Click here to switch to the map view.

The map label for this gene is pbpX [H]

Identifier: 160874671

GI number: 160874671

Start: 1873783

End: 1875015

Strand: Reverse

Name: pbpX [H]

Synonym: Sbal195_1554

Alternate gene names: 160874671

Gene position: 1875015-1873783 (Counterclockwise)

Preceding gene: 160874674

Following gene: 160874663

Centisome position: 35.06

GC content: 49.88

Gene sequence:

>1233_bases
ATGCTCAATATGCTAAATCCGCTACGTAACACGTTGGCTTTATTGATGTTCGGCTGTTGTTATTCGATCGCAGTATCAGC
CGCGACTGCCACACAAGATGATGCGGCGCAAAATGTCAGCATAAGCCGCGTTGAGCACGGGCTTTCCAGCTTAGTGGTTG
CAAAAGGCGCCTCAGCGCAAAAGATGAACCTTGTGGATCGGATGCAATATTATCGGGTGCCTGCGGTCAGTATTGCGGTC
GTCAATAATGGCCGCATTGAATGGGCTCGGGCTTATGGCGTCAATATTGCGGGAAAAGACGGCGCTAACGATGCGCAAAG
CACGACACCAACAACATTATTTCAGGCCGCATCCATCAGTAAATCCCTCACCGCGCTGGCAGCATTGCATCTGGTTGAAC
AAGGAAAACTGCAACTGGACGGTGATATCAATAACCAATTGCACAGCTGGAAGCTGCCTGACAATGAATTTACCAAGGAG
CACAAAGTCAGCCTGCGACAATTGCTTAACCACAGTGGCGGCATCAATGTTCATGGCTTTAAAGGTTATGCCGATGGGCA
GCCTCTGCCCGACTTACTGGCGGTGCTAAACGGTGTTGCCCCGTCCAATACCGATGCGATTCGGGTCGAAGCCGTACCAG
GCAACCAATGGAGCTATTCTGGCGGCGGTTACACTATCGCCCAATTGATGATGATTGAGGCCAGCAAACAGGATTTTCCG
CAATTGCTGCAACAAACCCTCTTTTCTCCTTTAGATATGCAGCACAGTTTCTTCGCACAAACCTTACCAGCCGAAGCGCG
CAGCAATGCCGCAGCAGGACATGATGAAAATGGCGCTGCAATAACTGGGTTGTGGCATCAAAACCCCGAGCTGGCGGCGG
CAGGTCTGTGGACGACGGCGACAGATTTAGCCAAAGTCATCATTGAAGTGCAAAAGTCGGAGGCGGGAACGTCTAATAAA
ATACTCTCAACGGATATGACCAAAACCATGTTAACCCGAGTATTGGGTGAAACCGGCCTTGGCTTTTTTGTTGAACAACT
GCCAGACCGGATAAGCTTTAGCCATAGTGGCGGCAATGAAGGCTTCCGCAGCCAATTATATGGTTATACCCAAACCGGAC
AGGGAGCAGTTGTGCTGACCAACGGCGATAATGGTGCCGCCTTAATAAAGGAAATTCTGGCCAGTATTTCAGCCGAATAT
GACTGGCCAGAATTTAAAGTGACAGAAAAGTAA

Upstream 100 bases:

>100_bases
GTGATGCGCCGCGCTAAATACTGCCGTCTGTTTTGACAAACAAACACCAGCCCCCTGTTTCGCCAAGGATTTTAAACATT
TGATAAAGGACTAAAATCAC

Downstream 100 bases:

>100_bases
GCTGCTTAAATGAGGCATTAAATAACAGCACATTGAGCAGTAATGCGAAGAGAAACAGTACACTGCCAGACGCCAGACTA
AAACCCATTTAGCTGGCGGC

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MLNMLNPLRNTLALLMFGCCYSIAVSAATATQDDAAQNVSISRVEHGLSSLVVAKGASAQKMNLVDRMQYYRVPAVSIAV
VNNGRIEWARAYGVNIAGKDGANDAQSTTPTTLFQAASISKSLTALAALHLVEQGKLQLDGDINNQLHSWKLPDNEFTKE
HKVSLRQLLNHSGGINVHGFKGYADGQPLPDLLAVLNGVAPSNTDAIRVEAVPGNQWSYSGGGYTIAQLMMIEASKQDFP
QLLQQTLFSPLDMQHSFFAQTLPAEARSNAAAGHDENGAAITGLWHQNPELAAAGLWTTATDLAKVIIEVQKSEAGTSNK
ILSTDMTKTMLTRVLGETGLGFFVEQLPDRISFSHSGGNEGFRSQLYGYTQTGQGAVVLTNGDNGAALIKEILASISAEY
DWPEFKVTEK

Sequences:

>Translated_410_residues
MLNMLNPLRNTLALLMFGCCYSIAVSAATATQDDAAQNVSISRVEHGLSSLVVAKGASAQKMNLVDRMQYYRVPAVSIAV
VNNGRIEWARAYGVNIAGKDGANDAQSTTPTTLFQAASISKSLTALAALHLVEQGKLQLDGDINNQLHSWKLPDNEFTKE
HKVSLRQLLNHSGGINVHGFKGYADGQPLPDLLAVLNGVAPSNTDAIRVEAVPGNQWSYSGGGYTIAQLMMIEASKQDFP
QLLQQTLFSPLDMQHSFFAQTLPAEARSNAAAGHDENGAAITGLWHQNPELAAAGLWTTATDLAKVIIEVQKSEAGTSNK
ILSTDMTKTMLTRVLGETGLGFFVEQLPDRISFSHSGGNEGFRSQLYGYTQTGQGAVVLTNGDNGAALIKEILASISAEY
DWPEFKVTEK
>Mature_410_residues
MLNMLNPLRNTLALLMFGCCYSIAVSAATATQDDAAQNVSISRVEHGLSSLVVAKGASAQKMNLVDRMQYYRVPAVSIAV
VNNGRIEWARAYGVNIAGKDGANDAQSTTPTTLFQAASISKSLTALAALHLVEQGKLQLDGDINNQLHSWKLPDNEFTKE
HKVSLRQLLNHSGGINVHGFKGYADGQPLPDLLAVLNGVAPSNTDAIRVEAVPGNQWSYSGGGYTIAQLMMIEASKQDFP
QLLQQTLFSPLDMQHSFFAQTLPAEARSNAAAGHDENGAAITGLWHQNPELAAAGLWTTATDLAKVIIEVQKSEAGTSNK
ILSTDMTKTMLTRVLGETGLGFFVEQLPDRISFSHSGGNEGFRSQLYGYTQTGQGAVVLTNGDNGAALIKEILASISAEY
DWPEFKVTEK

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential). Note=Localizes to the division septum during vegetative growth, and accumulates at the prespore during sporulation [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-lactamase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI115533026, Length=359, Percent_Identity=27.2980501392758, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 44010; Mature: 44010

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNMLNPLRNTLALLMFGCCYSIAVSAATATQDDAAQNVSISRVEHGLSSLVVAKGASAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCH
KMNLVDRMQYYRVPAVSIAVVNNGRIEWARAYGVNIAGKDGANDAQSTTPTTLFQAASIS
HHHHHHHHHHHCCCEEEEEEEECCCEEEEEEECCEECCCCCCCCCCCCCCHHHHHHHHHH
KSLTALAALHLVEQGKLQLDGDINNQLHSWKLPDNEFTKEHKVSLRQLLNHSGGINVHGF
HHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE
KGYADGQPLPDLLAVLNGVAPSNTDAIRVEAVPGNQWSYSGGGYTIAQLMMIEASKQDFP
CCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHH
QLLQQTLFSPLDMQHSFFAQTLPAEARSNAAAGHDENGAAITGLWHQNPELAAAGLWTTA
HHHHHHHCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCHHHCCCHHHH
TDLAKVIIEVQKSEAGTSNKILSTDMTKTMLTRVLGETGLGFFVEQLPDRISFSHSGGNE
HHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCC
GFRSQLYGYTQTGQGAVVLTNGDNGAALIKEILASISAEYDWPEFKVTEK
CHHHHHCCEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCC
>Mature Secondary Structure
MLNMLNPLRNTLALLMFGCCYSIAVSAATATQDDAAQNVSISRVEHGLSSLVVAKGASAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCH
KMNLVDRMQYYRVPAVSIAVVNNGRIEWARAYGVNIAGKDGANDAQSTTPTTLFQAASIS
HHHHHHHHHHHCCCEEEEEEEECCCEEEEEEECCEECCCCCCCCCCCCCCHHHHHHHHHH
KSLTALAALHLVEQGKLQLDGDINNQLHSWKLPDNEFTKEHKVSLRQLLNHSGGINVHGF
HHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE
KGYADGQPLPDLLAVLNGVAPSNTDAIRVEAVPGNQWSYSGGGYTIAQLMMIEASKQDFP
CCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHH
QLLQQTLFSPLDMQHSFFAQTLPAEARSNAAAGHDENGAAITGLWHQNPELAAAGLWTTA
HHHHHHHCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCHHHCCCHHHH
TDLAKVIIEVQKSEAGTSNKILSTDMTKTMLTRVLGETGLGFFVEQLPDRISFSHSGGNE
HHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCC
GFRSQLYGYTQTGQGAVVLTNGDNGAALIKEILASISAEYDWPEFKVTEK
CHHHHHCCEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]