| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is apaG [H]
Identifier: 160874198
GI number: 160874198
Start: 1276184
End: 1276564
Strand: Reverse
Name: apaG [H]
Synonym: Sbal195_1078
Alternate gene names: 160874198
Gene position: 1276564-1276184 (Counterclockwise)
Preceding gene: 160874199
Following gene: 160874197
Centisome position: 23.87
GC content: 49.08
Gene sequence:
>381_bases ATGAGCGCATTGGACACCTCCATTCGGGTTGAAGTTAAAACTGAATATATAGAGCAGCAGTCCTCGCCCGAGGATGAAAA ATACCTCTTCAGCTATACCATCACTATCATCAATTTAGGTGAGCAGGCGGCTAAACTCGAAACCCGTCACTGGATAATCA CAGATGCCAATGGCAATACCAGTGAAGTCCAAGGCGCCGGAGTTGTCGGTGAAACACCAACCATAGCGCCAAATACCGCC TATCAATACACCAGTGGCACAGTGCTCGATACCCCCCTTGGCATAATGCATGGCACTTATGGTATGGTCAGCGAATCGGG TGAGCATTTCCAAGCGACGATCCGTCCCTTCCGTTTAACGACCCCAGGCTTACTACATTAA
Upstream 100 bases:
>100_bases CGTGCAACAGTATGTTGCTATGGCTAACATGGTTTGCGATAAGAAAGCATAAATATGTCTGGGCACTTAGGTGCCCTTTA ACCAGAGCCTAGGAACAAGA
Downstream 100 bases:
>100_bases TATCGTTAGGAAAGGGGTACTGTGGCGCATTATTTTGTTGGTGATATTCAAGGCTGTTTCGCTGAATTACAAAAATTACT CGCTAAGGTCGATTTTAATC
Product: ApaG protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSALDTSIRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGNTSEVQGAGVVGETPTIAPNTA YQYTSGTVLDTPLGIMHGTYGMVSESGEHFQATIRPFRLTTPGLLH
Sequences:
>Translated_126_residues MSALDTSIRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGNTSEVQGAGVVGETPTIAPNTA YQYTSGTVLDTPLGIMHGTYGMVSESGEHFQATIRPFRLTTPGLLH >Mature_125_residues SALDTSIRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGNTSEVQGAGVVGETPTIAPNTAY QYTSGTVLDTPLGIMHGTYGMVSESGEHFQATIRPFRLTTPGLLH
Specific function: Unknown
COG id: COG2967
COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 apaG domain [H]
Homologues:
Organism=Homo sapiens, GI15812186, Length=121, Percent_Identity=38.8429752066116, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI15812188, Length=121, Percent_Identity=38.8429752066116, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI7661672, Length=128, Percent_Identity=33.59375, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1786235, Length=119, Percent_Identity=51.2605042016807, Blast_Score=132, Evalue=5e-33, Organism=Drosophila melanogaster, GI21356905, Length=114, Percent_Identity=36.8421052631579, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI24644238, Length=114, Percent_Identity=36.8421052631579, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007474 - InterPro: IPR023065 [H]
Pfam domain/function: PF04379 DUF525 [H]
EC number: NA
Molecular weight: Translated: 13808; Mature: 13676
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS51087 APAG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALDTSIRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGNT CCCCCCEEEEEEEEHHHHCCCCCCCCEEEEEEEEEEEECCCHHHEECCCEEEEECCCCCC SEVQGAGVVGETPTIAPNTAYQYTSGTVLDTPLGIMHGTYGMVSESGEHFQATIRPFRLT CCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCHHHCCCCCCCCCCCCEEEEEECEEEEC TPGLLH CCCCCC >Mature Secondary Structure SALDTSIRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGNT CCCCCEEEEEEEEHHHHCCCCCCCCEEEEEEEEEEEECCCHHHEECCCEEEEECCCCCC SEVQGAGVVGETPTIAPNTAYQYTSGTVLDTPLGIMHGTYGMVSESGEHFQATIRPFRLT CCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCHHHCCCCCCCCCCCCEEEEEECEEEEC TPGLLH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA