| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160874835
Identifier: 160874835
GI number: 160874835
Start: 2067126
End: 2067821
Strand: Direct
Name: 160874835
Synonym: Sbal195_1719
Alternate gene names: NA
Gene position: 2067126-2067821 (Clockwise)
Preceding gene: 160874832
Following gene: 160874837
Centisome position: 38.66
GC content: 45.26
Gene sequence:
>696_bases TTGGTAAATAATATAGAACTACGTGTATTTTGGAAACCGCACAACACATTTGCGGGCCAGACAACCCTGAGGGATTGCTG TGAACAGTTTTTATCGGCGCGAAGTGCAGCACTTAAGCCGGGCACTGTTGCTACGTACCAATTCTGCTTTAGAGCACATC TCTATGATGCCTTTGCTGATCGCAAAGTCGAAAGTATCACACTCGGCGAGTGGATAGATTTTTTCGATAAAAAGGCAATT CATAGTCGAGTCACCGCAGGTGCGATACTCAAACAGTTAAAGACGGTACTTAGCTGGTCCGTTCGCCGGCAAATGATATC GCTTGTTGATGTCCTTCAATTACGAGTCAGTGATGTGGGCTCCGCGCCCAAAGTCGGTTCGCGAGTACTCACCATTCTAG AGTGTGGCAAAATCATCCGTGAGCTTGATAAATGCCGCGCGACCAAAGCAGTAACCAATGCCATCAAGGCATGTTTACTA ACAGGGGCGCGGATATCAGAAATATTAAAATCCAAACGGGCTGATTTTGATCTTGAGTCGATGATCTGGACCGTCCCGAT AAACAATAGCAAAACTAATTTGCCAATCCGAAATCTCTGTAAAGAGCAGTGGGCCTTAATGGGATTTGACAGCAAAAAGT CTTACATTTTCTGGCTAAGAAAGGCCGAAATGGCACTGCTAGATAGGATGAATTAG
Upstream 100 bases:
>100_bases ATTTAGGATTGATAATCAACCTGGGCGCTTAACCCTTGCCCGCTATCCTGATTTTAAACTTGCTGACGCCCGGAAATAGG TCCCTGAGTGACTAAACTCA
Downstream 100 bases:
>100_bases AAGGAACGCCCTCTTGCGAGGGCTGACGGGTTAGCCGGTTGTCCACCAAGACTGCTAACCCGTTGACCGGATTTTATCAA AGGTTCGGACAGATACCTAT
Product: phage integrase family protein
Products: NA
Alternate protein names: Integrase; Integrase Of Prophage; Integrase Family Protein; Phage Integrase Family Site Specific Recombinase; Phage Integrase
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MVNNIELRVFWKPHNTFAGQTTLRDCCEQFLSARSAALKPGTVATYQFCFRAHLYDAFADRKVESITLGEWIDFFDKKAI HSRVTAGAILKQLKTVLSWSVRRQMISLVDVLQLRVSDVGSAPKVGSRVLTILECGKIIRELDKCRATKAVTNAIKACLL TGARISEILKSKRADFDLESMIWTVPINNSKTNLPIRNLCKEQWALMGFDSKKSYIFWLRKAEMALLDRMN
Sequences:
>Translated_231_residues MVNNIELRVFWKPHNTFAGQTTLRDCCEQFLSARSAALKPGTVATYQFCFRAHLYDAFADRKVESITLGEWIDFFDKKAI HSRVTAGAILKQLKTVLSWSVRRQMISLVDVLQLRVSDVGSAPKVGSRVLTILECGKIIRELDKCRATKAVTNAIKACLL TGARISEILKSKRADFDLESMIWTVPINNSKTNLPIRNLCKEQWALMGFDSKKSYIFWLRKAEMALLDRMN >Mature_231_residues MVNNIELRVFWKPHNTFAGQTTLRDCCEQFLSARSAALKPGTVATYQFCFRAHLYDAFADRKVESITLGEWIDFFDKKAI HSRVTAGAILKQLKTVLSWSVRRQMISLVDVLQLRVSDVGSAPKVGSRVLTILECGKIIRELDKCRATKAVTNAIKACLL TGARISEILKSKRADFDLESMIWTVPINNSKTNLPIRNLCKEQWALMGFDSKKSYIFWLRKAEMALLDRMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26278; Mature: 26278
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNNIELRVFWKPHNTFAGQTTLRDCCEQFLSARSAALKPGTVATYQFCFRAHLYDAFAD CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH RKVESITLGEWIDFFDKKAIHSRVTAGAILKQLKTVLSWSVRRQMISLVDVLQLRVSDVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SAPKVGSRVLTILECGKIIRELDKCRATKAVTNAIKACLLTGARISEILKSKRADFDLES CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHH MIWTVPINNSKTNLPIRNLCKEQWALMGFDSKKSYIFWLRKAEMALLDRMN EEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCC >Mature Secondary Structure MVNNIELRVFWKPHNTFAGQTTLRDCCEQFLSARSAALKPGTVATYQFCFRAHLYDAFAD CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH RKVESITLGEWIDFFDKKAIHSRVTAGAILKQLKTVLSWSVRRQMISLVDVLQLRVSDVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SAPKVGSRVLTILECGKIIRELDKCRATKAVTNAIKACLLTGARISEILKSKRADFDLES CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHH MIWTVPINNSKTNLPIRNLCKEQWALMGFDSKKSYIFWLRKAEMALLDRMN EEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA