| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874838
Identifier: 160874838
GI number: 160874838
Start: 2069894
End: 2070814
Strand: Direct
Name: 160874838
Synonym: Sbal195_1722
Alternate gene names: NA
Gene position: 2069894-2070814 (Clockwise)
Preceding gene: 160874837
Following gene: 160874839
Centisome position: 38.71
GC content: 47.77
Gene sequence:
>921_bases ATGCCTAAACCTCGTTACAAAACAACTAACTGGACGCAGTACAACAAAGCCTTAATAAACCGTGGTTCTCTGACCTTTTG GATTGATGAGGAAGCGATAGCCGAGTGGAAGCAAAACAAACAAGGCAAGCGCGGCAGACCTCGCCAATTCAGCGACTTAG CCATTACTACTGCACTGATGGTGAAACGCATATTCTCTATGCCGTTGAGAGCACTGCAAGGATTTCTAGACTCGGTATTT AAGCTGGCTAACATCCCGCTAGTTTGTCCCCACTACACCTGTATAAGCCGTCGAGCTAAGGAAGTTGAGGTTTCATTTAA AACTAAAACCAGAGGTGCGATACAACACCTCGCCATTGATGCCACTGGCCTCAAGGTTTATGGCGAAGGCGAATGGAAGG TCAAGAAGCATGGTACTGACGGGAAGCGTAGGGTTTGGCGTAAGCTGCATATCGCAGTAGATACTAGCACCCACGAAATA GTCGCAGCAGAGCTGAGCTTATCTAACGTAACCGATGCCGAAGTACTTCCCAACTTGCTTAAGCAGACACGTCGTAAAAT CATTGAGATATCAGGCGATGGTGCTTATGACACAAGGAATTGCCATGATGCCATACGGCTCAAGCGAGCTGTTCCGCTCA TTCCGCCACGAGAAGGGGCAGCCTTCTGGGAACGAGGACATCCTCGCAACTTAGCAGTGGGTTGCCAGAAGCTCTACGGC TCTAACAAGAAATGGAAAAAGCGGTATGGTTATCATAAGCGCTCGCTCTCAGAGACAGCAATGTATCGGGTAAAACAGTT GTTAGGTGGGAAATTAAGCCTGAGGGACTACAACGCTCAAGTTGGTGAGACTTACGCTATGATCAAAGCGCTGAACAAGC TTACAGGGCTAGGTATGCCTGAAACTCAGTATGTTGTTTAA
Upstream 100 bases:
>100_bases CAGTTGAGTTTACCTAAACGTGGCTTTGTTGCTTAAATCGATGGAACTAAATCAAGAAGCTACGATCTGATCGGCTACAC CCATTAATCGTCGTAGCCTC
Downstream 100 bases:
>100_bases GAACTGAACAACATGGGGCTACCATGTCTTCTCATCGAATTAAGCAACAAAGCCCCTAAACGTCCACACAAGCTGCCGCA ATTGCTTAGCTGCCAAGATA
Product: transposase IS4 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MPKPRYKTTNWTQYNKALINRGSLTFWIDEEAIAEWKQNKQGKRGRPRQFSDLAITTALMVKRIFSMPLRALQGFLDSVF KLANIPLVCPHYTCISRRAKEVEVSFKTKTRGAIQHLAIDATGLKVYGEGEWKVKKHGTDGKRRVWRKLHIAVDTSTHEI VAAELSLSNVTDAEVLPNLLKQTRRKIIEISGDGAYDTRNCHDAIRLKRAVPLIPPREGAAFWERGHPRNLAVGCQKLYG SNKKWKKRYGYHKRSLSETAMYRVKQLLGGKLSLRDYNAQVGETYAMIKALNKLTGLGMPETQYVV
Sequences:
>Translated_306_residues MPKPRYKTTNWTQYNKALINRGSLTFWIDEEAIAEWKQNKQGKRGRPRQFSDLAITTALMVKRIFSMPLRALQGFLDSVF KLANIPLVCPHYTCISRRAKEVEVSFKTKTRGAIQHLAIDATGLKVYGEGEWKVKKHGTDGKRRVWRKLHIAVDTSTHEI VAAELSLSNVTDAEVLPNLLKQTRRKIIEISGDGAYDTRNCHDAIRLKRAVPLIPPREGAAFWERGHPRNLAVGCQKLYG SNKKWKKRYGYHKRSLSETAMYRVKQLLGGKLSLRDYNAQVGETYAMIKALNKLTGLGMPETQYVV >Mature_305_residues PKPRYKTTNWTQYNKALINRGSLTFWIDEEAIAEWKQNKQGKRGRPRQFSDLAITTALMVKRIFSMPLRALQGFLDSVFK LANIPLVCPHYTCISRRAKEVEVSFKTKTRGAIQHLAIDATGLKVYGEGEWKVKKHGTDGKRRVWRKLHIAVDTSTHEIV AAELSLSNVTDAEVLPNLLKQTRRKIIEISGDGAYDTRNCHDAIRLKRAVPLIPPREGAAFWERGHPRNLAVGCQKLYGS NKKWKKRYGYHKRSLSETAMYRVKQLLGGKLSLRDYNAQVGETYAMIKALNKLTGLGMPETQYVV
Specific function: Required for transposition of transposon Tn903 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 34896; Mature: 34765
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPRYKTTNWTQYNKALINRGSLTFWIDEEAIAEWKQNKQGKRGRPRQFSDLAITTALM CCCCCCCCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH VKRIFSMPLRALQGFLDSVFKLANIPLVCPHYTCISRRAKEVEVSFKTKTRGAIQHLAID HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHCCCHHEEEEEECCHHHHHHHHEEE ATGLKVYGEGEWKVKKHGTDGKRRVWRKLHIAVDTSTHEIVAAELSLSNVTDAEVLPNLL ECCEEEEECCCEEEEECCCCHHHHHHHHHEEEEECCCCEEEEEEECCCCCCHHHHHHHHH KQTRRKIIEISGDGAYDTRNCHDAIRLKRAVPLIPPREGAAFWERGHPRNLAVGCQKLYG HHHHHHEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHC SNKKWKKRYGYHKRSLSETAMYRVKQLLGGKLSLRDYNAQVGETYAMIKALNKLTGLGMP CCHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCC ETQYVV CCCCCC >Mature Secondary Structure PKPRYKTTNWTQYNKALINRGSLTFWIDEEAIAEWKQNKQGKRGRPRQFSDLAITTALM CCCCCCCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH VKRIFSMPLRALQGFLDSVFKLANIPLVCPHYTCISRRAKEVEVSFKTKTRGAIQHLAID HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHCCCHHEEEEEECCHHHHHHHHEEE ATGLKVYGEGEWKVKKHGTDGKRRVWRKLHIAVDTSTHEIVAAELSLSNVTDAEVLPNLL ECCEEEEECCCEEEEECCCCHHHHHHHHHEEEEECCCCEEEEEEECCCCCCHHHHHHHHH KQTRRKIIEISGDGAYDTRNCHDAIRLKRAVPLIPPREGAAFWERGHPRNLAVGCQKLYG HHHHHHEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHC SNKKWKKRYGYHKRSLSETAMYRVKQLLGGKLSLRDYNAQVGETYAMIKALNKLTGLGMP CCHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCC ETQYVV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6270337; 6261245; 6271455 [H]