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The map label for this gene is 159900978

Identifier: 159900978

GI number: 159900978

Start: 5709685

End: 5711124

Strand: Direct

Name: 159900978

Synonym: Haur_4465

Alternate gene names: NA

Gene position: 5709685-5711124 (Clockwise)

Preceding gene: 159900977

Following gene: 159900980

Centisome position: 89.96

GC content: 52.92

Gene sequence:

>1440_bases
ATGTTTGCAACGTTTGATCAGCGGCGGCGGCGTGAATTTGGCTTGATTGTTGGCGGCACATTAGTTGGCATGGGCTTAGG
CGCTGCTGCCGCGTTTGTGCCGAGCTTTTTGGTCGTCGCTGGTTTGGTGGCGTTGTTGGTCGGGGCATGGTTTGCCCGTT
CGATCCACTCGATGCTGACGGCCACCGTGTTGGTGGCAACGCTCTTACCATTTGGCACCTTGCCTTTCAAAGTTGGGCTA
ACTCCAGCCTTGCTCGAACTAGCATTATTGGCGCTGTATGCCATGTTGGTGGTGCGCAGCTTGGCCGACCCTGAGCGTAC
TTGGCGTTGGGGCAGCCTAGCCCCATGGGTGATTTTGCTGCTAGCTAGTTCGTTTTTCTCCTTCATCATTGGCTCGAATG
GCTCGCCCGATAGTTTGCTGCTGCATAATTATTTCAAATTGCTGCTAGGGATTTGCTTGTTTTTGGGGGTGCAAAATGCG
CTTGATTCACTAGAACAGGCGCGTTGGTGGCTGCGCTTGCTGATTTTGGCTGGCTGGGCGGCGGCATTGTTAGGCATTGG
TTTGCGCTTTGCCCCCGACGCTATGGCTTTGCGCTTTTTGACCGCACTTGCTCCGCTGGGTTATCCGGCGAGTGGTCGGG
TGTTACGCTATGTTGAAGATGACCCCAGCGGCTTTGAGCGAGCAATTGGTACTTCGGTTGATCCCAATGGCTTTGGTGGG
ATGATGGCCTTGCTAGGAGCGATTGCGCTTGGTCAAGCCTTGGCCCAGCGCCCAGTCTTAGGCCGTAAATGGCTATGGCT
GATCACCGCTAGTTTTGCTTTGGCTGTATTTTTGACATCCTCACGGGCTGCCTTGGGTGGCTTTATGATCGCCGGCTTAT
TTTTGGCAACCGTGCGCTATCGCCAATTGTGGTGGCTGATTGGCGCTGGCGGTCTTGCTGGCGCAATCGCGATTGTGGGC
TTGGGCAAGGGTGGCGATTTTGTCGAGCGGATCGTCGAAGGCATTCAATTCAAAGATCAAGCCAACCAAATGCGCTTGGC
TGAGTTTCGCAATGCAATCGCGATTATACGCGAGTATCCGGTGTTTGGGGTGGGTTTTGGTCGCGCACCCAACATTGATC
TCACAACTGGTGTGAGTAGTGTCTATTTGGCGCTTGGCTCGCGTATGGGTTTGGTTGGCTTAGGCCTCTATATTTTAACT
GCACTGGCCTTTTTGGTGCTTACCACTCAGGCTGCACGCCGCTGTGAACGCTCGGTAAGCGATGCAATTATTGGTTTGCA
GGCAGCAATTTTGGCGGCGCTAGCAGTTGGTTTGCTCGATCATTATTTCTTCAATATTGAGTTTCCGCATATGGGGACGC
TATTTTGGGGGGTGGTTGGCTTGGCGATGGTGTTTATGCGCGAGGTAAAGAATGATCAGCTAACTTCATCATTGAAATAA

Upstream 100 bases:

>100_bases
CTCATACTTCGTGCTCTTCGTGCCCTTCGTGGATCAAAAAAAGGATCACCCGATCCCCAACAACCGATCCCCGATCCCCA
GTTATAAAAGGTAGCTTGGT

Downstream 100 bases:

>100_bases
AGCAGCAGAAATTTATTATTTGCGCAGACCCATGGTTCGCCATTCTTTCTGTGTTATCTGAACCCTGAAAGCTGAACCCT
TGTTCACCACCCTTCCGTCC

Product: O-antigen polymerase

Products: NA

Alternate protein names: O-Antigen Polymerase Family

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MFATFDQRRRREFGLIVGGTLVGMGLGAAAAFVPSFLVVAGLVALLVGAWFARSIHSMLTATVLVATLLPFGTLPFKVGL
TPALLELALLALYAMLVVRSLADPERTWRWGSLAPWVILLLASSFFSFIIGSNGSPDSLLLHNYFKLLLGICLFLGVQNA
LDSLEQARWWLRLLILAGWAAALLGIGLRFAPDAMALRFLTALAPLGYPASGRVLRYVEDDPSGFERAIGTSVDPNGFGG
MMALLGAIALGQALAQRPVLGRKWLWLITASFALAVFLTSSRAALGGFMIAGLFLATVRYRQLWWLIGAGGLAGAIAIVG
LGKGGDFVERIVEGIQFKDQANQMRLAEFRNAIAIIREYPVFGVGFGRAPNIDLTTGVSSVYLALGSRMGLVGLGLYILT
ALAFLVLTTQAARRCERSVSDAIIGLQAAILAALAVGLLDHYFFNIEFPHMGTLFWGVVGLAMVFMREVKNDQLTSSLK

Sequences:

>Translated_479_residues
MFATFDQRRRREFGLIVGGTLVGMGLGAAAAFVPSFLVVAGLVALLVGAWFARSIHSMLTATVLVATLLPFGTLPFKVGL
TPALLELALLALYAMLVVRSLADPERTWRWGSLAPWVILLLASSFFSFIIGSNGSPDSLLLHNYFKLLLGICLFLGVQNA
LDSLEQARWWLRLLILAGWAAALLGIGLRFAPDAMALRFLTALAPLGYPASGRVLRYVEDDPSGFERAIGTSVDPNGFGG
MMALLGAIALGQALAQRPVLGRKWLWLITASFALAVFLTSSRAALGGFMIAGLFLATVRYRQLWWLIGAGGLAGAIAIVG
LGKGGDFVERIVEGIQFKDQANQMRLAEFRNAIAIIREYPVFGVGFGRAPNIDLTTGVSSVYLALGSRMGLVGLGLYILT
ALAFLVLTTQAARRCERSVSDAIIGLQAAILAALAVGLLDHYFFNIEFPHMGTLFWGVVGLAMVFMREVKNDQLTSSLK
>Mature_479_residues
MFATFDQRRRREFGLIVGGTLVGMGLGAAAAFVPSFLVVAGLVALLVGAWFARSIHSMLTATVLVATLLPFGTLPFKVGL
TPALLELALLALYAMLVVRSLADPERTWRWGSLAPWVILLLASSFFSFIIGSNGSPDSLLLHNYFKLLLGICLFLGVQNA
LDSLEQARWWLRLLILAGWAAALLGIGLRFAPDAMALRFLTALAPLGYPASGRVLRYVEDDPSGFERAIGTSVDPNGFGG
MMALLGAIALGQALAQRPVLGRKWLWLITASFALAVFLTSSRAALGGFMIAGLFLATVRYRQLWWLIGAGGLAGAIAIVG
LGKGGDFVERIVEGIQFKDQANQMRLAEFRNAIAIIREYPVFGVGFGRAPNIDLTTGVSSVYLALGSRMGLVGLGLYILT
ALAFLVLTTQAARRCERSVSDAIIGLQAAILAALAVGLLDHYFFNIEFPHMGTLFWGVVGLAMVFMREVKNDQLTSSLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51459; Mature: 51459

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFATFDQRRRREFGLIVGGTLVGMGLGAAAAFVPSFLVVAGLVALLVGAWFARSIHSMLT
CCCCHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATVLVATLLPFGTLPFKVGLTPALLELALLALYAMLVVRSLADPERTWRWGSLAPWVILL
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHH
LASSFFSFIIGSNGSPDSLLLHNYFKLLLGICLFLGVQNALDSLEQARWWLRLLILAGWA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALLGIGLRFAPDAMALRFLTALAPLGYPASGRVLRYVEDDPSGFERAIGTSVDPNGFGG
HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCH
MMALLGAIALGQALAQRPVLGRKWLWLITASFALAVFLTSSRAALGGFMIAGLFLATVRY
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RQLWWLIGAGGLAGAIAIVGLGKGGDFVERIVEGIQFKDQANQMRLAEFRNAIAIIREYP
HHHHHHHCCCHHHHHHHHEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
VFGVGFGRAPNIDLTTGVSSVYLALGSRMGLVGLGLYILTALAFLVLTTQAARRCERSVS
EEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAIIGLQAAILAALAVGLLDHYFFNIEFPHMGTLFWGVVGLAMVFMREVKNDQLTSSLK
HHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure
MFATFDQRRRREFGLIVGGTLVGMGLGAAAAFVPSFLVVAGLVALLVGAWFARSIHSMLT
CCCCHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATVLVATLLPFGTLPFKVGLTPALLELALLALYAMLVVRSLADPERTWRWGSLAPWVILL
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHH
LASSFFSFIIGSNGSPDSLLLHNYFKLLLGICLFLGVQNALDSLEQARWWLRLLILAGWA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALLGIGLRFAPDAMALRFLTALAPLGYPASGRVLRYVEDDPSGFERAIGTSVDPNGFGG
HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCH
MMALLGAIALGQALAQRPVLGRKWLWLITASFALAVFLTSSRAALGGFMIAGLFLATVRY
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RQLWWLIGAGGLAGAIAIVGLGKGGDFVERIVEGIQFKDQANQMRLAEFRNAIAIIREYP
HHHHHHHCCCHHHHHHHHEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
VFGVGFGRAPNIDLTTGVSSVYLALGSRMGLVGLGLYILTALAFLVLTTQAARRCERSVS
EEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAIIGLQAAILAALAVGLLDHYFFNIEFPHMGTLFWGVVGLAMVFMREVKNDQLTSSLK
HHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA