| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is exbB [C]
Identifier: 160874780
GI number: 160874780
Start: 2010715
End: 2012070
Strand: Direct
Name: exbB [C]
Synonym: Sbal195_1663
Alternate gene names: 160874780
Gene position: 2010715-2012070 (Clockwise)
Preceding gene: 160874779
Following gene: 160874781
Centisome position: 37.6
GC content: 42.4
Gene sequence:
>1356_bases ATGAAGAAGTTAATTACTACAGCTGTGTTGGCTGCAAGTTTCTCTTTAACTGCTGGTATGGCTAGTGCTGCAGATGCGCC TAAGTCGATTGACCAATTATTGCAACAAGTTAAAGTTGAACGCGCTGCAGAAGGAAAAATCAACAGCAAACGTGAGCAAG AATTCCAAGCTGAACGTGGTGATAAAGCTGCACTGTTAAAGCGTGAAAAAGATGCTTTAGCCGCTGAAAAACAACGTGGT AAAGATTTAAACCAAGCGTTCTTGGATAACGAGCGTAAAATTGCTCAGTTAGAAGAAGATCTGAAAACTGCTCAAGGTGA CTTGGGTGAGATGTTTGGTGTGGTTAAAGGTGAAGCCGGTGATTTCGCCGGTAAACTGGCAAGCTCAAACATAAGTGCTC AATACCCAAATCGTGATAAATTTATTGCTGATTTAGGTGCACGTAAACAATTACCAAAGATCGAAGAACTAGAGCAATTC TGGCAAGAACAGCTGTTTGAAATGGCTGAGTCTGGCAAGGTTGTTAAGTTTGAAGGTTCTGTTACTGGTATCGACGGAAG CGTTAAAACAACGACTATCCATCGTGTTGGTGCTTACAACTTAACTGCTGATGGCAAGTACGTTGTTTATAACCCTGAGT TAGGTTTAATTCAGCAGTTATCTCAACAACCAGAAGGTTACCAAGTTAGCGCGGTTGCTGACTGGGAAAAAATCACTTCA GGTACAGCACCATTTTATGTTGACCCTGCACGCGGTGTACTGCTAAACATCTTCACTAACAAAGCTAGCTTTGAAGACCG TTTAGAAGCCGGTGGCACTATCGGTTACATCATTATTGCTCTGTTAGCACTTGGTTTATTAATCTCTATCGAACGTCTTG TCACTATGACTATCATTGGCGCTCGCGTTAATAGCCAACGTAAGAACGTCGATAAGCCTGGTAACAACGCTTTAGGTCGT ATCTTAAAAGTTTACCAAGAAAACAAAGACGTTGATGTTGAAACGTTAGAGTTGAAACTTGATGAAGCGATTCTGAAAGA AACTCCAGCATTAGAAGCGCGTATTTCAATCATTAAAGTACTGGCCGCTATCGCACCTATGATGGGTCTATTAGGTACAG TAACGGGTATGATTGCAACCTTCCAAAGTATCCAATTATTTGGTACTGGCGATCCAAAACTGATGGCTGGCGGTATTTCT ATGGCGCTTATCACTACAGTTCAAGGTCTGGTTGCTGCTCTGCCGTTAATGTTAATGCATGCAGTGGTTGTTGCCCGTAG TAAGTCAATCGTTCAGATCCTTGAAGAGCAAAGCGCTGGTATTATCGCAGCACATGCTGAGAAGAGGGCTGACTAA
Upstream 100 bases:
>100_bases GCTATTTGCGTGAACTGACTAAAGGTATCCGCATTGCCCGTAAACAAGGTGCTCTAGATCTATTTGCGTTACCAATTCCT GCTGCGGAGACTGCACAATA
Downstream 100 bases:
>100_bases TGACGCTATACCTGATGGACATTTGGGATTCCGTCAGGGGCTTCATGGCCTCCGGAGGCGACGTCCTCTGGCTTGTAGCG GGTGTTCTGTTCTTAATGTG
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel Family Protein; NB System Biopolymer Transport Component; Biopolymer Transport ExbB Protein; Transporter MotA/lQ/ExbB Proton Channel Family Protein; NB System Transport; LQ Protein; Biopolymer Transport Proteins-Like; Outer Membrane Transport Energization Protein ExbB; Transporter Proton Channel Domain Containing Protein; Transporter MotA/lQ/ExbB Proton Channel Family; L Protein; ATPase; Biopolymer Transport Protein lR; Mota/lq/Exbb Proton Channel; Adventurous Gliding Motility Protein R; Biopolymer Transport Protein ExbB; Biopolymer Transport; MotA/lQ/ExbB Proton Channel Family Domain Protein; Mota/lq/Exbb Proton Channel Family Protein; ExbB-Like Biopolymer Transport; Biopolymer Transport Protein ExbB-Related Protein; Ligand Gated Channel Protein lQ; Biopolymer Transport Proteinexbb-Related Protein; Transport Protein lQ; LOW QUALITY PROTEIN Biopolymer Transport ExbB Protein; Biopolymer Transport Protein ExbB-Like Protein; Biopolymer Transport Protein ExbB-Like; L R/Q Protein; MotA/lQ/ExbB Proton Channel Protein
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MKKLITTAVLAASFSLTAGMASAADAPKSIDQLLQQVKVERAAEGKINSKREQEFQAERGDKAALLKREKDALAAEKQRG KDLNQAFLDNERKIAQLEEDLKTAQGDLGEMFGVVKGEAGDFAGKLASSNISAQYPNRDKFIADLGARKQLPKIEELEQF WQEQLFEMAESGKVVKFEGSVTGIDGSVKTTTIHRVGAYNLTADGKYVVYNPELGLIQQLSQQPEGYQVSAVADWEKITS GTAPFYVDPARGVLLNIFTNKASFEDRLEAGGTIGYIIIALLALGLLISIERLVTMTIIGARVNSQRKNVDKPGNNALGR ILKVYQENKDVDVETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGIS MALITTVQGLVAALPLMLMHAVVVARSKSIVQILEEQSAGIIAAHAEKRAD
Sequences:
>Translated_451_residues MKKLITTAVLAASFSLTAGMASAADAPKSIDQLLQQVKVERAAEGKINSKREQEFQAERGDKAALLKREKDALAAEKQRG KDLNQAFLDNERKIAQLEEDLKTAQGDLGEMFGVVKGEAGDFAGKLASSNISAQYPNRDKFIADLGARKQLPKIEELEQF WQEQLFEMAESGKVVKFEGSVTGIDGSVKTTTIHRVGAYNLTADGKYVVYNPELGLIQQLSQQPEGYQVSAVADWEKITS GTAPFYVDPARGVLLNIFTNKASFEDRLEAGGTIGYIIIALLALGLLISIERLVTMTIIGARVNSQRKNVDKPGNNALGR ILKVYQENKDVDVETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGIS MALITTVQGLVAALPLMLMHAVVVARSKSIVQILEEQSAGIIAAHAEKRAD >Mature_451_residues MKKLITTAVLAASFSLTAGMASAADAPKSIDQLLQQVKVERAAEGKINSKREQEFQAERGDKAALLKREKDALAAEKQRG KDLNQAFLDNERKIAQLEEDLKTAQGDLGEMFGVVKGEAGDFAGKLASSNISAQYPNRDKFIADLGARKQLPKIEELEQF WQEQLFEMAESGKVVKFEGSVTGIDGSVKTTTIHRVGAYNLTADGKYVVYNPELGLIQQLSQQPEGYQVSAVADWEKITS GTAPFYVDPARGVLLNIFTNKASFEDRLEAGGTIGYIIIALLALGLLISIERLVTMTIIGARVNSQRKNVDKPGNNALGR ILKVYQENKDVDVETLELKLDEAILKETPALEARISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGIS MALITTVQGLVAALPLMLMHAVVVARSKSIVQILEEQSAGIIAAHAEKRAD
Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. Protects Exbd From Proteolytic Degradation And Functionally Stabilizes Tonb. [C]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48714; Mature: 48714
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLITTAVLAASFSLTAGMASAADAPKSIDQLLQQVKVERAAEGKINSKREQEFQAERG CCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC DKAALLKREKDALAAEKQRGKDLNQAFLDNERKIAQLEEDLKTAQGDLGEMFGVVKGEAG CHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCC DFAGKLASSNISAQYPNRDKFIADLGARKQLPKIEELEQFWQEQLFEMAESGKVVKFEGS HHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCC VTGIDGSVKTTTIHRVGAYNLTADGKYVVYNPELGLIQQLSQQPEGYQVSAVADWEKITS EECCCCCCEEEEEEECCCEEEECCCEEEEECCCHHHHHHHHCCCCCEEEEEECCHHHHCC GTAPFYVDPARGVLLNIFTNKASFEDRLEAGGTIGYIIIALLALGLLISIERLVTMTIIG CCCCEEECCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARVNSQRKNVDKPGNNALGRILKVYQENKDVDVETLELKLDEAILKETPALEARISIIKV HHHCCHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHH LAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGISMALITTVQGLVAALPLMLMH HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH AVVVARSKSIVQILEEQSAGIIAAHAEKRAD HHHHHCCHHHHHHHHHCCCCEEEECCCCCCC >Mature Secondary Structure MKKLITTAVLAASFSLTAGMASAADAPKSIDQLLQQVKVERAAEGKINSKREQEFQAERG CCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC DKAALLKREKDALAAEKQRGKDLNQAFLDNERKIAQLEEDLKTAQGDLGEMFGVVKGEAG CHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCC DFAGKLASSNISAQYPNRDKFIADLGARKQLPKIEELEQFWQEQLFEMAESGKVVKFEGS HHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCC VTGIDGSVKTTTIHRVGAYNLTADGKYVVYNPELGLIQQLSQQPEGYQVSAVADWEKITS EECCCCCCEEEEEEECCCEEEECCCEEEEECCCHHHHHHHHCCCCCEEEEEECCHHHHCC GTAPFYVDPARGVLLNIFTNKASFEDRLEAGGTIGYIIIALLALGLLISIERLVTMTIIG CCCCEEECCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARVNSQRKNVDKPGNNALGRILKVYQENKDVDVETLELKLDEAILKETPALEARISIIKV HHHCCHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHH LAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGISMALITTVQGLVAALPLMLMH HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH AVVVARSKSIVQILEEQSAGIIAAHAEKRAD HHHHHCCHHHHHHHHHCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA