Click here to switch to the map view.

The map label for this gene is yrrL [H]

Identifier: 159900980

GI number: 159900980

Start: 5713299

End: 5714372

Strand: Direct

Name: yrrL [H]

Synonym: Haur_4467

Alternate gene names: 159900980

Gene position: 5713299-5714372 (Clockwise)

Preceding gene: 159900978

Following gene: 159900981

Centisome position: 90.02

GC content: 50.09

Gene sequence:

>1074_bases
GTGAGACGTTTAATTCGAGCTTTGTTGATTGTTGCCACCATCGGCGCACTAGTTGTCGCGTGTGTTGCAACCCTGTTTCT
GCGTGAGTTAACCCAGCCTGCTGGCGAGAGCAATATTGCCCAAGATTTTACCATCGCTCCCAGCGAAAGTTTGGCGGTGA
TCAGCAGCAATCTGGAATCTGAAGGTTTGGTGCGGCGGGCAATTGTTTTCCGCGTATTCGCCGATTTACGTAATGCCGAG
ACCGATTTGTATCCTGGCACCTACAAAATTAGCCCAAATATGACGATCAATCAGATTTTAGAGATGTTTCGGGTTGCCCC
AGAAGTTCAAACTGCGGTGCGCTTTACCGTGCCTGAAGGCTTGCGGATTGAAGAAATCGCGGCGGTGATTGAATCGACTG
GCGTAGTTAGTGCCGATGATTTCTTGGCTGTGGCCCGCGATGGCTCGCAATTTAAGGCCGATTATAGCTTTTTATCCAGC
TTGCCAGATAGCGCAACCTTGGAAGGCTATCTCTTCCCTGATACCTATGAAATCTTTTCTGATGCAACCAGCGAAGAGAT
TATTCGCAAAATGCTCGATACCTTTGCAATTCGCTGGGCTGATTCGCCGCTGAGCAGCGCCACGACCGGGCGTTCTGTCC
ATGAAGTGGTGACTTTAGCCTCGATTGTGCAGCGTGAAGCCAGCAATAACGAAGAAATGCCACGGATTGCTGCCGCCTTC
TGGAATCGCCTGAAACCAGAATTTGCTGGCAATCAGCTGGGAGCCGATCCGACAATTCAATATATTTTAGGCGAATCAGG
CAATTGGTGGCCAAAGCTTGATCAGCTAACGGTTGAACAAATTAATAGTGCTGCTGGCCCTTATAACACACGGGTCAACC
CCGGCTTGCCACCTGGGCCAATTAGTGCGCCTGGTTTGTTTGCCTTGCAAGCCGCTGCCTCGCCTGCCGCCGAAGATGTG
ACCTATTTTGTGACCAAGTGTGTGGCTGCTGGCGAACGCCCAACCCACAACTTTACCAACGACTATAGCGAATTTTTGCA
ATTTCAAGAAGAGTTTTTGGCGTGTCCCAAATAG

Upstream 100 bases:

>100_bases
CAAATAGATAACGCAAGGCTATAATAGCCAAGGTTTTGAGGCTTGCTATCGACGATTGTTGGCATGCGCCAACGCTACCT
ATAGATAATAAGGGATGCTT

Downstream 100 bases:

>100_bases
CTGCGCTTGGTATCATTGGCGATCCAGTCGCCCATAGTCTTTCGCCTGCAATGCACAATGCTGCTTTGCAGGCGCTTGGC
ATTAATCAGCAGTATGATCG

Product: aminodeoxychorismate lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MRRLIRALLIVATIGALVVACVATLFLRELTQPAGESNIAQDFTIAPSESLAVISSNLESEGLVRRAIVFRVFADLRNAE
TDLYPGTYKISPNMTINQILEMFRVAPEVQTAVRFTVPEGLRIEEIAAVIESTGVVSADDFLAVARDGSQFKADYSFLSS
LPDSATLEGYLFPDTYEIFSDATSEEIIRKMLDTFAIRWADSPLSSATTGRSVHEVVTLASIVQREASNNEEMPRIAAAF
WNRLKPEFAGNQLGADPTIQYILGESGNWWPKLDQLTVEQINSAAGPYNTRVNPGLPPGPISAPGLFALQAAASPAAEDV
TYFVTKCVAAGERPTHNFTNDYSEFLQFQEEFLACPK

Sequences:

>Translated_357_residues
MRRLIRALLIVATIGALVVACVATLFLRELTQPAGESNIAQDFTIAPSESLAVISSNLESEGLVRRAIVFRVFADLRNAE
TDLYPGTYKISPNMTINQILEMFRVAPEVQTAVRFTVPEGLRIEEIAAVIESTGVVSADDFLAVARDGSQFKADYSFLSS
LPDSATLEGYLFPDTYEIFSDATSEEIIRKMLDTFAIRWADSPLSSATTGRSVHEVVTLASIVQREASNNEEMPRIAAAF
WNRLKPEFAGNQLGADPTIQYILGESGNWWPKLDQLTVEQINSAAGPYNTRVNPGLPPGPISAPGLFALQAAASPAAEDV
TYFVTKCVAAGERPTHNFTNDYSEFLQFQEEFLACPK
>Mature_357_residues
MRRLIRALLIVATIGALVVACVATLFLRELTQPAGESNIAQDFTIAPSESLAVISSNLESEGLVRRAIVFRVFADLRNAE
TDLYPGTYKISPNMTINQILEMFRVAPEVQTAVRFTVPEGLRIEEIAAVIESTGVVSADDFLAVARDGSQFKADYSFLSS
LPDSATLEGYLFPDTYEIFSDATSEEIIRKMLDTFAIRWADSPLSSATTGRSVHEVVTLASIVQREASNNEEMPRIAAAF
WNRLKPEFAGNQLGADPTIQYILGESGNWWPKLDQLTVEQINSAAGPYNTRVNPGLPPGPISAPGLFALQAAASPAAEDV
TYFVTKCVAAGERPTHNFTNDYSEFLQFQEEFLACPK

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=324, Percent_Identity=26.8518518518519, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 39040; Mature: 39040

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLIRALLIVATIGALVVACVATLFLRELTQPAGESNIAQDFTIAPSESLAVISSNLES
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHCCCH
EGLVRRAIVFRVFADLRNAETDLYPGTYKISPNMTINQILEMFRVAPEVQTAVRFTVPEG
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCHHHHHHEEEECCCC
LRIEEIAAVIESTGVVSADDFLAVARDGSQFKADYSFLSSLPDSATLEGYLFPDTYEIFS
CCHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHC
DATSEEIIRKMLDTFAIRWADSPLSSATTGRSVHEVVTLASIVQREASNNEEMPRIAAAF
CCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
WNRLKPEFAGNQLGADPTIQYILGESGNWWPKLDQLTVEQINSAAGPYNTRVNPGLPPGP
HHHCCCHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ISAPGLFALQAAASPAAEDVTYFVTKCVAAGERPTHNFTNDYSEFLQFQEEFLACPK
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRLIRALLIVATIGALVVACVATLFLRELTQPAGESNIAQDFTIAPSESLAVISSNLES
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHCCCH
EGLVRRAIVFRVFADLRNAETDLYPGTYKISPNMTINQILEMFRVAPEVQTAVRFTVPEG
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCHHHHHHEEEECCCC
LRIEEIAAVIESTGVVSADDFLAVARDGSQFKADYSFLSSLPDSATLEGYLFPDTYEIFS
CCHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHC
DATSEEIIRKMLDTFAIRWADSPLSSATTGRSVHEVVTLASIVQREASNNEEMPRIAAAF
CCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
WNRLKPEFAGNQLGADPTIQYILGESGNWWPKLDQLTVEQINSAAGPYNTRVNPGLPPGP
HHHCCCHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ISAPGLFALQAAASPAAEDVTYFVTKCVAAGERPTHNFTNDYSEFLQFQEEFLACPK
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]