| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874837
Identifier: 160874837
GI number: 160874837
Start: 2069533
End: 2069829
Strand: Direct
Name: 160874837
Synonym: Sbal195_1721
Alternate gene names: NA
Gene position: 2069533-2069829 (Clockwise)
Preceding gene: 160874835
Following gene: 160874838
Centisome position: 38.7
GC content: 43.1
Gene sequence:
>297_bases ATGTCATCACTTCTGCAACAATTCCATGATGAGATTAGTTTACGTGGTTACTCGGCCCGTACGCGTAACGCTTATTTGTA TGCCATCACCCAACTGCAGCACTATGCAAACCAACCGTTCGATAACATTACGGATGAGCAGCTTACGGCTTATTTCCGTT ACTTAAATCTTGAGCGGCATCATTCCAGGGCCACCTTAAAGTTACAGCTTAATGGCATTCATTTTTTCTATGAACATGTC CTAGGGCGCGATTTTACGGTTCAGTTGAGTTTACCTAAACGTGGCTTTGTTGCTTAA
Upstream 100 bases:
>100_bases GCACGAATAAAATGTTGAACTAAGCCGCTGCGCGGAGCCCAAAGCGAACCACTGTTCCACACTTACTCCTAGGGATAATC CCTTACCTAGGAGGTCTACC
Downstream 100 bases:
>100_bases ATCGATGGAACTAAATCAAGAAGCTACGATCTGATCGGCTACACCCATTAATCGTCGTAGCCTCATGCCTAAACCTCGTT ACAAAACAACTAACTGGACG
Product: integrase domain-containing protein
Products: NA
Alternate protein names: Phage Integrase Family Site Specific Recombinase
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSSLLQQFHDEISLRGYSARTRNAYLYAITQLQHYANQPFDNITDEQLTAYFRYLNLERHHSRATLKLQLNGIHFFYEHV LGRDFTVQLSLPKRGFVA
Sequences:
>Translated_98_residues MSSLLQQFHDEISLRGYSARTRNAYLYAITQLQHYANQPFDNITDEQLTAYFRYLNLERHHSRATLKLQLNGIHFFYEHV LGRDFTVQLSLPKRGFVA >Mature_97_residues SSLLQQFHDEISLRGYSARTRNAYLYAITQLQHYANQPFDNITDEQLTAYFRYLNLERHHSRATLKLQLNGIHFFYEHVL GRDFTVQLSLPKRGFVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11606; Mature: 11475
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLLQQFHDEISLRGYSARTRNAYLYAITQLQHYANQPFDNITDEQLTAYFRYLNLERH CHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC HSRATLKLQLNGIHFFYEHVLGRDFTVQLSLPKRGFVA CCEEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCC >Mature Secondary Structure SSLLQQFHDEISLRGYSARTRNAYLYAITQLQHYANQPFDNITDEQLTAYFRYLNLERH HHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC HSRATLKLQLNGIHFFYEHVLGRDFTVQLSLPKRGFVA CCEEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA