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The map label for this gene is 159901080

Identifier: 159901080

GI number: 159901080

Start: 5846167

End: 5846598

Strand: Direct

Name: 159901080

Synonym: Haur_4568

Alternate gene names: NA

Gene position: 5846167-5846598 (Clockwise)

Preceding gene: 159901077

Following gene: 159901083

Centisome position: 92.12

GC content: 53.47

Gene sequence:

>432_bases
ATGCCAGAATCATTTGGCCAGCGTTTGGGCCGTTTGCGGGCTTTGCATGGCTGGACACAACAAGCCCTTGCTGATCGCTT
GGCGCTTTCGCGGGTGGCGATCTCCCACTTTGAAATGGGTTTGGCCACGCCTTCGGAACGCACGGTTATTCTGCTGGCAG
GCTTGTTTCGGCTCGAACCCCATGAGTTGGTTGCCGATACGTTTTACCCTGAAGGCAAAAGTTTGCGTTTGCCCAGCGTT
GCGCCGCGCTATAGCGAAGTTGAGCTACAACTGGCCTTGTGTGCCCGTGATTTGGCGTGGTGCGAACGTTTGCCAGCAGC
TAGAGCCGAAATGCTACTGCATTGGCAAACCAACTTAGAACAACTCCACCGCAATTGTGTTGATCTGCATGAACGCCAAT
TGATTCAGGCGATGTTAGCCCAACTTAGCTAA

Upstream 100 bases:

>100_bases
GCATAGCTCGATATGGTTGGGGTGGCTGCTAAGTGGCTTAGCAATCACCTTGGCGAATGTGCAGTATCATCAACAGCACC
ATGTTTGGGAGTATTGTTCT

Downstream 100 bases:

>100_bases
ATTATTGTTTGGCAATATCAACAGCTTTTTGGGCTGCGTCGGCCAAGGTTGAAGCTGGAGTTAAGCTGGCATCAGCCAAA
ATGCGTTGGCCTTCGGCTTC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPESFGQRLGRLRALHGWTQQALADRLALSRVAISHFEMGLATPSERTVILLAGLFRLEPHELVADTFYPEGKSLRLPSV
APRYSEVELQLALCARDLAWCERLPAARAEMLLHWQTNLEQLHRNCVDLHERQLIQAMLAQLS

Sequences:

>Translated_143_residues
MPESFGQRLGRLRALHGWTQQALADRLALSRVAISHFEMGLATPSERTVILLAGLFRLEPHELVADTFYPEGKSLRLPSV
APRYSEVELQLALCARDLAWCERLPAARAEMLLHWQTNLEQLHRNCVDLHERQLIQAMLAQLS
>Mature_142_residues
PESFGQRLGRLRALHGWTQQALADRLALSRVAISHFEMGLATPSERTVILLAGLFRLEPHELVADTFYPEGKSLRLPSVA
PRYSEVELQLALCARDLAWCERLPAARAEMLLHWQTNLEQLHRNCVDLHERQLIQAMLAQLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16277; Mature: 16146

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPESFGQRLGRLRALHGWTQQALADRLALSRVAISHFEMGLATPSERTVILLAGLFRLEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHCCH
HELVADTFYPEGKSLRLPSVAPRYSEVELQLALCARDLAWCERLPAARAEMLLHWQTNLE
HHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QLHRNCVDLHERQLIQAMLAQLS
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PESFGQRLGRLRALHGWTQQALADRLALSRVAISHFEMGLATPSERTVILLAGLFRLEP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHCCH
HELVADTFYPEGKSLRLPSVAPRYSEVELQLALCARDLAWCERLPAARAEMLLHWQTNLE
HHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QLHRNCVDLHERQLIQAMLAQLS
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA