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The map label for this gene is ganQ [H]

Identifier: 159901077

GI number: 159901077

Start: 5842737

End: 5843879

Strand: Direct

Name: ganQ [H]

Synonym: Haur_4565

Alternate gene names: 159901077

Gene position: 5842737-5843879 (Clockwise)

Preceding gene: 159901076

Following gene: 159901080

Centisome position: 92.06

GC content: 49.61

Gene sequence:

>1143_bases
ATGGCTAATTCATCTATTGCACAACCGACCAGCCGCAAAGGCCTGTTTGCTCGTGGGCGCGGTGCTGGCCGTCAATTGGA
ATGGTGGCAACAATTGCTGTTGCAAGCCTTTTGCTTGACAGTGGCAGTTTCAGTCTTGTTTCCAATTATGTGGATCGTCA
CGCTTTCGTTCAAGGAAGCAGGTAGTGCCCGACCACTCAAATTGGAAGTTATTCCACCGTCACTTTCATCAATCACATTA
AGCTCCTATCAGGCAGTGATTGAGCAGCCGCTGTCGAAATCGGCAGGTGATATTTCGTTCTGGAAGTTGATGGGCAATAG
CTTTTTCTTGGCAGCAGGGGTCTCGTTCTTCTCGGTGATGATCGGGGTTGCCGCAGCCTATGCCTTCTCGCGCTTGAACT
TCGTCGGACGCAAGTTGATTTTCTTGAGCATTGGCTTTATTTTGCTGATGCCAGGCATTGCCACACTTGCGCCACTTTTT
GCGATGTTGGCTAAAATTAGCACCAGCCTTGAAGTGTTGCGGATCATTTATTTCACGATGGCAGGCTTGTTAATAGCAGG
CTTAGCTTTAATGACGATCTCACGGATTCGTTCCGATGATTTTCGGGCTGGCTCAGCTGCCTTCTTGGTTGGTGGTTTAG
CGGTGGCTGCGCTGTTCTTATGGGGCGGCACGCAGATTGAAATTCCTAAAAATGCCCGACCATTTGAGCTTGGCCGTTCG
CTGTATGGCGTAGGCTTGGCTATGATTTCCGGCGCGTTGCCATTCGCGATCTGGAATCTCAAAGGCTATCTGGATACGAT
TCCCAAGGAGTTGGAAGAAGCCGCGATTATTGACGGCGCTTCACCCAACCAAATCTTCTTCCGAATTATTCTGCCGTTGG
CAACCCCAGCCTTAGCCGTAACTGCCTTCTTGGGCTTTATGGCTGGCTGGACAGAGTTTGCTTTGACCGCACGCTTTATC
AACAAGGCCGACAATTATACCTTGGCAATTGCTCTGCAAACCATGACCGGCCAATATGCCACGGTTTCTTGGTCGAATTT
TGCGGCGATGTCGATTATGATTTCGCTGCCGGTCTCGATTGTCTATCTAGCGTTGCAAAAATATATCGTTGGCGGCTTAA
CCTTGGGCGGGGTAAAAGGTTAA

Upstream 100 bases:

>100_bases
TTGTTTGGGATTGGGGCCGCATTTAGCGTCTTTATCTTTATTATTCTTGGCTGTATCTCGGCAATTACCGCCAGAATTTC
ACGAGTAGCGGAGTCATACG

Downstream 100 bases:

>100_bases
TCAGCTTCAGCGGGCTTTTGGTATCGCAAACAAAAAAACCACTCCAGCAATTGGAGTGGTTTTTTCGTGCCAATCAATTG
GCTTATTTGCCAAGGCTTTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MANSSIAQPTSRKGLFARGRGAGRQLEWWQQLLLQAFCLTVAVSVLFPIMWIVTLSFKEAGSARPLKLEVIPPSLSSITL
SSYQAVIEQPLSKSAGDISFWKLMGNSFFLAAGVSFFSVMIGVAAAYAFSRLNFVGRKLIFLSIGFILLMPGIATLAPLF
AMLAKISTSLEVLRIIYFTMAGLLIAGLALMTISRIRSDDFRAGSAAFLVGGLAVAALFLWGGTQIEIPKNARPFELGRS
LYGVGLAMISGALPFAIWNLKGYLDTIPKELEEAAIIDGASPNQIFFRIILPLATPALAVTAFLGFMAGWTEFALTARFI
NKADNYTLAIALQTMTGQYATVSWSNFAAMSIMISLPVSIVYLALQKYIVGGLTLGGVKG

Sequences:

>Translated_380_residues
MANSSIAQPTSRKGLFARGRGAGRQLEWWQQLLLQAFCLTVAVSVLFPIMWIVTLSFKEAGSARPLKLEVIPPSLSSITL
SSYQAVIEQPLSKSAGDISFWKLMGNSFFLAAGVSFFSVMIGVAAAYAFSRLNFVGRKLIFLSIGFILLMPGIATLAPLF
AMLAKISTSLEVLRIIYFTMAGLLIAGLALMTISRIRSDDFRAGSAAFLVGGLAVAALFLWGGTQIEIPKNARPFELGRS
LYGVGLAMISGALPFAIWNLKGYLDTIPKELEEAAIIDGASPNQIFFRIILPLATPALAVTAFLGFMAGWTEFALTARFI
NKADNYTLAIALQTMTGQYATVSWSNFAAMSIMISLPVSIVYLALQKYIVGGLTLGGVKG
>Mature_379_residues
ANSSIAQPTSRKGLFARGRGAGRQLEWWQQLLLQAFCLTVAVSVLFPIMWIVTLSFKEAGSARPLKLEVIPPSLSSITLS
SYQAVIEQPLSKSAGDISFWKLMGNSFFLAAGVSFFSVMIGVAAAYAFSRLNFVGRKLIFLSIGFILLMPGIATLAPLFA
MLAKISTSLEVLRIIYFTMAGLLIAGLALMTISRIRSDDFRAGSAAFLVGGLAVAALFLWGGTQIEIPKNARPFELGRSL
YGVGLAMISGALPFAIWNLKGYLDTIPKELEEAAIIDGASPNQIFFRIILPLATPALAVTAFLGFMAGWTEFALTARFIN
KADNYTLAIALQTMTGQYATVSWSNFAAMSIMISLPVSIVYLALQKYIVGGLTLGGVKG

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=150, Percent_Identity=40.6666666666667, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1787571, Length=137, Percent_Identity=40.1459854014599, Blast_Score=102, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40856; Mature: 40725

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSSIAQPTSRKGLFARGRGAGRQLEWWQQLLLQAFCLTVAVSVLFPIMWIVTLSFKEA
CCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSARPLKLEVIPPSLSSITLSSYQAVIEQPLSKSAGDISFWKLMGNSFFLAAGVSFFSVM
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEHHHHHHHHHHH
IGVAAAYAFSRLNFVGRKLIFLSIGFILLMPGIATLAPLFAMLAKISTSLEVLRIIYFTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLLIAGLALMTISRIRSDDFRAGSAAFLVGGLAVAALFLWGGTQIEIPKNARPFELGRS
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHH
LYGVGLAMISGALPFAIWNLKGYLDTIPKELEEAAIIDGASPNQIFFRIILPLATPALAV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
TAFLGFMAGWTEFALTARFINKADNYTLAIALQTMTGQYATVSWSNFAAMSIMISLPVSI
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHH
VYLALQKYIVGGLTLGGVKG
HHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ANSSIAQPTSRKGLFARGRGAGRQLEWWQQLLLQAFCLTVAVSVLFPIMWIVTLSFKEA
CCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSARPLKLEVIPPSLSSITLSSYQAVIEQPLSKSAGDISFWKLMGNSFFLAAGVSFFSVM
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEHHHHHHHHHHH
IGVAAAYAFSRLNFVGRKLIFLSIGFILLMPGIATLAPLFAMLAKISTSLEVLRIIYFTM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLLIAGLALMTISRIRSDDFRAGSAAFLVGGLAVAALFLWGGTQIEIPKNARPFELGRS
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHH
LYGVGLAMISGALPFAIWNLKGYLDTIPKELEEAAIIDGASPNQIFFRIILPLATPALAV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
TAFLGFMAGWTEFALTARFINKADNYTLAIALQTMTGQYATVSWSNFAAMSIMISLPVSI
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHH
VYLALQKYIVGGLTLGGVKG
HHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]