Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899833
Identifier: 159899833
GI number: 159899833
Start: 4180215
End: 4180970
Strand: Direct
Name: 159899833
Synonym: Haur_3316
Alternate gene names: NA
Gene position: 4180215-4180970 (Clockwise)
Preceding gene: 159899832
Following gene: 159899834
Centisome position: 65.87
GC content: 52.91
Gene sequence:
>756_bases ATGATGAAAACCACCCAACCAGCCCATCCTATCGCTTGGACACTCGGCAACCTGCTGCTCTTTTGTGGTATGTATTTGTT GCTGTATGTTGGTGGGATGTACGCTGATGATTTTTATAATCGCTTAGCGGCGCGTGGTGATAGCACGCTGCCAATTGCTG CGCCAATCATCGCCACCCCTGAGCCAGCAATAACGACATTTCAAGCCCCCACGCTCAATCAACAAACTGCCAGCGATCAA CCACCAACGCTGGTTACCAGCGACCACTCCACGATCAGCCGGATTCAAATTCCGCGTATCGAGGTTGATCAAAAGGTGAT CGAGGTAGGTTGGGAATTGCAAGATGACGTAGCAACATGGCAGGTTGCTAAATATGCGGTTGGCCATCATCAAGGTAGCG CCAACCCTGGTGAACCAAGCAATATTGTGCTAGCAGGCCATGTTGGTGGCTCGGCTCCGGTCTTTGATCGTTTGATCGAG ACCCAGCCAGGCGACCAAATTGTGCTCTATAGCAACGGCCAACAATATCTGTATGTGGTGCAATCCAACGAACGGGTGCA AGAAGTTGGCGTTTCGGAAGAACAACGCCTAACCAATGCCGCCTACATGAACCCGACCTCCACCGAAACGATAACCCTGA TCACCTGTTGGCCGCCAGCTGGCCCCAACGCCTTTGACCAGCGGATTATTGTGCGAGCCGTGCCCTACACGATCGCCACC GAGCAACCTGCAGGCAGCAATTGGCAGATGCGCTAA
Upstream 100 bases:
>100_bases ACGCCACGCATTGCCGATATGGGCGTAACCCTGTAAGTTTTAAGGCATTATGGGCGCATTGCCTGTAGTGCCTTTTTAAT TGATTAATGCTCGGTAGCGT
Downstream 100 bases:
>100_bases ATCGATTGCAACAAATTATTATCCCCTGCCGTCAGATGAACAGCTATTGACAATCTTGGTCATCACAAAGGGGCAATAAT ATGACAAAACGAACTTTAGG
Product: peptidase C60 sortase A and B
Products: NA
Alternate protein names: Peptidase
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MMKTTQPAHPIAWTLGNLLLFCGMYLLLYVGGMYADDFYNRLAARGDSTLPIAAPIIATPEPAITTFQAPTLNQQTASDQ PPTLVTSDHSTISRIQIPRIEVDQKVIEVGWELQDDVATWQVAKYAVGHHQGSANPGEPSNIVLAGHVGGSAPVFDRLIE TQPGDQIVLYSNGQQYLYVVQSNERVQEVGVSEEQRLTNAAYMNPTSTETITLITCWPPAGPNAFDQRIIVRAVPYTIAT EQPAGSNWQMR
Sequences:
>Translated_251_residues MMKTTQPAHPIAWTLGNLLLFCGMYLLLYVGGMYADDFYNRLAARGDSTLPIAAPIIATPEPAITTFQAPTLNQQTASDQ PPTLVTSDHSTISRIQIPRIEVDQKVIEVGWELQDDVATWQVAKYAVGHHQGSANPGEPSNIVLAGHVGGSAPVFDRLIE TQPGDQIVLYSNGQQYLYVVQSNERVQEVGVSEEQRLTNAAYMNPTSTETITLITCWPPAGPNAFDQRIIVRAVPYTIAT EQPAGSNWQMR >Mature_251_residues MMKTTQPAHPIAWTLGNLLLFCGMYLLLYVGGMYADDFYNRLAARGDSTLPIAAPIIATPEPAITTFQAPTLNQQTASDQ PPTLVTSDHSTISRIQIPRIEVDQKVIEVGWELQDDVATWQVAKYAVGHHQGSANPGEPSNIVLAGHVGGSAPVFDRLIE TQPGDQIVLYSNGQQYLYVVQSNERVQEVGVSEEQRLTNAAYMNPTSTETITLITCWPPAGPNAFDQRIIVRAVPYTIAT EQPAGSNWQMR
Specific function: Unknown
COG id: COG3764
COG function: function code M; Sortase (surface protein transpeptidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27507; Mature: 27507
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKTTQPAHPIAWTLGNLLLFCGMYLLLYVGGMYADDFYNRLAARGDSTLPIAAPIIATP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECEEECC EPAITTFQAPTLNQQTASDQPPTLVTSDHSTISRIQIPRIEVDQKVIEVGWELQDDVATW CCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHEEECCCCHHHHHHHHHCCCCCCHHHHH QVAKYAVGHHQGSANPGEPSNIVLAGHVGGSAPVFDRLIETQPGDQIVLYSNGQQYLYVV HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEE QSNERVQEVGVSEEQRLTNAAYMNPTSTETITLITCWPPAGPNAFDQRIIVRAVPYTIAT ECCCHHHHCCCCHHHHHHHHEECCCCCCCEEEEEEECCCCCCCHHHCEEEEEECCEEEEC EQPAGSNWQMR CCCCCCCCCCC >Mature Secondary Structure MMKTTQPAHPIAWTLGNLLLFCGMYLLLYVGGMYADDFYNRLAARGDSTLPIAAPIIATP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECEEECC EPAITTFQAPTLNQQTASDQPPTLVTSDHSTISRIQIPRIEVDQKVIEVGWELQDDVATW CCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHEEECCCCHHHHHHHHHCCCCCCHHHHH QVAKYAVGHHQGSANPGEPSNIVLAGHVGGSAPVFDRLIETQPGDQIVLYSNGQQYLYVV HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEE QSNERVQEVGVSEEQRLTNAAYMNPTSTETITLITCWPPAGPNAFDQRIIVRAVPYTIAT ECCCHHHHCCCCHHHHHHHHEECCCCCCCEEEEEEECCCCCCCHHHCEEEEEECCEEEEC EQPAGSNWQMR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA