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The map label for this gene is cirA [H]

Identifier: 160874776

GI number: 160874776

Start: 2005240

End: 2008047

Strand: Direct

Name: cirA [H]

Synonym: Sbal195_1659

Alternate gene names: 160874776

Gene position: 2005240-2008047 (Clockwise)

Preceding gene: 160874775

Following gene: 160874779

Centisome position: 37.5

GC content: 41.13

Gene sequence:

>2808_bases
ATGTATAAGAACAACTTCTTAGCAAACTCAGTTCGCTTTGCTTTAATTGGTGGTGTCACAGTTGCTGCTTTAAACGCGCC
AGTCGCAGTTGCTGCTGATGATGGAGCTAAAAAAGTAGAACGTATTGAAGTAACGGGTTCTCGTATCAAACGAACGGATA
TGGAAGCGGCTAGTCCAGTTTTAGTGATGAATCGTGAAGAGCTTGAAGCAACTGGTATGATCAGTATTGGTGATATCTTA
CAAACCATTCCAGCTGCGGGTTCTGCGCTAAATACTTCATTCAACAACGGCGGTGATGGTTCAACTAACATGGACCTACG
TAACCTAGGAGCTCAACGCTTATTGGTGCTTGTCAATGGCAAGCGCTGGATCTCCTCTTTAGGTTCAACAGTCGACTTAA
ATACCATTCCTACATCTGCAATCGAACGCATTGAAGTCCTTAAAGACGGTGCTTCAGCTGTTTATGGTTCGGATGCTATT
GCTGGTGTAATTAACATCATCACACGCAAGAATTTTGAAGGCGTTGAAGTTTCAGTTTATGGTGGCCAAAACGCAAAATA
CGATGATGGCCGTCAATATACTGCAGATATTACCTTTGGCTCTGTATCTGAGAAAGGTGGCTTGTTATTCAATATGAGTC
ATGTCACTCAGCAACCAATTTGGGCTGGCGATAGGGATATATCAGCAACGGGTTATAGCTCAACGGCTGATAATACACGT
ATTCGAGTTAAAGGTTCACAGATGAACCAAGCCAACCAAGATGCATTAGCTGCTGTGGGTTCACCAAACTCATCTGGCAT
ATATGATTTTATGGCGAAGGAAGGTACTGGTGTTAACGTAGGTGTTGATCAATTACGTCCGCGTACTGGTAGCGATGTAT
ATAACTATGCACCTGATAATTATCTATCAACACCTCAAAATCGTAATTCTTTCTATGTACAAGGTTTTTATGATATTTCA
GACAATTTAAGAGTTGTTTCTGACTTTATGATGACCAACCGTAAGTCGTCTCAAGAATTAGCACCTATGCCGTTAACGTT
AGGTGCATCATTCGGTGCCGCAGCGAGTCGTGTTGATATTGGTGCAAATAATATTTACAACCCATTTGGTGAAACGCTAT
ATGGCGATAGCGCTCGTGCAGCCGCAAACGGCCAAGCAGGATATGTACCTTATGCATTACAGCGTCGTATGATTGAAGCT
GGCTCACGTCAATATAATCAAAATGACACAACCTATCGTGCAATGATCGGCTTAGAAGGCAATATTAACGATAACTGGAC
GTGGAGTGCTAACTACATTTATGGTCAAAATAATCAAGATGTACTAACAACTGGTCTTTTAAACTTAACGCGTATTAATC
AAGCACTTAGCGATAACTGCGACGCAAGCAATGGTTGTGTAGCATTAAATCTATTTGGTGGACCAGGCACCGTGACGCAA
GATATGGTTGATTACATTACTTTTGATAGTGTTAGCCGTTCTGGTTTAACGATGAAAGATTATGCGTTCAACATCTCTGG
TGACTTATTCGATTTGCCAGCAGGTTCTGTTGGTATGGCTGTTGGTTTAGAGCGCCGTGAAGAATCTGGTTTTGATGTTC
CAGATCCACTAACTGTTACAGGTGAGTCGTCAGGTAACCAACGTGACGCAACTGCGGGTGGTTTCCGTTTAGATGAAGCG
TATGTTGAGTTATCAGTCCCTGTGTTAGAAAGTTTATTAATTACGCCTGCAATACGTGTATCTGACCATGATGCGTATGG
TAACAATACTACTGGGAAAGTAGGTGTTGAATATCGTCCAATGGACGATATGTTGCTTCGTGGTACCTGGGCTCAGGGCT
ATCGTGCACCATCTATTTCAGATCTTTATGCAGGTAATGCAGACTCTTATCCAACATGGACAGATCCATGTAATACTCCC
TCAAGTGGAACGATTGACCTAGTACAAAACCCAGGCTGTGCGGGTGTACCTGATGGCTATAAACAAGCAAATACGCAGAT
TCGAATTTCTCAGGTTTCGTCACCTGATCTGAAACCTGAAACTTCAGAATCTTATACATATGGCGCAGTGTATAATCCAT
CATGGCTTGAAGGTGCAGAGCTAACTCTTGATTACTATAATATTAAGGTAAAAGATGCGATTGGTCGTTATGGACATACA
ACGATTGCAAGAGAGTGTGCTAAAGGTACTAATCCTGATTCATGTAATTATATTGACCGTGATAGCTTAGGTAACATTAC
TGACCTGCGTAACTTCCTGCAAAATGCCGGTGAATATAATGTTGAAGGAGTTGACTTCTTTACTGCTTATCGTTTCCCTG
AAACCTCATTTGGTTCATTTAAAGCATCTCTGGATGTAGCTTATGTTATTTCAAATGAATTTAATGGTACTGATCGTGTA
GGAGTTCAAACTGGTGATGGCGGTTTCCCTGAGTTTAAGGGCAACTTAATGGTTGATTGGTCGATGGGTGATTGGGATGC
GCATTGGAAAGTGCGTTATGTTGGCCCATTGAATAATGATTATTATACAGGTTTAACGCCTGATGATATCGATTATTATA
ACGACCTTAAAGATTCTGGCTATAGAGAGACGATGGATGCTTATATGGTCCATAACGTATCAGTTGGTTACAATATTGAT
GGCTACAATACCAAAATTTCTTTAGGTATTAATAACCTATTCGCTAAAAAACCACAGGCTGAAGGTCCAACTAACAACGA
AGCCATTTCAACGAATAACTTCTCTGTTACTGAATATGATGTAAATATGGATCGTTTCATCTACTTGCGCGCTACTACTA
AGTTCTAA

Upstream 100 bases:

>100_bases
CATGTTGCTTTTTTTGTTAATTATAAGGCAGACTTAACACCTAACTACCTTTATAGCAAGGTAGAAAATAAAAAATAATG
ATTATCCAGGGAGATAGACA

Downstream 100 bases:

>100_bases
TGTTAAGCACATAAATCGAAAGCCGAGCTTTAAACCGCTCGGCTTTTTACATTTAAATAAATTGCTATTTATTTTTGGTT
AATGCAAATGGAGCTACTAC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 935; Mature: 935

Protein sequence:

>935_residues
MYKNNFLANSVRFALIGGVTVAALNAPVAVAADDGAKKVERIEVTGSRIKRTDMEAASPVLVMNREELEATGMISIGDIL
QTIPAAGSALNTSFNNGGDGSTNMDLRNLGAQRLLVLVNGKRWISSLGSTVDLNTIPTSAIERIEVLKDGASAVYGSDAI
AGVINIITRKNFEGVEVSVYGGQNAKYDDGRQYTADITFGSVSEKGGLLFNMSHVTQQPIWAGDRDISATGYSSTADNTR
IRVKGSQMNQANQDALAAVGSPNSSGIYDFMAKEGTGVNVGVDQLRPRTGSDVYNYAPDNYLSTPQNRNSFYVQGFYDIS
DNLRVVSDFMMTNRKSSQELAPMPLTLGASFGAAASRVDIGANNIYNPFGETLYGDSARAAANGQAGYVPYALQRRMIEA
GSRQYNQNDTTYRAMIGLEGNINDNWTWSANYIYGQNNQDVLTTGLLNLTRINQALSDNCDASNGCVALNLFGGPGTVTQ
DMVDYITFDSVSRSGLTMKDYAFNISGDLFDLPAGSVGMAVGLERREESGFDVPDPLTVTGESSGNQRDATAGGFRLDEA
YVELSVPVLESLLITPAIRVSDHDAYGNNTTGKVGVEYRPMDDMLLRGTWAQGYRAPSISDLYAGNADSYPTWTDPCNTP
SSGTIDLVQNPGCAGVPDGYKQANTQIRISQVSSPDLKPETSESYTYGAVYNPSWLEGAELTLDYYNIKVKDAIGRYGHT
TIARECAKGTNPDSCNYIDRDSLGNITDLRNFLQNAGEYNVEGVDFFTAYRFPETSFGSFKASLDVAYVISNEFNGTDRV
GVQTGDGGFPEFKGNLMVDWSMGDWDAHWKVRYVGPLNNDYYTGLTPDDIDYYNDLKDSGYRETMDAYMVHNVSVGYNID
GYNTKISLGINNLFAKKPQAEGPTNNEAISTNNFSVTEYDVNMDRFIYLRATTKF

Sequences:

>Translated_935_residues
MYKNNFLANSVRFALIGGVTVAALNAPVAVAADDGAKKVERIEVTGSRIKRTDMEAASPVLVMNREELEATGMISIGDIL
QTIPAAGSALNTSFNNGGDGSTNMDLRNLGAQRLLVLVNGKRWISSLGSTVDLNTIPTSAIERIEVLKDGASAVYGSDAI
AGVINIITRKNFEGVEVSVYGGQNAKYDDGRQYTADITFGSVSEKGGLLFNMSHVTQQPIWAGDRDISATGYSSTADNTR
IRVKGSQMNQANQDALAAVGSPNSSGIYDFMAKEGTGVNVGVDQLRPRTGSDVYNYAPDNYLSTPQNRNSFYVQGFYDIS
DNLRVVSDFMMTNRKSSQELAPMPLTLGASFGAAASRVDIGANNIYNPFGETLYGDSARAAANGQAGYVPYALQRRMIEA
GSRQYNQNDTTYRAMIGLEGNINDNWTWSANYIYGQNNQDVLTTGLLNLTRINQALSDNCDASNGCVALNLFGGPGTVTQ
DMVDYITFDSVSRSGLTMKDYAFNISGDLFDLPAGSVGMAVGLERREESGFDVPDPLTVTGESSGNQRDATAGGFRLDEA
YVELSVPVLESLLITPAIRVSDHDAYGNNTTGKVGVEYRPMDDMLLRGTWAQGYRAPSISDLYAGNADSYPTWTDPCNTP
SSGTIDLVQNPGCAGVPDGYKQANTQIRISQVSSPDLKPETSESYTYGAVYNPSWLEGAELTLDYYNIKVKDAIGRYGHT
TIARECAKGTNPDSCNYIDRDSLGNITDLRNFLQNAGEYNVEGVDFFTAYRFPETSFGSFKASLDVAYVISNEFNGTDRV
GVQTGDGGFPEFKGNLMVDWSMGDWDAHWKVRYVGPLNNDYYTGLTPDDIDYYNDLKDSGYRETMDAYMVHNVSVGYNID
GYNTKISLGINNLFAKKPQAEGPTNNEAISTNNFSVTEYDVNMDRFIYLRATTKF
>Mature_935_residues
MYKNNFLANSVRFALIGGVTVAALNAPVAVAADDGAKKVERIEVTGSRIKRTDMEAASPVLVMNREELEATGMISIGDIL
QTIPAAGSALNTSFNNGGDGSTNMDLRNLGAQRLLVLVNGKRWISSLGSTVDLNTIPTSAIERIEVLKDGASAVYGSDAI
AGVINIITRKNFEGVEVSVYGGQNAKYDDGRQYTADITFGSVSEKGGLLFNMSHVTQQPIWAGDRDISATGYSSTADNTR
IRVKGSQMNQANQDALAAVGSPNSSGIYDFMAKEGTGVNVGVDQLRPRTGSDVYNYAPDNYLSTPQNRNSFYVQGFYDIS
DNLRVVSDFMMTNRKSSQELAPMPLTLGASFGAAASRVDIGANNIYNPFGETLYGDSARAAANGQAGYVPYALQRRMIEA
GSRQYNQNDTTYRAMIGLEGNINDNWTWSANYIYGQNNQDVLTTGLLNLTRINQALSDNCDASNGCVALNLFGGPGTVTQ
DMVDYITFDSVSRSGLTMKDYAFNISGDLFDLPAGSVGMAVGLERREESGFDVPDPLTVTGESSGNQRDATAGGFRLDEA
YVELSVPVLESLLITPAIRVSDHDAYGNNTTGKVGVEYRPMDDMLLRGTWAQGYRAPSISDLYAGNADSYPTWTDPCNTP
SSGTIDLVQNPGCAGVPDGYKQANTQIRISQVSSPDLKPETSESYTYGAVYNPSWLEGAELTLDYYNIKVKDAIGRYGHT
TIARECAKGTNPDSCNYIDRDSLGNITDLRNFLQNAGEYNVEGVDFFTAYRFPETSFGSFKASLDVAYVISNEFNGTDRV
GVQTGDGGFPEFKGNLMVDWSMGDWDAHWKVRYVGPLNNDYYTGLTPDDIDYYNDLKDSGYRETMDAYMVHNVSVGYNID
GYNTKISLGINNLFAKKPQAEGPTNNEAISTNNFSVTEYDVNMDRFIYLRATTKF

