| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is apaH [H]
Identifier: 160874197
GI number: 160874197
Start: 1275338
End: 1276162
Strand: Reverse
Name: apaH [H]
Synonym: Sbal195_1077
Alternate gene names: 160874197
Gene position: 1276162-1275338 (Counterclockwise)
Preceding gene: 160874198
Following gene: 160874196
Centisome position: 23.87
GC content: 45.21
Gene sequence:
>825_bases GTGGCGCATTATTTTGTTGGTGATATTCAAGGCTGTTTCGCTGAATTACAAAAATTACTCGCTAAGGTCGATTTTAATCC CTCCCGTGATGAACTCTGGGCTGTAGGTGATCTTGTTGCTCGCGGACCAGATTCCTTAGCTACACTACGTTTTTTTCGTT CTTTAGGTGATTCCGCTAAAACGGTTTTAGGCAATCACGATCTCCACTTAATGGCGTTACACGGCAAGCTCAAACGCGCT AAGCCCAGCGATAATTTAACTGAAATTCTTGAATCGCCCGATATTTCAGCCTCAATTGATTGGCTGAGACAGCAACCCCT AATGCGTGAATTACCCGAACACCAACTCATCATGAGTCATGCGGGTGTGCCACCGCAGTGGTCGCTTGAAGTATTAAGAG AAGAAGCCGCACTCGTCAGTTGCGCACTCAAACAAGATGATTATCTTGAGGCACTGATAAGCCAAATGTATTCGGATAGT GCCGAACAATGGGACCCAAGTGCAATTGGCATAGAGCGCCTACGTTACTGCATCAACGCATTAACACGCATGCGCTACCT CTATGTCGATGGCCGACTCGATTTTGATTGTAAACAACCTCCTGAAAACTGTACTAATCCACAACTCAAACCTTGGTTTG AGTTTGCTTCGCCCCTGCGCCAGAGCCACACCTTGGTTTTCGGCCATTGGGCAGCACTGATGGGCAATGTCGGCGATAGT AAATTAAAGGCTTTAGATACAGGTTGTTGCTGGGGTGAACACTTAACCCTATGGCATCTTGAAAAAGACCAAAAAATTAC GCAAAAAAAGTTAAAAAAGAGTTAA
Upstream 100 bases:
>100_bases TATGGTCAGCGAATCGGGTGAGCATTTCCAAGCGACGATCCGTCCCTTCCGTTTAACGACCCCAGGCTTACTACATTAAT ATCGTTAGGAAAGGGGTACT
Downstream 100 bases:
>100_bases ACTAAAACAGCTTAAAGTCGATAACAGACTGAGCCGCCTAACCCTGAAATCGCCCTGTTTTCATTTGGAAAAATATAATA AAAATCGGAGTATCCTATGA
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MAHYFVGDIQGCFAELQKLLAKVDFNPSRDELWAVGDLVARGPDSLATLRFFRSLGDSAKTVLGNHDLHLMALHGKLKRA KPSDNLTEILESPDISASIDWLRQQPLMRELPEHQLIMSHAGVPPQWSLEVLREEAALVSCALKQDDYLEALISQMYSDS AEQWDPSAIGIERLRYCINALTRMRYLYVDGRLDFDCKQPPENCTNPQLKPWFEFASPLRQSHTLVFGHWAALMGNVGDS KLKALDTGCCWGEHLTLWHLEKDQKITQKKLKKS
Sequences:
>Translated_274_residues MAHYFVGDIQGCFAELQKLLAKVDFNPSRDELWAVGDLVARGPDSLATLRFFRSLGDSAKTVLGNHDLHLMALHGKLKRA KPSDNLTEILESPDISASIDWLRQQPLMRELPEHQLIMSHAGVPPQWSLEVLREEAALVSCALKQDDYLEALISQMYSDS AEQWDPSAIGIERLRYCINALTRMRYLYVDGRLDFDCKQPPENCTNPQLKPWFEFASPLRQSHTLVFGHWAALMGNVGDS KLKALDTGCCWGEHLTLWHLEKDQKITQKKLKKS >Mature_273_residues AHYFVGDIQGCFAELQKLLAKVDFNPSRDELWAVGDLVARGPDSLATLRFFRSLGDSAKTVLGNHDLHLMALHGKLKRAK PSDNLTEILESPDISASIDWLRQQPLMRELPEHQLIMSHAGVPPQWSLEVLREEAALVSCALKQDDYLEALISQMYSDSA EQWDPSAIGIERLRYCINALTRMRYLYVDGRLDFDCKQPPENCTNPQLKPWFEFASPLRQSHTLVFGHWAALMGNVGDSK LKALDTGCCWGEHLTLWHLEKDQKITQKKLKKS
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=268, Percent_Identity=47.0149253731343, Blast_Score=261, Evalue=3e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 31128; Mature: 30997
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHYFVGDIQGCFAELQKLLAKVDFNPSRDELWAVGDLVARGPDSLATLRFFRSLGDSAK CCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH TVLGNHDLHLMALHGKLKRAKPSDNLTEILESPDISASIDWLRQQPLMRELPEHQLIMSH HHHCCCCEEEEEECCHHHCCCCCCHHHHHHCCCCCCHHHHHHHCCCHHHHCCHHHHHHHH AGVPPQWSLEVLREEAALVSCALKQDDYLEALISQMYSDSAEQWDPSAIGIERLRYCINA CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHH LTRMRYLYVDGRLDFDCKQPPENCTNPQLKPWFEFASPLRQSHTLVFGHWAALMGNVGDS HHHHHEEEECCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHCCCCCH KLKALDTGCCWGEHLTLWHLEKDQKITQKKLKKS HHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCC >Mature Secondary Structure AHYFVGDIQGCFAELQKLLAKVDFNPSRDELWAVGDLVARGPDSLATLRFFRSLGDSAK CCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH TVLGNHDLHLMALHGKLKRAKPSDNLTEILESPDISASIDWLRQQPLMRELPEHQLIMSH HHHCCCCEEEEEECCHHHCCCCCCHHHHHHCCCCCCHHHHHHHCCCHHHHCCHHHHHHHH AGVPPQWSLEVLREEAALVSCALKQDDYLEALISQMYSDSAEQWDPSAIGIERLRYCINA CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHH LTRMRYLYVDGRLDFDCKQPPENCTNPQLKPWFEFASPLRQSHTLVFGHWAALMGNVGDS HHHHHEEEECCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHCCCCCH KLKALDTGCCWGEHLTLWHLEKDQKITQKKLKKS HHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA