| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874662
Identifier: 160874662
GI number: 160874662
Start: 1863683
End: 1865011
Strand: Reverse
Name: 160874662
Synonym: Sbal195_1545
Alternate gene names: NA
Gene position: 1865011-1863683 (Counterclockwise)
Preceding gene: 160874663
Following gene: 160874661
Centisome position: 34.88
GC content: 52.9
Gene sequence:
>1329_bases ATGCACACACTCAGCAAACTTGCCAGTGTCTTGGCGCTAAGCGGACTGCTCGCAGCCTGCCAAGATGAAGCCACACCTAT AGATCCCAAAACCAATGCTAGCCCTATGTACGCCAAAGGGTTAACCCTAGCCGCGCCGAGCAATACCGACCTTGTCGATA GCAATATTGCCAGTCCAACACTGGCGCCCATTAACACCAGTACGGATTACATTAGCTTTATCACCCCTTTGTATGGCGAG TATCAGGCAAGGGCGCCGCAGCTTGAACAAACCAGCGAAAGTGACGAGTATTGGGTCAATGTAACCGGCGCGCAGCTTAA TGCGGGCGTGAGCCTCACCATGAGCCAAGCGTCGAGCCTAGTGCGCATTGCGCCTCGGGGCGATACCAGTTCTGGCGCCT TAATGCATGCAGAGGCTATCGCCCCTGAGCGCGTACAAATTCAGCGCGTTAGCCCTAATCAGTCACCCCAAGGCAAAGCG GCCAACAGCAGCGGGATAAACACCAATGAGTCATTGGTCAAATCGATGGCCAACGCCGATGCCCTTGCTAGCGCAGGATT AACCGATGATTCCAGCGCACTGCAAATGTCAGCGAAAGCCACACCGGGCCAATATCGCCTGCAGGTCAGTCAGCCGTTAA CGCCAAGCGCCAACTACTTAGTCAATGTGAAGGAAAAAGGCTCGCCCTATCAACTGAGTGTCAAAGCCTCCTCCGCTATC GCGGCTGATGCGCAAACCCTTGGGCTTGAACTCGCACTCAGCCAAAGTGATAACACCTTCGTGCCGCAGGCAACACTCAA GCAAGCCGATGGCGATATGCAACCACTCTTGATGGTAAAACAAGGTGAGACATGGCAAGCGGTGATCCCCGCGGGCGTGG CACTTTCGAGCAGTAATGCGGGTTTCAGTGAAGTTGAAATTACAGTGCAAACCCAAGTCGATGGCCGCCCAGTGCAGCGC ACGGTCAAATCTGTCTTTAAGTCCTATGTCAATTCGGCGAGCATCAAGCCCGAAGTGCTCACGGTTTGGGATAAAGGTTT GCCTAACCAAATCAACTTTGAGTTATCGGTCGCCGAGGCGGGACGTTTTGGCTTAAGTGGCACGTTAACCGGCACCAATG CCGAAGGTCAAAAGGTGGCGATTCTACGTACCCAAGCGGCTAATTGGCTGACCCCAGAGTCGCCAAAGTTAAAGCTGATG TTAGATCCTAAGCTCATCCAAGCCTCGGGTTTACAGCCGCCATTCGAACTCAATGAGTTAGAACTGCAAGATCAAGGTCA AATGGCCAGATTAAGCTATCAAGCCAAAGCATTGATCTTAACCCGCTAA
Upstream 100 bases:
>100_bases AAAAGACCCGTGGCCAAGAACCCCTAAGTCATCAGCAGAGCCGCCGTGCGTGTTTCAATTTAGACACGCTGATCCGCAAC CACATTTAAGGAGCACTAAG
Downstream 100 bases:
>100_bases CATTAGAGGCTGATGTTAAGGGGCTGATATTAAGGAGCAGATAGAAGACGCGGGCTTTAAATGCCAATGTTAAACCAGAG GCGAGGCTCATCTGCTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MHTLSKLASVLALSGLLAACQDEATPIDPKTNASPMYAKGLTLAAPSNTDLVDSNIASPTLAPINTSTDYISFITPLYGE YQARAPQLEQTSESDEYWVNVTGAQLNAGVSLTMSQASSLVRIAPRGDTSSGALMHAEAIAPERVQIQRVSPNQSPQGKA ANSSGINTNESLVKSMANADALASAGLTDDSSALQMSAKATPGQYRLQVSQPLTPSANYLVNVKEKGSPYQLSVKASSAI AADAQTLGLELALSQSDNTFVPQATLKQADGDMQPLLMVKQGETWQAVIPAGVALSSSNAGFSEVEITVQTQVDGRPVQR TVKSVFKSYVNSASIKPEVLTVWDKGLPNQINFELSVAEAGRFGLSGTLTGTNAEGQKVAILRTQAANWLTPESPKLKLM LDPKLIQASGLQPPFELNELELQDQGQMARLSYQAKALILTR
Sequences:
>Translated_442_residues MHTLSKLASVLALSGLLAACQDEATPIDPKTNASPMYAKGLTLAAPSNTDLVDSNIASPTLAPINTSTDYISFITPLYGE YQARAPQLEQTSESDEYWVNVTGAQLNAGVSLTMSQASSLVRIAPRGDTSSGALMHAEAIAPERVQIQRVSPNQSPQGKA ANSSGINTNESLVKSMANADALASAGLTDDSSALQMSAKATPGQYRLQVSQPLTPSANYLVNVKEKGSPYQLSVKASSAI AADAQTLGLELALSQSDNTFVPQATLKQADGDMQPLLMVKQGETWQAVIPAGVALSSSNAGFSEVEITVQTQVDGRPVQR TVKSVFKSYVNSASIKPEVLTVWDKGLPNQINFELSVAEAGRFGLSGTLTGTNAEGQKVAILRTQAANWLTPESPKLKLM LDPKLIQASGLQPPFELNELELQDQGQMARLSYQAKALILTR >Mature_442_residues MHTLSKLASVLALSGLLAACQDEATPIDPKTNASPMYAKGLTLAAPSNTDLVDSNIASPTLAPINTSTDYISFITPLYGE YQARAPQLEQTSESDEYWVNVTGAQLNAGVSLTMSQASSLVRIAPRGDTSSGALMHAEAIAPERVQIQRVSPNQSPQGKA ANSSGINTNESLVKSMANADALASAGLTDDSSALQMSAKATPGQYRLQVSQPLTPSANYLVNVKEKGSPYQLSVKASSAI AADAQTLGLELALSQSDNTFVPQATLKQADGDMQPLLMVKQGETWQAVIPAGVALSSSNAGFSEVEITVQTQVDGRPVQR TVKSVFKSYVNSASIKPEVLTVWDKGLPNQINFELSVAEAGRFGLSGTLTGTNAEGQKVAILRTQAANWLTPESPKLKLM LDPKLIQASGLQPPFELNELELQDQGQMARLSYQAKALILTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46774; Mature: 46774
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTLSKLASVLALSGLLAACQDEATPIDPKTNASPMYAKGLTLAAPSNTDLVDSNIASPT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCE LAPINTSTDYISFITPLYGEYQARAPQLEQTSESDEYWVNVTGAQLNAGVSLTMSQASSL EECCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCEEEEEECCEECCCEEEEECCCCCE VRIAPRGDTSSGALMHAEAIAPERVQIQRVSPNQSPQGKAANSSGINTNESLVKSMANAD EEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCHH ALASAGLTDDSSALQMSAKATPGQYRLQVSQPLTPSANYLVNVKEKGSPYQLSVKASSAI HHHHCCCCCCCHHEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCC AADAQTLGLELALSQSDNTFVPQATLKQADGDMQPLLMVKQGETWQAVIPAGVALSSSNA CCCHHHEEEEEEEECCCCEECCCHHHHHCCCCCCEEEEEECCCCEEEEECCCEEEECCCC GFSEVEITVQTQVDGRPVQRTVKSVFKSYVNSASIKPEVLTVWDKGLPNQINFELSVAEA CCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECC GRFGLSGTLTGTNAEGQKVAILRTQAANWLTPESPKLKLMLDPKLIQASGLQPPFELNEL CCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCE ELQDQGQMARLSYQAKALILTR EECCCCCEEEEEEEEEEEEEEC >Mature Secondary Structure MHTLSKLASVLALSGLLAACQDEATPIDPKTNASPMYAKGLTLAAPSNTDLVDSNIASPT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCE LAPINTSTDYISFITPLYGEYQARAPQLEQTSESDEYWVNVTGAQLNAGVSLTMSQASSL EECCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCEEEEEECCEECCCEEEEECCCCCE VRIAPRGDTSSGALMHAEAIAPERVQIQRVSPNQSPQGKAANSSGINTNESLVKSMANAD EEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCHH ALASAGLTDDSSALQMSAKATPGQYRLQVSQPLTPSANYLVNVKEKGSPYQLSVKASSAI HHHHCCCCCCCHHEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCC AADAQTLGLELALSQSDNTFVPQATLKQADGDMQPLLMVKQGETWQAVIPAGVALSSSNA CCCHHHEEEEEEEECCCCEECCCHHHHHCCCCCCEEEEEECCCCEEEEECCCEEEECCCC GFSEVEITVQTQVDGRPVQRTVKSVFKSYVNSASIKPEVLTVWDKGLPNQINFELSVAEA CCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECC GRFGLSGTLTGTNAEGQKVAILRTQAANWLTPESPKLKLMLDPKLIQASGLQPPFELNEL CCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCE ELQDQGQMARLSYQAKALILTR EECCCCCEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA