| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874663
Identifier: 160874663
GI number: 160874663
Start: 1865023
End: 1865880
Strand: Reverse
Name: 160874663
Synonym: Sbal195_1546
Alternate gene names: NA
Gene position: 1865880-1865023 (Counterclockwise)
Preceding gene: 160874671
Following gene: 160874662
Centisome position: 34.89
GC content: 51.52
Gene sequence:
>858_bases ATGAAGATCAAAAAAGCCCTCATGCTCTTGGGTCTGTTAGCTGTCAGCCCAGCGACATTAGCTGCAACCGGAGTTGCCTT TATCCATGGTACGGGTCACCAGACCAATGCCTTAGCCGATTACTGGACGCCCGAATTTGTTAACTCAGTGCGCCAAGGCA TCCCAGTACCAAATAATTACACAGTGATCAACTGCGACTTTGACCAATATATGTGGGAAGAAAGCGCTGCAGGTTGTCTG GCGACCCAGCTCAATAGCTTTATCCAAGCCAAAAATATCGACGACTTAATTCTGCTGACCCACTCCAATGGTGGCAACGT AGTGCGGTGGATTTTATCTAACCCCACGTGGGACAGCCGTTATCCTGCGGTGATCAACGCCACCTCAAAGGTTATCGCCC TCGCCCCATCCAGTGCTGGTACGCCGCTCGCCGATGCGGTGAACCAAGGTAATGTGTTCGAAACCAGCTTAGGCTGGCTC TTAGGCTATGGCAGCAATGCGGTGAAACAACAGCAAGTGGGTTGGATGGCAAACTACAACAACACTATGCTCTACGGTAC TGCAGGTCGCCCATCGCTGGGTAAACCCTTCGAAGTCGTGGTGGGCTCAGATGTTGATTCCGCCATTTGGGACAGCGACA GTTACTGCGCAGGTTACCAATACCAAGTGGCGCTCGAAACCACCCAAAACTGGCTTGATAGCTGCTCCGACGGCTTCTTA AATTGCAGCTCGCAAAAGGCAGCTGGCACAGTCTGGTTTACCGATAAACAAAAGACCCGTGGCCAAGAACCCCTAAGTCA TCAGCAGAGCCGCCGTGCGTGTTTCAATTTAGACACGCTGATCCGCAACCACATTTAA
Upstream 100 bases:
>100_bases CTAAATTACGGCAAATCCTTAGCATTAACCGATTTGCCCTAAACAGTCGCAACGGACTGCGCGGCCACTATCAACAAGAC CAACAACACGAGATATACCC
Downstream 100 bases:
>100_bases GGAGCACTAAGATGCACACACTCAGCAAACTTGCCAGTGTCTTGGCGCTAAGCGGACTGCTCGCAGCCTGCCAAGATGAA GCCACACCTATAGATCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKIKKALMLLGLLAVSPATLAATGVAFIHGTGHQTNALADYWTPEFVNSVRQGIPVPNNYTVINCDFDQYMWEESAAGCL ATQLNSFIQAKNIDDLILLTHSNGGNVVRWILSNPTWDSRYPAVINATSKVIALAPSSAGTPLADAVNQGNVFETSLGWL LGYGSNAVKQQQVGWMANYNNTMLYGTAGRPSLGKPFEVVVGSDVDSAIWDSDSYCAGYQYQVALETTQNWLDSCSDGFL NCSSQKAAGTVWFTDKQKTRGQEPLSHQQSRRACFNLDTLIRNHI
Sequences:
>Translated_285_residues MKIKKALMLLGLLAVSPATLAATGVAFIHGTGHQTNALADYWTPEFVNSVRQGIPVPNNYTVINCDFDQYMWEESAAGCL ATQLNSFIQAKNIDDLILLTHSNGGNVVRWILSNPTWDSRYPAVINATSKVIALAPSSAGTPLADAVNQGNVFETSLGWL LGYGSNAVKQQQVGWMANYNNTMLYGTAGRPSLGKPFEVVVGSDVDSAIWDSDSYCAGYQYQVALETTQNWLDSCSDGFL NCSSQKAAGTVWFTDKQKTRGQEPLSHQQSRRACFNLDTLIRNHI >Mature_285_residues MKIKKALMLLGLLAVSPATLAATGVAFIHGTGHQTNALADYWTPEFVNSVRQGIPVPNNYTVINCDFDQYMWEESAAGCL ATQLNSFIQAKNIDDLILLTHSNGGNVVRWILSNPTWDSRYPAVINATSKVIALAPSSAGTPLADAVNQGNVFETSLGWL LGYGSNAVKQQQVGWMANYNNTMLYGTAGRPSLGKPFEVVVGSDVDSAIWDSDSYCAGYQYQVALETTQNWLDSCSDGFL NCSSQKAAGTVWFTDKQKTRGQEPLSHQQSRRACFNLDTLIRNHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31081; Mature: 31081
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKKALMLLGLLAVSPATLAATGVAFIHGTGHQTNALADYWTPEFVNSVRQGIPVPNNY CCHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCCCCHHHCCCHHHHHHHHHCCCCCCCE TVINCDFDQYMWEESAAGCLATQLNSFIQAKNIDDLILLTHSNGGNVVRWILSNPTWDSR EEEEECHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCC YPAVINATSKVIALAPSSAGTPLADAVNQGNVFETSLGWLLGYGSNAVKQQQVGWMANYN CCEEEECCCEEEEECCCCCCCCHHHHCCCCCEEEEHHHHEEECCCCHHHHHHCCEEECCC NTMLYGTAGRPSLGKPFEVVVGSDVDSAIWDSDSYCAGYQYQVALETTQNWLDSCSDGFL CEEEEECCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCE NCSSQKAAGTVWFTDKQKTRGQEPLSHQQSRRACFNLDTLIRNHI ECCCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIKKALMLLGLLAVSPATLAATGVAFIHGTGHQTNALADYWTPEFVNSVRQGIPVPNNY CCHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCCCCHHHCCCHHHHHHHHHCCCCCCCE TVINCDFDQYMWEESAAGCLATQLNSFIQAKNIDDLILLTHSNGGNVVRWILSNPTWDSR EEEEECHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCC YPAVINATSKVIALAPSSAGTPLADAVNQGNVFETSLGWLLGYGSNAVKQQQVGWMANYN CCEEEECCCEEEEECCCCCCCCHHHHCCCCCEEEEHHHHEEECCCCHHHHHHCCEEECCC NTMLYGTAGRPSLGKPFEVVVGSDVDSAIWDSDSYCAGYQYQVALETTQNWLDSCSDGFL CEEEEECCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCE NCSSQKAAGTVWFTDKQKTRGQEPLSHQQSRRACFNLDTLIRNHI ECCCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA