| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874779
Identifier: 160874779
GI number: 160874779
Start: 2009933
End: 2010715
Strand: Direct
Name: 160874779
Synonym: Sbal195_1662
Alternate gene names: NA
Gene position: 2009933-2010715 (Clockwise)
Preceding gene: 160874776
Following gene: 160874780
Centisome position: 37.59
GC content: 41.63
Gene sequence:
>783_bases ATGTCCAAGGTAAGCAATAGAACAAAAATCGCTACTGCACTTGTTGGCGTGCTGGCATTAGCGAGCAGCAACTTCGTTGT TGCAGATCCTCTTACCGACGTGCAGAAAGCGGATAGTATGATCCATGCTGATGCTGCTGCGTCGCAAAAGAACGTTGATA AGTATTTCGATCAAGCACAAGACATGCTTTTTGAGTATGGTTCTGTCGCAGATGAACGCGAATCACTGAAATCATATAAC GATTATGTTGCCAGCTTAGTCGCTGATCAACAAAAGACAATGGACTCAGTGCAAGGTGACATCAATGGTGTTGATAAACT TCGCCAAGGCGTAGTGCCGTTAATGTTTAAAATGGTTGAGTCGTTAGAACAGTTTGTTCAATTAGATTTACCTTTCAACT CTGAAGTACGTACTAATCGTGTTAATGAGCTGAAAAACCTTCTTAATACTGCTGAAGTTACCTTAGCCGAAAAATACCGT TTAATTCTTGATGCTTATAGCATCGAGCGTGAATATGGTAGTGCGGTTGCTGTTAACCAAGGTAAGTTAAACCTAGATGG TAAAGAAGTATTGGTTGACTTCTTTAACTTAGGTCGTGTTGCTCTTTATGCACAGAGTTTAGATCAAAAGACTGGCTGGA TGTACAACCCAGAATCTAAGGGTTGGGACAAGTTAGATGACAGCTATTTGCGTGAACTGACTAAAGGTATCCGCATTGCC CGTAAACAAGGTGCTCTAGATCTATTTGCGTTACCAATTCCTGCTGCGGAGACTGCACAATAA
Upstream 100 bases:
>100_bases AAGACGAACTTACAGTAATCTTTTCGGCGAGCATTAATTGCTTCTCGTTTTGTTGCTGGTAAGTTAAACCTTTTTATTCA CTTCAAATTGGTTGGGAACT
Downstream 100 bases:
>100_bases TGAAGAAGTTAATTACTACAGCTGTGTTGGCTGCAAGTTTCTCTTTAACTGCTGGTATGGCTAGTGCTGCAGATGCGCCT AAGTCGATTGACCAATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Chromosome Segregation ATPase; MotA/lQ/ExbB Proton Channel
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSKVSNRTKIATALVGVLALASSNFVVADPLTDVQKADSMIHADAAASQKNVDKYFDQAQDMLFEYGSVADERESLKSYN DYVASLVADQQKTMDSVQGDINGVDKLRQGVVPLMFKMVESLEQFVQLDLPFNSEVRTNRVNELKNLLNTAEVTLAEKYR LILDAYSIEREYGSAVAVNQGKLNLDGKEVLVDFFNLGRVALYAQSLDQKTGWMYNPESKGWDKLDDSYLRELTKGIRIA RKQGALDLFALPIPAAETAQ
Sequences:
>Translated_260_residues MSKVSNRTKIATALVGVLALASSNFVVADPLTDVQKADSMIHADAAASQKNVDKYFDQAQDMLFEYGSVADERESLKSYN DYVASLVADQQKTMDSVQGDINGVDKLRQGVVPLMFKMVESLEQFVQLDLPFNSEVRTNRVNELKNLLNTAEVTLAEKYR LILDAYSIEREYGSAVAVNQGKLNLDGKEVLVDFFNLGRVALYAQSLDQKTGWMYNPESKGWDKLDDSYLRELTKGIRIA RKQGALDLFALPIPAAETAQ >Mature_259_residues SKVSNRTKIATALVGVLALASSNFVVADPLTDVQKADSMIHADAAASQKNVDKYFDQAQDMLFEYGSVADERESLKSYND YVASLVADQQKTMDSVQGDINGVDKLRQGVVPLMFKMVESLEQFVQLDLPFNSEVRTNRVNELKNLLNTAEVTLAEKYRL ILDAYSIEREYGSAVAVNQGKLNLDGKEVLVDFFNLGRVALYAQSLDQKTGWMYNPESKGWDKLDDSYLRELTKGIRIAR KQGALDLFALPIPAAETAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28917; Mature: 28786
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVSNRTKIATALVGVLALASSNFVVADPLTDVQKADSMIHADAAASQKNVDKYFDQAQ CCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMLFEYGSVADERESLKSYNDYVASLVADQQKTMDSVQGDINGVDKLRQGVVPLMFKMVE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SLEQFVQLDLPFNSEVRTNRVNELKNLLNTAEVTLAEKYRLILDAYSIEREYGSAVAVNQ HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC GKLNLDGKEVLVDFFNLGRVALYAQSLDQKTGWMYNPESKGWDKLDDSYLRELTKGIRIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH RKQGALDLFALPIPAAETAQ HHCCCEEEEEECCCCCCCCC >Mature Secondary Structure SKVSNRTKIATALVGVLALASSNFVVADPLTDVQKADSMIHADAAASQKNVDKYFDQAQ CCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMLFEYGSVADERESLKSYNDYVASLVADQQKTMDSVQGDINGVDKLRQGVVPLMFKMVE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SLEQFVQLDLPFNSEVRTNRVNELKNLLNTAEVTLAEKYRLILDAYSIEREYGSAVAVNQ HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC GKLNLDGKEVLVDFFNLGRVALYAQSLDQKTGWMYNPESKGWDKLDDSYLRELTKGIRIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH RKQGALDLFALPIPAAETAQ HHCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA