGDEGLPYVFLAGCEGVPAYNDKLAQLQADFSQALTLASADFQTQFGYDKDEPGQANLTVAS NWVAQTFECLSNTLEMPFKDNNNLADPFVGWSPERSIYLGEASLIAMLAVVDKLR >Mature_375_residues MRISANFDGGNIQVVNLDNKDDIQLAIRPDAGGEFYQWFNFRFEGEVGNHYTLNIINAGTASYTKGWEDYQAVASYDRQH WFRIPTQYKDGKLSISLELDCDAIQIAYFAPYSYERHLDLLSSAQLHPDVNLEHLGLTLDGRDITLMKVGNGDPSKRNIW ITARQHPGETMAEWLVEGLVNRLLDNDCPTAKALLDKANFYIVPNMNPDGSVRGHLRTNAIGINLNREWQTPSLEKSPEV YHVVNKMQQTGVDLFYDVHGDEGLPYVFLAGCEGVPAYNDKLAQLQADFSQALTLASADFQTQFGYDKDEPGQANLTVAS NWVAQTFECLSNTLEMPFKDNNNLADPFVGWSPERSIYLGEASLIAMLAVVDKLR
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI170763513, Length=322, Percent_Identity=28.8819875776398, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI190194403, Length=344, Percent_Identity=28.7790697674419, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI222352158, Length=308, Percent_Identity=28.2467532467532, Blast_Score=102, Evalue=7e-22, Organism=Homo sapiens, GI120444924, Length=323, Percent_Identity=27.2445820433437, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI31657119, Length=305, Percent_Identity=26.8852459016393, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI78482633, Length=288, Percent_Identity=26.7361111111111, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI118421091, Length=289, Percent_Identity=26.9896193771626, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI115533904, Length=374, Percent_Identity=28.6096256684492, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI193202888, Length=281, Percent_Identity=24.9110320284698, Blast_Score=88, Evalue=9e-18, Organism=Drosophila melanogaster, GI28571179, Length=233, Percent_Identity=29.1845493562232, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24641847, Length=231, Percent_Identity=28.5714285714286, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI161077807, Length=233, Percent_Identity=29.1845493562232, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24641845, Length=233, Percent_Identity=29.1845493562232, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI24651466, Length=316, Percent_Identity=26.5822784810127, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 42126; Mature: 42126
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISANFDGGNIQVVNLDNKDDIQLAIRPDAGGEFYQWFNFRFEGEVGNHYTLNIINAGT CEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEECCC ASYTKGWEDYQAVASYDRQHWFRIPTQYKDGKLSISLELDCDAIQIAYFAPYSYERHLDL CCCCCCHHHHHHHHHHCCHHEEECCCCCCCCEEEEEEEECCCEEEEEEECCCCHHHHHHH LSSAQLHPDVNLEHLGLTLDGRDITLMKVGNGDPSKRNIWITARQHPGETMAEWLVEGLV HHCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHH NRLLDNDCPTAKALLDKANFYIVPNMNPDGSVRGHLRTNAIGINLNREWQTPSLEKSPEV HHHHCCCCCHHHHHHCCCCEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCHH YHVVNKMQQTGVDLFYDVHGDEGLPYVFLAGCEGVPAYNDKLAQLQADFSQALTLASADF HHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCC QTQFGYDKDEPGQANLTVASNWVAQTFECLSNTLEMPFKDNNNLADPFVGWSPERSIYLG HHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEC EASLIAMLAVVDKLR CHHHHHHHHHHHHCC >Mature Secondary Structure MRISANFDGGNIQVVNLDNKDDIQLAIRPDAGGEFYQWFNFRFEGEVGNHYTLNIINAGT CEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEECCC ASYTKGWEDYQAVASYDRQHWFRIPTQYKDGKLSISLELDCDAIQIAYFAPYSYERHLDL CCCCCCHHHHHHHHHHCCHHEEECCCCCCCCEEEEEEEECCCEEEEEEECCCCHHHHHHH LSSAQLHPDVNLEHLGLTLDGRDITLMKVGNGDPSKRNIWITARQHPGETMAEWLVEGLV HHCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHH NRLLDNDCPTAKALLDKANFYIVPNMNPDGSVRGHLRTNAIGINLNREWQTPSLEKSPEV HHHHCCCCCHHHHHHCCCCEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCHH YHVVNKMQQTGVDLFYDVHGDEGLPYVFLAGCEGVPAYNDKLAQLQADFSQALTLASADF HHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCC QTQFGYDKDEPGQANLTVASNWVAQTFECLSNTLEMPFKDNNNLADPFVGWSPERSIYLG HHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEC EASLIAMLAVVDKLR CHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8320209 [H]