Specific function: Not yet known. Postulated to participate in iron transport. Outer membrane receptor for colicins IA and IB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=160, Percent_Identity=33.75, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1790405, Length=169, Percent_Identity=30.1775147928994, Blast_Score=83, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 101599; Mature: 101599

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKNNFLANSVRFALIGGVTVAALNAPVAVAADDGAKKVERIEVTGSRIKRTDMEAASPV
CCCCCEECCCEEEEEECCEEEEEECCCEEEEECCCCCCEEEEEECCCHHHHCCHHHCCCE
LVMNREELEATGMISIGDILQTIPAAGSALNTSFNNGGDGSTNMDLRNLGAQRLLVLVNG
EEEEHHHHHHCCCEEHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHCCCEEEEEEECC
KRWISSLGSTVDLNTIPTSAIERIEVLKDGASAVYGSDAIAGVINIITRKNFEGVEVSVY
HHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCEEEEEE
GGQNAKYDDGRQYTADITFGSVSEKGGLLFNMSHVTQQPIWAGDRDISATGYSSTADNTR
CCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCE
IRVKGSQMNQANQDALAAVGSPNSSGIYDFMAKEGTGVNVGVDQLRPRTGSDVYNYAPDN
EEEECCCCCCCCCCCEEEECCCCCCCEEEHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCC
YLSTPQNRNSFYVQGFYDISDNLRVVSDFMMTNRKSSQELAPMPLTLGASFGAAASRVDI
CCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEC
GANNIYNPFGETLYGDSARAAANGQAGYVPYALQRRMIEAGSRQYNQNDTTYRAMIGLEG
CCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECC
NINDNWTWSANYIYGQNNQDVLTTGLLNLTRINQALSDNCDASNGCVALNLFGGPGTVTQ
CCCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHH
DMVDYITFDSVSRSGLTMKDYAFNISGDLFDLPAGSVGMAVGLERREESGFDVPDPLTVT
HHHHHHHHCCCCCCCCEEEHEEEECCCCEEECCCCCCEEEECCCHHHCCCCCCCCCEEEE
GESSGNQRDATAGGFRLDEAYVELSVPVLESLLITPAIRVSDHDAYGNNTTGKVGVEYRP
CCCCCCCCCCCCCCEEEECEEEEEEHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEECC
MDDMLLRGTWAQGYRAPSISDLYAGNADSYPTWTDPCNTPSSGTIDLVQNPGCAGVPDGY
CHHHEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCH
KQANTQIRISQVSSPDLKPETSESYTYGAVYNPSWLEGAELTLDYYNIKVKDAIGRYGHT
HHCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEHHHHCCCCCH
TIARECAKGTNPDSCNYIDRDSLGNITDLRNFLQNAGEYNVEGVDFFTAYRFPETSFGSF
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCE
KASLDVAYVISNEFNGTDRVGVQTGDGGFPEFKGNLMVDWSMGDWDAHWKVRYVGPLNND
EECEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCC
YYTGLTPDDIDYYNDLKDSGYRETMDAYMVHNVSVGYNIDGYNTKISLGINNLFAKKPQA
EECCCCCCCCHHHHHHCCCCCHHHHHEEEEEEEEEEEEECCCCEEEEEEHHHHHCCCCCC
EGPTNNEAISTNNFSVTEYDVNMDRFIYLRATTKF
CCCCCCCEEECCCCEEEEEECCCCEEEEEEEECCC
>Mature Secondary Structure
MYKNNFLANSVRFALIGGVTVAALNAPVAVAADDGAKKVERIEVTGSRIKRTDMEAASPV
CCCCCEECCCEEEEEECCEEEEEECCCEEEEECCCCCCEEEEEECCCHHHHCCHHHCCCE
LVMNREELEATGMISIGDILQTIPAAGSALNTSFNNGGDGSTNMDLRNLGAQRLLVLVNG
EEEEHHHHHHCCCEEHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHCCCEEEEEEECC
KRWISSLGSTVDLNTIPTSAIERIEVLKDGASAVYGSDAIAGVINIITRKNFEGVEVSVY
HHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCEEEEEE
GGQNAKYDDGRQYTADITFGSVSEKGGLLFNMSHVTQQPIWAGDRDISATGYSSTADNTR
CCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCE
IRVKGSQMNQANQDALAAVGSPNSSGIYDFMAKEGTGVNVGVDQLRPRTGSDVYNYAPDN
EEEECCCCCCCCCCCEEEECCCCCCCEEEHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCC
YLSTPQNRNSFYVQGFYDISDNLRVVSDFMMTNRKSSQELAPMPLTLGASFGAAASRVDI
CCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCEEEC
GANNIYNPFGETLYGDSARAAANGQAGYVPYALQRRMIEAGSRQYNQNDTTYRAMIGLEG
CCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECC
NINDNWTWSANYIYGQNNQDVLTTGLLNLTRINQALSDNCDASNGCVALNLFGGPGTVTQ
CCCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHH
DMVDYITFDSVSRSGLTMKDYAFNISGDLFDLPAGSVGMAVGLERREESGFDVPDPLTVT
HHHHHHHHCCCCCCCCEEEHEEEECCCCEEECCCCCCEEEECCCHHHCCCCCCCCCEEEE
GESSGNQRDATAGGFRLDEAYVELSVPVLESLLITPAIRVSDHDAYGNNTTGKVGVEYRP
CCCCCCCCCCCCCCEEEECEEEEEEHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEECC
MDDMLLRGTWAQGYRAPSISDLYAGNADSYPTWTDPCNTPSSGTIDLVQNPGCAGVPDGY
CHHHEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCH
KQANTQIRISQVSSPDLKPETSESYTYGAVYNPSWLEGAELTLDYYNIKVKDAIGRYGHT
HHCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEHHHHCCCCCH
TIARECAKGTNPDSCNYIDRDSLGNITDLRNFLQNAGEYNVEGVDFFTAYRFPETSFGSF
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCE
KASLDVAYVISNEFNGTDRVGVQTGDGGFPEFKGNLMVDWSMGDWDAHWKVRYVGPLNND
EECEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCC
YYTGLTPDDIDYYNDLKDSGYRETMDAYMVHNVSVGYNIDGYNTKISLGINNLFAKKPQA
EECCCCCCCCHHHHHHCCCCCHHHHHEEEEEEEEEEEEECCCCEEEEEEHHHHHCCCCCC
EGPTNNEAISTNNFSVTEYDVNMDRFIYLRATTKF
CCCCCCCEEECCCCEEEEEECCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2644220; 9278503; 3316180; 1315732; 2160948 [H]