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The map label for this gene is 159900947

Identifier: 159900947

GI number: 159900947

Start: 5674199

End: 5675623

Strand: Direct

Name: 159900947

Synonym: Haur_4434

Alternate gene names: NA

Gene position: 5674199-5675623 (Clockwise)

Preceding gene: 159900946

Following gene: 159900948

Centisome position: 89.41

GC content: 53.33

Gene sequence:

>1425_bases
ATGCAGCGTCACGCATTAACTTGGCGCTCCGTGCAGCCATTGGATTGGTTGCTAGCTAGCTTGGGGCTGGCAGGAGTGGC
AATTATTACTCTGCTGCCCTTCACGCAGGCAGCAACCTTGATTATTTGTGGCATGCTGCTAGTTTGCATGCTGATTCAGC
CTGCCGTAGGTTTGAGCCTGACGGTTGCCACGGTCATGCTTCAAGAGTTATTGAGCTTTCCGCTGGGCCTGACCGCCACC
CATGTGATTGGGATTATGGCGCTGGGGGCGTGGTTGCTGTATGGCATGGCGCAGCGCAAAATCATCATCGACACAACTTT
GCTGGTGCCATGGAGCCTGTTTTTGATGGCCTTGCTGCTCTCGGCGGGACTGACCGAATATAACGCGGTTGATGCCTTGA
AGCAGGTGGTGCGTTGGTTTATGGCCTTGCTGGCCTTTGTGGTGACGGTTGCCACAATTACCACGCCCAAACGCGCGATT
GGCCTGATTGCGGTGATGTTCACGGTTGGGGTCATCGAGGCACTGATCGGTATTCAGCAATATCGCGTGGGTGCTGGGCC
ATTTGCCATTGGCGAAACTGTGCGGGCTTATGGCACAATCGGTAAGCCCAACACCTTTGCCGGCTTTTTGGAGTTGATGT
GGCCCATGACTTTGAGTGTAGCCTTGGGCTTGCTCTGGTTTTGGTGGCAGCAGCGCCAACGCTGGCACTATTTAATTGGC
TCGGCCTTGAGTGCTGGCGCAAGCCTGATCATTTTGGCGGCAGTTGGGGTTAGTTTTTCGCGCGGCGCTTGGATTGGCAT
TATGGGTGCGGTGGTGGTGATGCTGCTGGCGGTTGATCGGCGGCGAGCCTTGCCATTAATCGCGCTTGGTGGAATCTTGC
TGTTGGCGATTATCAGCCAACCTGAGCTTTTCCCCCCAGTGATTACCGAGCGAATTAGCAGTCTAACCAACAATTTACGG
ATTTTTGATGCTGGGCGGGTGACGGTTACCGATGAAAATTTTGCGGTTGTCGAACGCATGGCCCATTGGCAAGCGGGGGC
AAATATGTTTTTGGCTCATCCGCTGCTCGGAGTTGGCCCCGACAACTTCAATCGAGCCTATCCCGAATTTTTTGTCGGGC
GCTGGTCGGAATCGCAAGGCCACTCGCACAACTACTACATTCATATTGCGGCAGAAGCTGGCATTTTAGGCTTTGTTGCT
TATCTCGTGCTGATTGCAGCGGTCTATCGTCAAGCCTATTTGGCAATTCAGGCGACGCGCGGCACGGTTTGGCAGATGGT
AGCAATTGGCTGCTGTGGTATCATAACCGCCATTCAATTGCATAATGTTTTCGATAATCTCCATGTGTTGAATTTTGGAA
TTCATTTGAGCGCAGTGTGGGCCTTATGTGTGGTTCTGACACAGCGCCAAGGGTGGCGTGCATGA

Upstream 100 bases:

>100_bases
ACGTAGGCTATTCCAAGCTCCTGAGCATCGGCGTGGATGGCTCGGGCTTTTGGTATGCGATCGATTTGCCGCATTTGCAA
CGAAGAAGCCGAGGAAGGTC

Downstream 100 bases:

>100_bases
CATATTTAGTAACGGGTGGTGCGGGTTTTATTGGCTCGCATTTGTGCGAAACACTGTTGCAGCGTGGCGAACGTGTCATT
GCATTCGATAATTTCAACGA

Product: O-antigen polymerase

Products: NA

Alternate protein names: O-Antigen Polymerase Family

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MQRHALTWRSVQPLDWLLASLGLAGVAIITLLPFTQAATLIICGMLLVCMLIQPAVGLSLTVATVMLQELLSFPLGLTAT
HVIGIMALGAWLLYGMAQRKIIIDTTLLVPWSLFLMALLLSAGLTEYNAVDALKQVVRWFMALLAFVVTVATITTPKRAI
GLIAVMFTVGVIEALIGIQQYRVGAGPFAIGETVRAYGTIGKPNTFAGFLELMWPMTLSVALGLLWFWWQQRQRWHYLIG
SALSAGASLIILAAVGVSFSRGAWIGIMGAVVVMLLAVDRRRALPLIALGGILLLAIISQPELFPPVITERISSLTNNLR
IFDAGRVTVTDENFAVVERMAHWQAGANMFLAHPLLGVGPDNFNRAYPEFFVGRWSESQGHSHNYYIHIAAEAGILGFVA
YLVLIAAVYRQAYLAIQATRGTVWQMVAIGCCGIITAIQLHNVFDNLHVLNFGIHLSAVWALCVVLTQRQGWRA

Sequences:

>Translated_474_residues
MQRHALTWRSVQPLDWLLASLGLAGVAIITLLPFTQAATLIICGMLLVCMLIQPAVGLSLTVATVMLQELLSFPLGLTAT
HVIGIMALGAWLLYGMAQRKIIIDTTLLVPWSLFLMALLLSAGLTEYNAVDALKQVVRWFMALLAFVVTVATITTPKRAI
GLIAVMFTVGVIEALIGIQQYRVGAGPFAIGETVRAYGTIGKPNTFAGFLELMWPMTLSVALGLLWFWWQQRQRWHYLIG
SALSAGASLIILAAVGVSFSRGAWIGIMGAVVVMLLAVDRRRALPLIALGGILLLAIISQPELFPPVITERISSLTNNLR
IFDAGRVTVTDENFAVVERMAHWQAGANMFLAHPLLGVGPDNFNRAYPEFFVGRWSESQGHSHNYYIHIAAEAGILGFVA
YLVLIAAVYRQAYLAIQATRGTVWQMVAIGCCGIITAIQLHNVFDNLHVLNFGIHLSAVWALCVVLTQRQGWRA
>Mature_474_residues
MQRHALTWRSVQPLDWLLASLGLAGVAIITLLPFTQAATLIICGMLLVCMLIQPAVGLSLTVATVMLQELLSFPLGLTAT
HVIGIMALGAWLLYGMAQRKIIIDTTLLVPWSLFLMALLLSAGLTEYNAVDALKQVVRWFMALLAFVVTVATITTPKRAI
GLIAVMFTVGVIEALIGIQQYRVGAGPFAIGETVRAYGTIGKPNTFAGFLELMWPMTLSVALGLLWFWWQQRQRWHYLIG
SALSAGASLIILAAVGVSFSRGAWIGIMGAVVVMLLAVDRRRALPLIALGGILLLAIISQPELFPPVITERISSLTNNLR
IFDAGRVTVTDENFAVVERMAHWQAGANMFLAHPLLGVGPDNFNRAYPEFFVGRWSESQGHSHNYYIHIAAEAGILGFVA
YLVLIAAVYRQAYLAIQATRGTVWQMVAIGCCGIITAIQLHNVFDNLHVLNFGIHLSAVWALCVVLTQRQGWRA

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51754; Mature: 51754

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRHALTWRSVQPLDWLLASLGLAGVAIITLLPFTQAATLIICGMLLVCMLIQPAVGLSL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
TVATVMLQELLSFPLGLTATHVIGIMALGAWLLYGMAQRKIIIDTTLLVPWSLFLMALLL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHH
SAGLTEYNAVDALKQVVRWFMALLAFVVTVATITTPKRAIGLIAVMFTVGVIEALIGIQQ
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
YRVGAGPFAIGETVRAYGTIGKPNTFAGFLELMWPMTLSVALGLLWFWWQQRQRWHYLIG
HHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALSAGASLIILAAVGVSFSRGAWIGIMGAVVVMLLAVDRRRALPLIALGGILLLAIISQ
HHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PELFPPVITERISSLTNNLRIFDAGRVTVTDENFAVVERMAHWQAGANMFLAHPLLGVGP
CCCCCHHHHHHHHHHHCCCEEEECCEEEEECCHHHHHHHHHHHHCCCCEEECCCCCCCCC
DNFNRAYPEFFVGRWSESQGHSHNYYIHIAAEAGILGFVAYLVLIAAVYRQAYLAIQATR
CCCCCCCHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEECC
GTVWQMVAIGCCGIITAIQLHNVFDNLHVLNFGIHLSAVWALCVVLTQRQGWRA
CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQRHALTWRSVQPLDWLLASLGLAGVAIITLLPFTQAATLIICGMLLVCMLIQPAVGLSL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
TVATVMLQELLSFPLGLTATHVIGIMALGAWLLYGMAQRKIIIDTTLLVPWSLFLMALLL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHH
SAGLTEYNAVDALKQVVRWFMALLAFVVTVATITTPKRAIGLIAVMFTVGVIEALIGIQQ
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
YRVGAGPFAIGETVRAYGTIGKPNTFAGFLELMWPMTLSVALGLLWFWWQQRQRWHYLIG
HHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALSAGASLIILAAVGVSFSRGAWIGIMGAVVVMLLAVDRRRALPLIALGGILLLAIISQ
HHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PELFPPVITERISSLTNNLRIFDAGRVTVTDENFAVVERMAHWQAGANMFLAHPLLGVGP
CCCCCHHHHHHHHHHHCCCEEEECCEEEEECCHHHHHHHHHHHHCCCCEEECCCCCCCCC
DNFNRAYPEFFVGRWSESQGHSHNYYIHIAAEAGILGFVAYLVLIAAVYRQAYLAIQATR
CCCCCCCHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEECC
GTVWQMVAIGCCGIITAIQLHNVFDNLHVLNFGIHLSAVWALCVVLTQRQGWRA
CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA