Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899834
Identifier: 159899834
GI number: 159899834
Start: 4181051
End: 4181569
Strand: Direct
Name: 159899834
Synonym: Haur_3317
Alternate gene names: NA
Gene position: 4181051-4181569 (Clockwise)
Preceding gene: 159899833
Following gene: 159899837
Centisome position: 65.88
GC content: 47.98
Gene sequence:
>519_bases ATGACAAAACGAACTTTAGGCTTGCTTTTGATCGGCGCAGGGATCATTGCATTATTCAGCAATATAGGTAATGGCCTTTT TGGGCGCGACCGATATGAGTATGATCGCGAATGGAACTCAGAAGTGGCCTATGCTGTTTCTCAAGGCGGGGAAGATTTTC ACGAAAACATGGCTGATTTTGAGGCTGAAATGAGCGATCTACAAGCTGAAATGCGCGATGTGCAAAGCGAAATCAATGAA ACTGTTGGCTCAAACTTGCGCGACAGTGGCGCTGAATTCCGCGAAGAAATGGCCAACTTACGCGAAGAAATGCGCGATGT TCAAACTGAAATGCGCGATGCGATGCCAGCCGCACCATGGACCGAGCCACAACCACACTTCCAATATGAGTATCACCATC GTGATGGTTCACCCTTTGGCTTCTTGCTGTTTCCACTCTTACTCGGTGGTGGGATCTTCTTATTGGTTCGTCGTCGCCGC ATGGTCGTTCGTCGTCACCAAGAAATTCATCACTTCTAA
Upstream 100 bases:
>100_bases GCAATTGGCAGATGCGCTAAATCGATTGCAACAAATTATTATCCCCTGCCGTCAGATGAACAGCTATTGACAATCTTGGT CATCACAAAGGGGCAATAAT
Downstream 100 bases:
>100_bases AAAACGTTTTATATAATCAAAAGCCCCGGCAATGACGGTTGCCGGGGCTTTATTGCGCTTAGGAAGAGGCTTGGCAAATT TAGCCCAGCACGCGATTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTKRTLGLLLIGAGIIALFSNIGNGLFGRDRYEYDREWNSEVAYAVSQGGEDFHENMADFEAEMSDLQAEMRDVQSEINE TVGSNLRDSGAEFREEMANLREEMRDVQTEMRDAMPAAPWTEPQPHFQYEYHHRDGSPFGFLLFPLLLGGGIFLLVRRRR MVVRRHQEIHHF
Sequences:
>Translated_172_residues MTKRTLGLLLIGAGIIALFSNIGNGLFGRDRYEYDREWNSEVAYAVSQGGEDFHENMADFEAEMSDLQAEMRDVQSEINE TVGSNLRDSGAEFREEMANLREEMRDVQTEMRDAMPAAPWTEPQPHFQYEYHHRDGSPFGFLLFPLLLGGGIFLLVRRRR MVVRRHQEIHHF >Mature_171_residues TKRTLGLLLIGAGIIALFSNIGNGLFGRDRYEYDREWNSEVAYAVSQGGEDFHENMADFEAEMSDLQAEMRDVQSEINET VGSNLRDSGAEFREEMANLREEMRDVQTEMRDAMPAAPWTEPQPHFQYEYHHRDGSPFGFLLFPLLLGGGIFLLVRRRRM VVRRHQEIHHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19939; Mature: 19808
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRTLGLLLIGAGIIALFSNIGNGLFGRDRYEYDREWNSEVAYAVSQGGEDFHENMADF CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHH EAEMSDLQAEMRDVQSEINETVGSNLRDSGAEFREEMANLREEMRDVQTEMRDAMPAAPW HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TEPQPHFQYEYHHRDGSPFGFLLFPLLLGGGIFLLVRRRRMVVRRHQEIHHF CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKRTLGLLLIGAGIIALFSNIGNGLFGRDRYEYDREWNSEVAYAVSQGGEDFHENMADF CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHH EAEMSDLQAEMRDVQSEINETVGSNLRDSGAEFREEMANLREEMRDVQTEMRDAMPAAPW HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TEPQPHFQYEYHHRDGSPFGFLLFPLLLGGGIFLLVRRRRMVVRRHQEIHHF CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA