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The map label for this gene is epsD [H]

Identifier: 159899874

GI number: 159899874

Start: 4235142

End: 4236308

Strand: Direct

Name: epsD [H]

Synonym: Haur_3357

Alternate gene names: 159899874

Gene position: 4235142-4236308 (Clockwise)

Preceding gene: 159899873

Following gene: 159899878

Centisome position: 66.73

GC content: 49.44

Gene sequence:

>1167_bases
ATGCGTAAAATAACTGTCGCTCAAGTGATTACCGGCTTTGCGAGTGCCGAAGGTGCTGGCGGCTCAGCCTTATTTGGCAT
CGAAGTAGCACGAGCTTTAGATAAAAGCCGTTTTCGGCCAATTTTGTGTGGAATTCATCGGTTTAATGCACCTTCGGAGC
AGCGTTGGCTCAAAACCTTGGCCGATGAGGGCATTGAAACCAGAATTATGGTGCAAGAACGCAGCAAATTGCGCTACGAT
ATGGTGCGCTTCAGTGCGTTGCTCAATCAACTGATTCAAGCACAAGCCGTTGATATCATTCACACCCATGTTGAGCGAGT
TGAATTTTTCATTAGTTTGCAAAAATTACTCCACCCCAGCCACTATCCCAAACTTGTCCGCACCATTCATGTCAATGCCA
TGTGGGTTACGCGGCCATTAGTACGACGCTTGATGAACATTGTCTACACCCAACTATTTGGCGAGGAAATCGCAATTTCC
CAAGCCACCAAAACCATGCTTGATCAACGCATGGCAGCCAAGGTCTTTGGGCGCTCGGCCAGCTTAATTCAAAATAGCCT
ACCGCTCGCACGCCTGCAAAAATTCGATCTACCCAAACAGCACCAGCGATTTAGCCCACCCCGTTTTTTAGTGATTGGCC
GGCTAGAAATCCAAAAAGCTCAAGATATTTTTATTCAAGCGGCGGCGTTGGTGTTGCAACAATACCCTGAAGCCGAGTTT
TGGTTGGCAGGCGAAGGCACCCAAGAGGCCAATTTTCGCCAATTGACGGCCAATTTAGCGATTGAGCATGCAGTTAAATT
CCTTGGGCCACGCGGTGATATTCCCGAAGTGTTGAGCCAAGTCGATGTGCTGGTCTCAACCTCACGCTGGGAAGGCTTTG
CAACGGTAATTTTAGAGGCAATGGCAGCACGCACGCCAGTGATTGCTACCGATATTGGCGGCAATAACGAACAAATCGTT
GATGGCGAAAATGGGCGTTTGGTCGCAAGCGAAAATCCTAGCGCAGTCGCCGATGCCATGATCTGGATGCTTGAACATCC
TCAAGCAACTGCGCTGATGGCACAGCGCGGCTACGAATGGGGGCAGCAGTTTACGATGGAACGCACTGCTGCCCAGTATG
GCGAACTGTACGAGCGTTTGCTTAGGGAGCAAAAATATCGACCTTAA

Upstream 100 bases:

>100_bases
GCAGCAGCATTCCCGCCTTGCAAAGCCAACTTGAACGTTTGCCCAAGCAGATTCGGGCGGCGGTTGGCGATTGGTTACGA
GGAGCAAAGTAGCAAATTGT

Downstream 100 bases:

>100_bases
GTGGGCCTAAATCAAGCTTTTGATCAACCTTGGCATCAATTACCATGGTTACTTGGTCAGGGCCAAGCAAAATTTTATAA
TTGCTATAAACATCGCCTAC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRKITVAQVITGFASAEGAGGSALFGIEVARALDKSRFRPILCGIHRFNAPSEQRWLKTLADEGIETRIMVQERSKLRYD
MVRFSALLNQLIQAQAVDIIHTHVERVEFFISLQKLLHPSHYPKLVRTIHVNAMWVTRPLVRRLMNIVYTQLFGEEIAIS
QATKTMLDQRMAAKVFGRSASLIQNSLPLARLQKFDLPKQHQRFSPPRFLVIGRLEIQKAQDIFIQAAALVLQQYPEAEF
WLAGEGTQEANFRQLTANLAIEHAVKFLGPRGDIPEVLSQVDVLVSTSRWEGFATVILEAMAARTPVIATDIGGNNEQIV
DGENGRLVASENPSAVADAMIWMLEHPQATALMAQRGYEWGQQFTMERTAAQYGELYERLLREQKYRP

Sequences:

>Translated_388_residues
MRKITVAQVITGFASAEGAGGSALFGIEVARALDKSRFRPILCGIHRFNAPSEQRWLKTLADEGIETRIMVQERSKLRYD
MVRFSALLNQLIQAQAVDIIHTHVERVEFFISLQKLLHPSHYPKLVRTIHVNAMWVTRPLVRRLMNIVYTQLFGEEIAIS
QATKTMLDQRMAAKVFGRSASLIQNSLPLARLQKFDLPKQHQRFSPPRFLVIGRLEIQKAQDIFIQAAALVLQQYPEAEF
WLAGEGTQEANFRQLTANLAIEHAVKFLGPRGDIPEVLSQVDVLVSTSRWEGFATVILEAMAARTPVIATDIGGNNEQIV
DGENGRLVASENPSAVADAMIWMLEHPQATALMAQRGYEWGQQFTMERTAAQYGELYERLLREQKYRP
>Mature_388_residues
MRKITVAQVITGFASAEGAGGSALFGIEVARALDKSRFRPILCGIHRFNAPSEQRWLKTLADEGIETRIMVQERSKLRYD
MVRFSALLNQLIQAQAVDIIHTHVERVEFFISLQKLLHPSHYPKLVRTIHVNAMWVTRPLVRRLMNIVYTQLFGEEIAIS
QATKTMLDQRMAAKVFGRSASLIQNSLPLARLQKFDLPKQHQRFSPPRFLVIGRLEIQKAQDIFIQAAALVLQQYPEAEF
WLAGEGTQEANFRQLTANLAIEHAVKFLGPRGDIPEVLSQVDVLVSTSRWEGFATVILEAMAARTPVIATDIGGNNEQIV
DGENGRLVASENPSAVADAMIWMLEHPQATALMAQRGYEWGQQFTMERTAAQYGELYERLLREQKYRP

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43877; Mature: 43877

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKITVAQVITGFASAEGAGGSALFGIEVARALDKSRFRPILCGIHRFNAPSEQRWLKTL
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
ADEGIETRIMVQERSKLRYDMVRFSALLNQLIQAQAVDIIHTHVERVEFFISLQKLLHPS
HHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HYPKLVRTIHVNAMWVTRPLVRRLMNIVYTQLFGEEIAISQATKTMLDQRMAAKVFGRSA
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SLIQNSLPLARLQKFDLPKQHQRFSPPRFLVIGRLEIQKAQDIFIQAAALVLQQYPEAEF
HHHHHCCCHHHHHHCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCE
WLAGEGTQEANFRQLTANLAIEHAVKFLGPRGDIPEVLSQVDVLVSTSRWEGFATVILEA
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
MAARTPVIATDIGGNNEQIVDGENGRLVASENPSAVADAMIWMLEHPQATALMAQRGYEW
HHHCCCEEEEECCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCHHH
GQQFTMERTAAQYGELYERLLREQKYRP
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKITVAQVITGFASAEGAGGSALFGIEVARALDKSRFRPILCGIHRFNAPSEQRWLKTL
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
ADEGIETRIMVQERSKLRYDMVRFSALLNQLIQAQAVDIIHTHVERVEFFISLQKLLHPS
HHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HYPKLVRTIHVNAMWVTRPLVRRLMNIVYTQLFGEEIAISQATKTMLDQRMAAKVFGRSA
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SLIQNSLPLARLQKFDLPKQHQRFSPPRFLVIGRLEIQKAQDIFIQAAALVLQQYPEAEF
HHHHHCCCHHHHHHCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCE
WLAGEGTQEANFRQLTANLAIEHAVKFLGPRGDIPEVLSQVDVLVSTSRWEGFATVILEA
EEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
MAARTPVIATDIGGNNEQIVDGENGRLVASENPSAVADAMIWMLEHPQATALMAQRGYEW
HHHCCCEEEEECCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCHHH
GQQFTMERTAAQYGELYERLLREQKYRP
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]